BLASTX nr result

ID: Angelica23_contig00017720 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica23_contig00017720
         (1983 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002272597.2| PREDICTED: double-stranded RNA-binding prote...   171   7e-40
ref|XP_002302963.1| predicted protein [Populus trichocarpa] gi|2...   154   8e-35
ref|XP_002532469.1| double-stranded RNA binding protein, putativ...   138   6e-30
ref|XP_004161611.1| PREDICTED: uncharacterized LOC101213863 [Cuc...   118   5e-24
ref|XP_004149792.1| PREDICTED: uncharacterized protein LOC101213...   118   5e-24

>ref|XP_002272597.2| PREDICTED: double-stranded RNA-binding protein 4-like [Vitis
           vinifera] gi|296087161|emb|CBI33535.3| unnamed protein
           product [Vitis vinifera]
          Length = 333

 Score =  171 bits (433), Expect = 7e-40
 Identities = 88/157 (56%), Positives = 110/157 (70%), Gaps = 1/157 (0%)
 Frame = +2

Query: 80  MEAPAQSKSVIPQVALLFKNRLQEYAQKAAIPLPIYHTTNEGTPHAPMFRSTVEINGAAY 259
           ++ PA S + +P+  L+ KNRLQEY Q++AIPLPIY T NEG  HAP FRSTV ++GA Y
Sbjct: 7   VDCPAPSSTRLPE-HLMHKNRLQEYTQRSAIPLPIYQTVNEGFQHAPKFRSTVLVDGATY 65

Query: 260 TSPNVFLHRKSAEMDAARIALLSLPLQIDAENCSLELEDIFICKSILNEYAVKINAEKPI 439
           TSPN F HRK+AE D AR+AL  +  +I  E C L  ED   CKSILNE+AVK+N EKP 
Sbjct: 66  TSPNTFSHRKAAEQDVARLALEFISKKIKDEGCPLIREDTVFCKSILNEFAVKMNLEKPT 125

Query: 440 YETKTSDGLPPAF-SSVTLNGKQYVGNEGRNKKESQR 547
           Y T   +GL P F SS+  NG  Y G+ GRNKKE+++
Sbjct: 126 YTTVQPEGLLPVFVSSLVFNGVTYTGDAGRNKKEAEQ 162


>ref|XP_002302963.1| predicted protein [Populus trichocarpa] gi|222844689|gb|EEE82236.1|
           predicted protein [Populus trichocarpa]
          Length = 452

 Score =  154 bits (389), Expect = 8e-35
 Identities = 76/142 (53%), Positives = 98/142 (69%), Gaps = 1/142 (0%)
 Frame = +2

Query: 125 LLFKNRLQEYAQKAAIPLPIYHTTNEGTPHAPMFRSTVEINGAAYTSPNVFLHRKSAEMD 304
           L++KNRLQEY QK+++ LP+Y T NEG  H P FRSTV ++GA Y S   FLHRK+AE D
Sbjct: 138 LMYKNRLQEYTQKSSLQLPVYQTLNEGPAHMPRFRSTVWVDGARYRSQKTFLHRKAAEQD 197

Query: 305 AARIALLSLPLQIDAENCSLELEDIFICKSILNEYAVKINAEKPIYETKTSDGLPPAF-S 481
            A +AL S+  ++  E C L L D   CKSILNE+AVK+N EKP Y T  S GL P F S
Sbjct: 198 VANLALESILKRVKDEGCPLLLGDTVFCKSILNEFAVKVNREKPTYNTVQSPGLLPVFIS 257

Query: 482 SVTLNGKQYVGNEGRNKKESQR 547
           ++  +G  Y G+ GRNKKE+++
Sbjct: 258 TLVFDGVSYTGDAGRNKKEAEQ 279


>ref|XP_002532469.1| double-stranded RNA binding protein, putative [Ricinus communis]
           gi|223527827|gb|EEF29925.1| double-stranded RNA binding
           protein, putative [Ricinus communis]
          Length = 289

 Score =  138 bits (347), Expect = 6e-30
 Identities = 74/144 (51%), Positives = 93/144 (64%), Gaps = 3/144 (2%)
 Frame = +2

Query: 125 LLFKNRLQEYAQKAAIPLPIYHTTNEGTPHAPMFRSTVEINGAAYTSPNVFLHRKSAEMD 304
           L++KNRLQEY Q+ ++ LPIY T NEG PH P FRSTV ++G  YTS N F HRK AE D
Sbjct: 12  LMYKNRLQEYTQRQSLQLPIYQTVNEGYPHDPKFRSTVLVDGEEYTSHNTFSHRKEAEQD 71

Query: 305 AARIALLSLPLQI--DAENCSLELEDIFICKSILNEYAVKINAEKPIYETKTSDGLPPAF 478
            A++AL S+  +I  + ++     ED   CKSILNEYAVK+  E P Y T    GL P F
Sbjct: 72  VAKLALTSITEKIKDEIKDEKFTHEDTVACKSILNEYAVKMQLEMPTYNTVKQGGLFPIF 131

Query: 479 -SSVTLNGKQYVGNEGRNKKESQR 547
            SS   NG  Y G+ GR KKE+++
Sbjct: 132 VSSSVFNGVTYNGDIGRTKKEAEQ 155


>ref|XP_004161611.1| PREDICTED: uncharacterized LOC101213863 [Cucumis sativus]
          Length = 385

 Score =  118 bits (296), Expect = 5e-24
 Identities = 60/141 (42%), Positives = 89/141 (63%), Gaps = 1/141 (0%)
 Frame = +2

Query: 128 LFKNRLQEYAQKAAIPLPIYHTTNEGTPHAPMFRSTVEINGAAYTSPNVFLHRKSAEMDA 307
           ++KN L EY QKA I +P+Y T +EG+P  P +RSTV ++   Y SPN F +R++AE DA
Sbjct: 77  VYKNHLHEYTQKAKIAVPVYQTIDEGSPSLPKYRSTVMVDEVHYVSPNTFRNRRAAEQDA 136

Query: 308 ARIALLSLPLQIDAENCSLELEDIFICKSILNEYAVKINAEKPIYETKTSDGLPPAF-SS 484
           AR+A   +  +   +   L  ED+ +CKSIL+EY  K+  E+PIY TK + G    F S+
Sbjct: 137 ARVAFEYISKKTKDDAFLLLREDLMLCKSILSEYTDKMGLERPIYTTKHNQGSVAFFQST 196

Query: 485 VTLNGKQYVGNEGRNKKESQR 547
           +  +G  Y  + GR KKE+++
Sbjct: 197 LVFDGVVYTSDLGRTKKEAEQ 217


>ref|XP_004149792.1| PREDICTED: uncharacterized protein LOC101213863 [Cucumis sativus]
          Length = 385

 Score =  118 bits (296), Expect = 5e-24
 Identities = 60/141 (42%), Positives = 89/141 (63%), Gaps = 1/141 (0%)
 Frame = +2

Query: 128 LFKNRLQEYAQKAAIPLPIYHTTNEGTPHAPMFRSTVEINGAAYTSPNVFLHRKSAEMDA 307
           ++KN L EY QKA I +P+Y T +EG+P  P +RSTV ++   Y SPN F +R++AE DA
Sbjct: 77  VYKNHLHEYTQKAKIAVPVYQTIDEGSPSLPKYRSTVMVDEVHYVSPNTFRNRRAAEQDA 136

Query: 308 ARIALLSLPLQIDAENCSLELEDIFICKSILNEYAVKINAEKPIYETKTSDGLPPAF-SS 484
           AR+A   +  +   +   L  ED+ +CKSIL+EY  K+  E+PIY TK + G    F S+
Sbjct: 137 ARVAFEYISKKTKDDAFLLLREDLMLCKSILSEYTDKMGLERPIYTTKHNQGSVAFFQST 196

Query: 485 VTLNGKQYVGNEGRNKKESQR 547
           +  +G  Y  + GR KKE+++
Sbjct: 197 LVFDGVVYTSDLGRTKKEAEQ 217


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