BLASTX nr result

ID: Angelica23_contig00017825 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica23_contig00017825
         (1009 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001234135.1| SKIP5-like protein [Solanum lycopersicum] gi...   390   e-106
ref|XP_002269519.1| PREDICTED: F-box protein SKIP5 [Vitis vinife...   387   e-105
ref|XP_002513076.1| conserved hypothetical protein [Ricinus comm...   384   e-104
gb|AFK33567.1| unknown [Lotus japonicus]                              380   e-103
ref|XP_002299213.1| f-box family protein [Populus trichocarpa] g...   373   e-101

>ref|NP_001234135.1| SKIP5-like protein [Solanum lycopersicum]
           gi|15777895|gb|AAL05932.1| SKIP5-like protein [Solanum
           lycopersicum]
          Length = 265

 Score =  390 bits (1001), Expect = e-106
 Identities = 187/248 (75%), Positives = 216/248 (87%)
 Frame = +1

Query: 136 RTKLKRLSKTWSDNSHINRLDDGCLMHIFSFLLPIPDRYNTALVCHRWMFLACHPRLWLR 315
           + K +R+SK  +D S IN LDDGCLMHIFSFL PIPDRYNTALVCHRW FLACHPRLWLR
Sbjct: 5   KRKWRRISKISTDISLINSLDDGCLMHIFSFLSPIPDRYNTALVCHRWRFLACHPRLWLR 64

Query: 316 VDRTVKDLSQPGVFPSVEAAVSAARPGDTILIGAGGSHIASNIQIKKPLCLIGGGDVPDE 495
           VDR VKDLSQPGV+P++E AVSAARPGDTILI AGGSH  SNIQI+KPLCLIG G+ PD+
Sbjct: 65  VDRAVKDLSQPGVYPNIEMAVSAARPGDTILIAAGGSHHVSNIQIEKPLCLIGAGESPDD 124

Query: 496 TTLICSRGSESALEFLSTCKLANLTVKAELGCCLLHRSGKLIIDCCFLQCESSPLDYLSY 675
           TTLICSRGS+SALEF+STCKLANLTV+ ELGCCLLHRSGKL +D C LQCES+PLD+LSY
Sbjct: 125 TTLICSRGSDSALEFMSTCKLANLTVRTELGCCLLHRSGKLTVDGCILQCESNPLDHLSY 184

Query: 676 AIISTSNCPKVAPSLPKCCNDGVSVSQTRIEGGAKAVLTSGSLALQRVRVIYSQTSIFFW 855
           AIIST+   +V PS  K C+D VSV +T+I GGAKAVLTSG+L+LQRVRVIY++TS+FFW
Sbjct: 185 AIISTAGAAEVIPSALKTCSDAVSVLKTQIAGGAKAVLTSGTLSLQRVRVIYTRTSLFFW 244

Query: 856 FDVEHQER 879
           F+VE  ++
Sbjct: 245 FEVEGSDK 252


>ref|XP_002269519.1| PREDICTED: F-box protein SKIP5 [Vitis vinifera]
           gi|297742690|emb|CBI35143.3| unnamed protein product
           [Vitis vinifera]
          Length = 254

 Score =  387 bits (993), Expect = e-105
 Identities = 186/235 (79%), Positives = 212/235 (90%)
 Frame = +1

Query: 169 SDNSHINRLDDGCLMHIFSFLLPIPDRYNTALVCHRWMFLACHPRLWLRVDRTVKDLSQP 348
           S++S I+ LDDGCLMHIFSFL PIPDRYNTALVCHRW +LACHPRLWLRVDR+VKD S+P
Sbjct: 20  SNSSSIHNLDDGCLMHIFSFLSPIPDRYNTALVCHRWHYLACHPRLWLRVDRSVKDSSEP 79

Query: 349 GVFPSVEAAVSAARPGDTILIGAGGSHIASNIQIKKPLCLIGGGDVPDETTLICSRGSES 528
           GVFPS+E AVSAARPGDTILI AGGSH+ASNIQIKKPLCLIGGG++PD+TTL+CSRGS+S
Sbjct: 80  GVFPSIEMAVSAARPGDTILIAAGGSHLASNIQIKKPLCLIGGGELPDDTTLLCSRGSDS 139

Query: 529 ALEFLSTCKLANLTVKAELGCCLLHRSGKLIIDCCFLQCESSPLDYLSYAIISTSNCPKV 708
           ALEFLSTCK+ANLTVKAELGCCLLHRSG+L ID C LQCES+PLDYLS  I+ST+  P++
Sbjct: 140 ALEFLSTCKVANLTVKAELGCCLLHRSGRLTIDGCILQCESNPLDYLSCPIVSTAAGPEI 199

Query: 709 APSLPKCCNDGVSVSQTRIEGGAKAVLTSGSLALQRVRVIYSQTSIFFWFDVEHQ 873
             S  K   D VSVS+TRIEGGAKAV+TSGSLALQRVRVIY++TSIFFWFDV+ +
Sbjct: 200 LTSSVKSHGDSVSVSRTRIEGGAKAVVTSGSLALQRVRVIYARTSIFFWFDVDRR 254


>ref|XP_002513076.1| conserved hypothetical protein [Ricinus communis]
           gi|223548087|gb|EEF49579.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 250

 Score =  384 bits (987), Expect = e-104
 Identities = 189/244 (77%), Positives = 207/244 (84%)
 Frame = +1

Query: 142 KLKRLSKTWSDNSHINRLDDGCLMHIFSFLLPIPDRYNTALVCHRWMFLACHPRLWLRVD 321
           K KR  K   DN  IN LDDGCLMHIFSFL PIPDRYNTALVCHRW FLACHPRLWLRVD
Sbjct: 8   KWKRKKKE-GDNCRINNLDDGCLMHIFSFLSPIPDRYNTALVCHRWHFLACHPRLWLRVD 66

Query: 322 RTVKDLSQPGVFPSVEAAVSAARPGDTILIGAGGSHIASNIQIKKPLCLIGGGDVPDETT 501
           R++KD SQPGVFPS+E AVSAARPGDTILI AGGSH+ASNIQI KPLCLIGGG++PDET 
Sbjct: 67  RSIKDTSQPGVFPSIEMAVSAARPGDTILISAGGSHLASNIQINKPLCLIGGGELPDETM 126

Query: 502 LICSRGSESALEFLSTCKLANLTVKAELGCCLLHRSGKLIIDCCFLQCESSPLDYLSYAI 681
           L+CSRGS+SALEFLSTCKLANLTVKAELGCCLLHRSGKL ID C LQCES PLDYLS  I
Sbjct: 127 LLCSRGSDSALEFLSTCKLANLTVKAELGCCLLHRSGKLTIDSCVLQCESDPLDYLSCPI 186

Query: 682 ISTSNCPKVAPSLPKCCNDGVSVSQTRIEGGAKAVLTSGSLALQRVRVIYSQTSIFFWFD 861
           +ST+   +V  +  K   D V+VSQTRIEGGAKAVLT+G L LQRVRVIYS+T ++FWFD
Sbjct: 187 VSTAGKHEVLSAPMKTNGDSVTVSQTRIEGGAKAVLTNGDLVLQRVRVIYSRTYVYFWFD 246

Query: 862 VEHQ 873
           V H+
Sbjct: 247 VGHK 250


>gb|AFK33567.1| unknown [Lotus japonicus]
          Length = 268

 Score =  380 bits (975), Expect = e-103
 Identities = 185/239 (77%), Positives = 208/239 (87%), Gaps = 2/239 (0%)
 Frame = +1

Query: 157 SKTWSDNSHINRLDDGCLMHIFSFLLPIPDRYNTALVCHRWMFLACHPRLWLRVDRTVKD 336
           S + S +SHIN LDDGCLMHIFSFL PIPDR+NTALVCHRW +LACHPRLWLRVDR+VKD
Sbjct: 28  SSSSSSSSHINNLDDGCLMHIFSFLPPIPDRFNTALVCHRWNYLACHPRLWLRVDRSVKD 87

Query: 337 LSQPGVFPSVEAAVSAARPGDTILIGAGGSHIASNIQIKKPLCLIGGGDVPDETTLICSR 516
           LSQPGVFP++E AVSA+RPGDTILI AGGSH  SNIQIKKPLCLIG G++PD+TTLICSR
Sbjct: 88  LSQPGVFPNIETAVSASRPGDTILIAAGGSHHTSNIQIKKPLCLIGAGELPDDTTLICSR 147

Query: 517 GSESALEFLSTCKLANLTVKAELGCCLLHRSGKLIIDCCFLQCESSPLDYLSYAIISTSN 696
           GS+SALE LSTCKLANLTVKAELGCCLLHR G+L +D C LQCES+PLD+LS  I+ST+N
Sbjct: 148 GSDSALELLSTCKLANLTVKAELGCCLLHRKGRLTVDGCILQCESNPLDFLSCPIVSTAN 207

Query: 697 CPKVAPSLPKC--CNDGVSVSQTRIEGGAKAVLTSGSLALQRVRVIYSQTSIFFWFDVE 867
             +V PS  K     DGV VSQTRIEGGAKAV+TSG LALQRVRVIY++TS+ FWFDVE
Sbjct: 208 SSEVLPSQTKSNGGGDGVFVSQTRIEGGAKAVVTSGDLALQRVRVIYARTSLLFWFDVE 266


>ref|XP_002299213.1| f-box family protein [Populus trichocarpa]
           gi|222846471|gb|EEE84018.1| f-box family protein
           [Populus trichocarpa]
          Length = 251

 Score =  373 bits (957), Expect = e-101
 Identities = 182/251 (72%), Positives = 212/251 (84%), Gaps = 2/251 (0%)
 Frame = +1

Query: 127 MDARTKLKRLSKTWSDNSH--INRLDDGCLMHIFSFLLPIPDRYNTALVCHRWMFLACHP 300
           M+ + K K+ +K    +S   IN LDDGCLMHIFSFL PIPDRYNTALVCHRW +LACHP
Sbjct: 1   MEEQGKQKKKNKKPLSSSFCPINNLDDGCLMHIFSFLSPIPDRYNTALVCHRWCYLACHP 60

Query: 301 RLWLRVDRTVKDLSQPGVFPSVEAAVSAARPGDTILIGAGGSHIASNIQIKKPLCLIGGG 480
           RLWLRV+++ KDLS+PGVFPS+E AVSAARPGDTILI AGG H+ASNIQI KPLCLIGGG
Sbjct: 61  RLWLRVEQSAKDLSEPGVFPSIEKAVSAARPGDTILIAAGGRHLASNIQINKPLCLIGGG 120

Query: 481 DVPDETTLICSRGSESALEFLSTCKLANLTVKAELGCCLLHRSGKLIIDCCFLQCESSPL 660
           ++PDETTL+CSRGS+SALEF++TCKLANLTVKAELGCCLLHRSG+L ID C LQCE+SPL
Sbjct: 121 ELPDETTLLCSRGSDSALEFITTCKLANLTVKAELGCCLLHRSGRLTIDSCILQCEASPL 180

Query: 661 DYLSYAIISTSNCPKVAPSLPKCCNDGVSVSQTRIEGGAKAVLTSGSLALQRVRVIYSQT 840
           DYLS  IIST+   +V  S  K   + +SVSQTRIEGGAKAVLTSG L LQ+VRVIY++T
Sbjct: 181 DYLSCPIISTAGGNEVVSSAVKTKGNRISVSQTRIEGGAKAVLTSGDLTLQQVRVIYART 240

Query: 841 SIFFWFDVEHQ 873
            ++FWFDV+ Q
Sbjct: 241 FVYFWFDVDSQ 251


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