BLASTX nr result

ID: Angelica23_contig00017810 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica23_contig00017810
         (1210 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004167357.1| PREDICTED: zinc finger CCCH domain-containin...   425   e-116
ref|XP_004136190.1| PREDICTED: zinc finger CCCH domain-containin...   423   e-116
ref|XP_002277716.2| PREDICTED: zinc finger CCCH domain-containin...   419   e-115
ref|XP_002527651.1| nucleic acid binding protein, putative [Rici...   404   e-110
ref|XP_003516789.1| PREDICTED: zinc finger CCCH domain-containin...   387   e-105

>ref|XP_004167357.1| PREDICTED: zinc finger CCCH domain-containing protein 12-like
            [Cucumis sativus]
          Length = 350

 Score =  425 bits (1092), Expect = e-116
 Identities = 218/320 (68%), Positives = 253/320 (79%), Gaps = 8/320 (2%)
 Frame = -1

Query: 1207 WNR--EASVD--ANSNFDGRQSQTRSGSEPPNKIARISQPDVQSTNRSKAIGKMFFKTKL 1040
            WN   + SVD  +NS++D RQSQ+RSGSEPPNK +R SQ DV S+NRSKAIGKMFFKTKL
Sbjct: 34   WNNGGDGSVDTPSNSSYDQRQSQSRSGSEPPNKKSRSSQ-DVTSSNRSKAIGKMFFKTKL 92

Query: 1039 CCKFRAGTCPYVTNCNFAHSIEELRRPPPNWQEIVAAHEEEQTV-NEPREEFQIPTLGSN 863
            CCKFRAGTCPY+TNCNFAHSIEELRRPP NWQEIVAAHEEE+ V +EPREEFQIP+LG++
Sbjct: 93   CCKFRAGTCPYITNCNFAHSIEELRRPPHNWQEIVAAHEEEKAVLSEPREEFQIPSLGTS 152

Query: 862  AFPVEPQRSSKGRHCKKFFTEEGCPYGENCSFLHDDQSRTRESVAISLXXXXXXXXXXXX 683
             F  E QRS KGRHCKKF+TEEGCPYG++C+FLHD+QS+ RESVAISL            
Sbjct: 153  NFGSESQRSYKGRHCKKFYTEEGCPYGDSCTFLHDEQSKNRESVAISLGPGGYSGGGGGG 212

Query: 682  XXXXXXXXGVSPSTLKPSNWKTRICNKWEQTGFCPFGNKCHFAHGAAELHRYGGGLVEGD 503
                    G + S  KPSNWKTRICNKWE TG+CPFGNKCHFAHGAAELHRYGGGL+E +
Sbjct: 213  GGGGGGGSG-NGSNTKPSNWKTRICNKWELTGYCPFGNKCHFAHGAAELHRYGGGLMETE 271

Query: 502  GKEFS-SPSDMKQGTVPSKSLGDTLVASVPSVPYADGYHMGT-SQR-VPNMTRAGQGLHQ 332
             ++ S +P D+KQG +P K+ GDTLVASVPS P++D YH+   SQR    + R GQ  HQ
Sbjct: 272  TRDSSAAPPDLKQGVLP-KAPGDTLVASVPSAPHSDVYHVVVPSQRSTIVIQRPGQRTHQ 330

Query: 331  KWKGPDKISLIYGDWIEDLE 272
            KWKGPDKIS IYGDWI+D+E
Sbjct: 331  KWKGPDKISRIYGDWIDDIE 350


>ref|XP_004136190.1| PREDICTED: zinc finger CCCH domain-containing protein 12-like
            [Cucumis sativus]
          Length = 339

 Score =  423 bits (1088), Expect = e-116
 Identities = 216/320 (67%), Positives = 251/320 (78%), Gaps = 8/320 (2%)
 Frame = -1

Query: 1207 WNR--EASVD--ANSNFDGRQSQTRSGSEPPNKIARISQPDVQSTNRSKAIGKMFFKTKL 1040
            WN   + SVD  +NS++D RQSQ+RSGSEPPNK +R SQ DV S+NRSKAIGKMFFKTKL
Sbjct: 34   WNNGGDGSVDTPSNSSYDQRQSQSRSGSEPPNKKSRSSQ-DVTSSNRSKAIGKMFFKTKL 92

Query: 1039 CCKFRAGTCPYVTNCNFAHSIEELRRPPPNWQEIVAAHEEEQTV-NEPREEFQIPTLGSN 863
            CCKFRAGTCPY+TNCNFAHSIEELRRPP NWQEIVAAHEEE+ V +EPREEFQIP+LG++
Sbjct: 93   CCKFRAGTCPYITNCNFAHSIEELRRPPHNWQEIVAAHEEEKAVLSEPREEFQIPSLGTS 152

Query: 862  AFPVEPQRSSKGRHCKKFFTEEGCPYGENCSFLHDDQSRTRESVAISLXXXXXXXXXXXX 683
             F  E QRS KGRHCKKF+TEEGCPYG++C+FLHD+QS+ RESVAIS             
Sbjct: 153  NFGSESQRSYKGRHCKKFYTEEGCPYGDSCTFLHDEQSKNRESVAISFGGGGGGGGSG-- 210

Query: 682  XXXXXXXXGVSPSTLKPSNWKTRICNKWEQTGFCPFGNKCHFAHGAAELHRYGGGLVEGD 503
                      + S  KPSNWKTRICNKWE TG+CPFGNKCHFAHGAAELHRYGGGL+E +
Sbjct: 211  ----------NGSNTKPSNWKTRICNKWELTGYCPFGNKCHFAHGAAELHRYGGGLMETE 260

Query: 502  GKEFS-SPSDMKQGTVPSKSLGDTLVASVPSVPYADGYHMGT-SQR-VPNMTRAGQGLHQ 332
             ++ S +P D+KQG +P K+ GDTLVASVPS P++D YH+   SQR    + R GQ  HQ
Sbjct: 261  TRDSSAAPPDLKQGVLP-KAPGDTLVASVPSAPHSDVYHVVVPSQRSTIVIQRPGQRTHQ 319

Query: 331  KWKGPDKISLIYGDWIEDLE 272
            KWKGPDKIS IYGDWI+D+E
Sbjct: 320  KWKGPDKISRIYGDWIDDIE 339


>ref|XP_002277716.2| PREDICTED: zinc finger CCCH domain-containing protein 12-like [Vitis
            vinifera]
          Length = 372

 Score =  419 bits (1077), Expect = e-115
 Identities = 214/335 (63%), Positives = 248/335 (74%), Gaps = 22/335 (6%)
 Frame = -1

Query: 1210 VWNREASVD--ANSNFDGRQSQTRSGSEPPNKIARISQP-DVQS----------TNRSKA 1070
            VWN + S D  +NSN++GRQSQ+RSGSEPPNK +R SQ  D Q           +NRSKA
Sbjct: 38   VWNGDGSGDTPSNSNYEGRQSQSRSGSEPPNKKSRNSQVVDSQGNVFGRDRDLPSNRSKA 97

Query: 1069 IGKMFFKTKLCCKFRAGTCPYVTNCNFAHSIEELRRPPPNWQEIVAAHEEEQTV-NEPRE 893
            IGKMFFKTKLCCKFRAGTCPYVTNCNFAHSI+ELRRPPPNWQEIVAAH+EE+ V +EPRE
Sbjct: 98   IGKMFFKTKLCCKFRAGTCPYVTNCNFAHSIQELRRPPPNWQEIVAAHDEERGVSSEPRE 157

Query: 892  EFQIPTLGSNAFPVEPQRSSKGRHCKKFFTEEGCPYGENCSFLHDDQSRTRESVAISLXX 713
            EFQIP++GS++F VE QRS KGRHCKKF+T+EGCPYG+NC+FLHD+QS+ RESVAISL  
Sbjct: 158  EFQIPSIGSSSFGVETQRSYKGRHCKKFYTDEGCPYGDNCTFLHDEQSKARESVAISLGP 217

Query: 712  XXXXXXXXXXXXXXXXXXGVSPSTLKPSNWKTRICNKWEQTGFCPFGNKCHFAHGAAELH 533
                              G S S +KPSNWKTRICNKWE TG+CPFG+KCHFAHG  ELH
Sbjct: 218  GAGGGGGGGGGGGGGGGGGGSGSNIKPSNWKTRICNKWELTGYCPFGSKCHFAHGMGELH 277

Query: 532  RYGGGLVEGDGKEFSSPSDMKQGTVPSKSLGDTLVA---SVP---SVPYADGYHMGTSQR 371
            RYGGGLV+      S+P D KQG VPSK   D +VA   SVP   SVP++D YH G   +
Sbjct: 278  RYGGGLVDESRDSTSAPPDSKQGGVPSKPPSDAVVAFVTSVPLVASVPHSDVYHAGVPSQ 337

Query: 370  VPN--MTRAGQGLHQKWKGPDKISLIYGDWIEDLE 272
             P   + R GQ   +KWKGPDKIS IYGDWI+D+E
Sbjct: 338  RPTSVIQRPGQRTQKKWKGPDKISRIYGDWIDDIE 372


>ref|XP_002527651.1| nucleic acid binding protein, putative [Ricinus communis]
            gi|223532956|gb|EEF34722.1| nucleic acid binding protein,
            putative [Ricinus communis]
          Length = 349

 Score =  404 bits (1037), Expect = e-110
 Identities = 205/318 (64%), Positives = 237/318 (74%), Gaps = 5/318 (1%)
 Frame = -1

Query: 1210 VWNREASVDANSNFDGRQS-QTRSGSEPPNKIARISQPDVQSTNRSKAIGKMFFKTKLCC 1034
            +WN   S   N N     S Q+RSGSEPPNK ++ +  ++ S    K+IGKMFFKTKLCC
Sbjct: 39   MWNN--SDGPNDNTPSNSSFQSRSGSEPPNKKSKNNSQELSS---KKSIGKMFFKTKLCC 93

Query: 1033 KFRAGTCPYVTNCNFAHSIEELRRPPPNWQEIVAAHEEEQ-TVNEPREEFQIPTLGSNAF 857
            KFRAGTCPY+TNCNFAHSIEELRRPPPNWQEIVAAHEEE+  V E REEFQIP++G   F
Sbjct: 94   KFRAGTCPYITNCNFAHSIEELRRPPPNWQEIVAAHEEERGNVMEVREEFQIPSIG--GF 151

Query: 856  PVEPQRSSKGRHCKKFFTEEGCPYGENCSFLHDDQSRTRESVAISLXXXXXXXXXXXXXX 677
              E QRS KGRHCKKF+TEEGCPYG+NC+FLHD+QS+ RESVAISL              
Sbjct: 152  SGESQRSYKGRHCKKFYTEEGCPYGDNCTFLHDEQSKNRESVAISLGPGGYGGGGGGGAG 211

Query: 676  XXXXXXGVSPSTLKPSNWKTRICNKWEQTGFCPFGNKCHFAHGAAELHRYGGGLVEGDGK 497
                  G S   +KPSNWKTRICNKWE TG+CPFGNKCHFAHGAAELHRYGGGL+E +GK
Sbjct: 212  SGNGSGGGSAGNVKPSNWKTRICNKWELTGYCPFGNKCHFAHGAAELHRYGGGLMESEGK 271

Query: 496  EFSS-PSDMKQGTVPSKSLGDTLVASVPSVPYADGYHMGTSQRVPN--MTRAGQGLHQKW 326
            + SS P+D KQG V SK+  D +VASV SVP++D YH+G   + P+  M R GQ  HQKW
Sbjct: 272  DPSSVPADTKQGGVLSKTPADIVVASVASVPHSDVYHLGVPSQRPSILMQRPGQRSHQKW 331

Query: 325  KGPDKISLIYGDWIEDLE 272
            KGPDKIS IYGDWI+D+E
Sbjct: 332  KGPDKISRIYGDWIDDIE 349


>ref|XP_003516789.1| PREDICTED: zinc finger CCCH domain-containing protein 56-like
            [Glycine max]
          Length = 368

 Score =  387 bits (994), Expect = e-105
 Identities = 202/334 (60%), Positives = 235/334 (70%), Gaps = 22/334 (6%)
 Frame = -1

Query: 1207 WNREAS------VDANSNFDGRQSQTRSGSEPPNKIARISQPDVQSTNRSKAIGKMFFKT 1046
            WN   S        +NSN++GR S      EPP+K +R S  +  S+NRSKAIGKMFFKT
Sbjct: 42   WNNNNSGGDSETTPSNSNYEGRSS------EPPSKKSRNSSQEGSSSNRSKAIGKMFFKT 95

Query: 1045 KLCCKFRAGTCPYVTNCNFAHSIEELRRPPPNWQEIVAAHEEEQTV--NEPREEFQIPTL 872
            KLCCKFRAGTCPY+TNCNFAHSIEELRRPPPNWQEIVAAHEEE+ V    PREEFQIPT+
Sbjct: 96   KLCCKFRAGTCPYITNCNFAHSIEELRRPPPNWQEIVAAHEEEKAVMIEPPREEFQIPTV 155

Query: 871  GSNAFPVE-PQRSSKGRHCKKFFTEEGCPYGENCSFLHDDQSRTRESVAISLXXXXXXXX 695
            GS  F  E  QRS KGRHCKKF+TEEGCPYG++C+FLHD+QS+ RESVAISL        
Sbjct: 156  GSTTFSGEMMQRSYKGRHCKKFYTEEGCPYGDSCTFLHDEQSKNRESVAISLGPGGYGGG 215

Query: 694  XXXXXXXXXXXXGVSPS--------TLKPSNWKTRICNKWEQTGFCPFGNKCHFAHGAAE 539
                        G +            KPSNWKTRICNKWE TG+CPFGNKCHFAHGA E
Sbjct: 216  GGGGGGVGGGASGGNGGANAAGNGPNSKPSNWKTRICNKWEMTGYCPFGNKCHFAHGATE 275

Query: 538  LHRYGGGLVEGDGKEFSS--PSDMKQGTVPSKSLGDTLVASVPSVPYADGYHMGT-SQRV 368
            LHRYGGGL+EG+ ++ +S    D  +G VPSK+  D +VA+V  V ++D YH+G  SQR 
Sbjct: 276  LHRYGGGLMEGENRDAASAVAGDTNKG-VPSKASADNVVAAVTLVAHSDVYHIGVPSQRP 334

Query: 367  PNMT--RAGQGLHQKWKGPDKISLIYGDWIEDLE 272
             +M   R GQ  HQKWKGPDKIS IYGDWI+D+E
Sbjct: 335  SSMVIQRPGQRAHQKWKGPDKISRIYGDWIDDIE 368


Top