BLASTX nr result

ID: Angelica23_contig00017912 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica23_contig00017912
         (276 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN68077.1| hypothetical protein VITISV_042019 [Vitis vinifera]    64   1e-08
emb|CCI55439.1| PH01B031C15.22 [Phyllostachys edulis]                  62   6e-08
gb|ABD78322.1| polyprotein [Primula vulgaris]                          61   8e-08
gb|ABA97970.1| retrotransposon protein, putative, unclassified, ...    61   1e-07
gb|ACB28472.1| polyprotein [Ananas comosus]                            61   1e-07

>emb|CAN68077.1| hypothetical protein VITISV_042019 [Vitis vinifera]
          Length = 480

 Score = 64.3 bits (155), Expect = 1e-08
 Identities = 27/68 (39%), Positives = 40/68 (58%)
 Frame = -3

Query: 274 PMQVLVTNGNHLTSKHECVDFSWKVGEHEFHTSIRTLALGSYDLVLGVDWLGSLGPVTFD 95
           PM+  V +G  +TS       +W +   EF   +R + LG YD+VLG+ WL  LGP+ +D
Sbjct: 268 PMKAAVVDGTRITSDATYRQSTWNMQGKEFQVDLRLIPLGGYDMVLGIQWLAELGPILWD 327

Query: 94  FKNMLLQF 71
           FKN+  +F
Sbjct: 328 FKNLRXKF 335


>emb|CCI55439.1| PH01B031C15.22 [Phyllostachys edulis]
          Length = 267

 Score = 61.6 bits (148), Expect = 6e-08
 Identities = 27/69 (39%), Positives = 44/69 (63%)
 Frame = -3

Query: 271 MQVLVTNGNHLTSKHECVDFSWKVGEHEFHTSIRTLALGSYDLVLGVDWLGSLGPVTFDF 92
           + V V NG+H+TS   C      + + +F     T+ L  +D+VLGV WLGSLGP+T+DF
Sbjct: 106 LSVAVANGDHVTSGGICRATLISIDKEDFILDFLTIPLDGFDVVLGVQWLGSLGPITWDF 165

Query: 91  KNMLLQFRK 65
            + +++F++
Sbjct: 166 HHRMMRFQR 174


>gb|ABD78322.1| polyprotein [Primula vulgaris]
          Length = 1359

 Score = 61.2 bits (147), Expect = 8e-08
 Identities = 29/72 (40%), Positives = 39/72 (54%)
 Frame = -3

Query: 271 MQVLVTNGNHLTSKHECVDFSWKVGEHEFHTSIRTLALGSYDLVLGVDWLGSLGPVTFDF 92
           M+V + NG+ + S   C      + E++F      L L  YDLVLGV WL  LG +  DF
Sbjct: 333 MEVKIANGDKIKSSGTCEKVKLLIQENQFEVDFLLLPLVGYDLVLGVHWLSQLGVINCDF 392

Query: 91  KNMLLQFRKGNK 56
           KN+ + F  GNK
Sbjct: 393 KNLTMTFTHGNK 404


>gb|ABA97970.1| retrotransposon protein, putative, unclassified, expressed [Oryza
           sativa Japonica Group]
          Length = 1548

 Score = 60.8 bits (146), Expect = 1e-07
 Identities = 30/68 (44%), Positives = 38/68 (55%)
 Frame = -3

Query: 274 PMQVLVTNGNHLTSKHECVDFSWKVGEHEFHTSIRTLALGSYDLVLGVDWLGSLGPVTFD 95
           P  V V NG  L  + +   F+W V  HEF   +R L +G YDLVLG+DWL    P+T D
Sbjct: 460 PTSVRVANGETLCCEAKVPQFAWWVQGHEFSFPMRVLPMGGYDLVLGMDWLTQFSPMTCD 519

Query: 94  FKNMLLQF 71
           +    LQF
Sbjct: 520 WAAKQLQF 527


>gb|ACB28472.1| polyprotein [Ananas comosus]
          Length = 953

 Score = 60.8 bits (146), Expect = 1e-07
 Identities = 30/76 (39%), Positives = 44/76 (57%), Gaps = 1/76 (1%)
 Frame = -3

Query: 271 MQVLVTNGNHLTSKHECVDFSWKVGEHEFHTSIRTLALGSYDLVLGVDWLGSLGPVTFDF 92
           + V V +GN L S   C  F WK+   EF  ++  L L   D+VLGV WL  LGP+ +DF
Sbjct: 54  VNVTVADGNKLISSSTCRAFKWKMQGLEFKANLLLLPLRGCDMVLGVQWLKQLGPILWDF 113

Query: 91  KNMLLQFR-KGNKLAL 47
             + ++F+ +G K+ L
Sbjct: 114 SKLRMEFQFQGQKIVL 129


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