BLASTX nr result

ID: Angelica23_contig00017923 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica23_contig00017923
         (308 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003635424.1| PREDICTED: LOW QUALITY PROTEIN: putative rib...    77   1e-12
emb|CAN63032.1| hypothetical protein VITISV_024672 [Vitis vinifera]    76   2e-12
emb|CAN77449.1| hypothetical protein VITISV_016970 [Vitis vinifera]    75   4e-12
emb|CAN76892.1| hypothetical protein VITISV_005356 [Vitis vinifera]    72   5e-11
ref|XP_003598202.1| 60S ribosomal protein L23 [Medicago truncatu...    70   1e-10

>ref|XP_003635424.1| PREDICTED: LOW QUALITY PROTEIN: putative ribonuclease H protein
            At1g65750-like [Vitis vinifera]
          Length = 820

 Score = 77.4 bits (189), Expect = 1e-12
 Identities = 38/97 (39%), Positives = 57/97 (58%)
 Frame = +2

Query: 8    PKLAEAMAFREALSWLKKLKMSKVFVELDSLGVVQAFHQKASDDSYFGSIILDCVSIIKD 187
            PK+ EA+  RE LSW+ +   S++ VE D L VVQA   K+  ++ FG II+DC+ +++ 
Sbjct: 712  PKVVEALGVREVLSWIHERSRSRIVVETDCLRVVQAIQHKSCPNTSFGFIIVDCLDVLQH 771

Query: 188  LRFYEVYFVRRSSNLATHSIAREASSGPNREEWSCVP 298
            L   +V + RRS+N A H +A  A S  +   W   P
Sbjct: 772  LVDVQVVYARRSANSAAHCLANGACSFTSLHIWGYTP 808


>emb|CAN63032.1| hypothetical protein VITISV_024672 [Vitis vinifera]
          Length = 1413

 Score = 76.3 bits (186), Expect = 2e-12
 Identities = 37/98 (37%), Positives = 57/98 (58%)
 Frame = +2

Query: 5    DPKLAEAMAFREALSWLKKLKMSKVFVELDSLGVVQAFHQKASDDSYFGSIILDCVSIIK 184
            D  + EA+  RE LSW+ +   S++ VE+D L VVQA   K+  ++ FG II DC+ +++
Sbjct: 1304 DESVVEALGVREVLSWIHERSRSRIVVEIDCLRVVQAIQHKSCPNTSFGFIIADCLDVLQ 1363

Query: 185  DLRFYEVYFVRRSSNLATHSIAREASSGPNREEWSCVP 298
             L   +V + RRS+N A H +A+ A S  +   W   P
Sbjct: 1364 HLVDVQVVYARRSANSAAHCLAKGAGSFTSLHIWGYTP 1401


>emb|CAN77449.1| hypothetical protein VITISV_016970 [Vitis vinifera]
          Length = 517

 Score = 75.5 bits (184), Expect = 4e-12
 Identities = 41/97 (42%), Positives = 57/97 (58%)
 Frame = +2

Query: 8   PKLAEAMAFREALSWLKKLKMSKVFVELDSLGVVQAFHQKASDDSYFGSIILDCVSIIKD 187
           PK AEA+  REA  WL +L++S V VELD+ GV  +F+ KA D S FG +I DC S+  D
Sbjct: 406 PKXAEALGLREAARWLLELRVSNVIVELDAKGVYDSFYSKALDRSEFGMLIQDCRSLFLD 465

Query: 188 LRFYEVYFVRRSSNLATHSIAREASSGPNREEWSCVP 298
             F  +  V+R +N A  ++A+  SS  +   W   P
Sbjct: 466 QNF-TLCHVKRQANAAADALAKATSSFASPSFWRDAP 501


>emb|CAN76892.1| hypothetical protein VITISV_005356 [Vitis vinifera]
          Length = 1793

 Score = 72.0 bits (175), Expect = 5e-11
 Identities = 36/96 (37%), Positives = 55/96 (57%)
 Frame = +2

Query: 11   KLAEAMAFREALSWLKKLKMSKVFVELDSLGVVQAFHQKASDDSYFGSIILDCVSIIKDL 190
            ++ EA+  RE LSW+ +   S++ VE D L VVQA   K+  +  FG II DC+ +++ L
Sbjct: 1686 EVVEALGVREVLSWIHERSRSRIVVETDCLLVVQAIQHKSCPNMSFGFIIADCLDVLQHL 1745

Query: 191  RFYEVYFVRRSSNLATHSIAREASSGPNREEWSCVP 298
               +V + RRS+N A H +A+ A S  +   W   P
Sbjct: 1746 VDVQVVYARRSANSAAHCLAKGAGSFTSLHIWGYTP 1781


>ref|XP_003598202.1| 60S ribosomal protein L23 [Medicago truncatula]
           gi|355487250|gb|AES68453.1| 60S ribosomal protein L23
           [Medicago truncatula]
          Length = 547

 Score = 70.5 bits (171), Expect = 1e-10
 Identities = 34/82 (41%), Positives = 55/82 (67%)
 Frame = +2

Query: 8   PKLAEAMAFREALSWLKKLKMSKVFVELDSLGVVQAFHQKASDDSYFGSIILDCVSIIKD 187
           P+ AEA+  R+A+ WL +L++S V +ELD   VV + + K ++ + FGSII DC S+++ 
Sbjct: 107 PQEAEAVGLRDAILWLGQLELSNVQLELDCKLVVDSIYDKNNNQAEFGSIIDDCRSLLQQ 166

Query: 188 LRFYEVYFVRRSSNLATHSIAR 253
              +++ FVRR +N+  HS AR
Sbjct: 167 FTNFKISFVRRQANVVAHSFAR 188


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