BLASTX nr result

ID: Angelica23_contig00017699 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica23_contig00017699
         (273 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|P41381.1|IF4A8_TOBAC RecName: Full=Eukaryotic initiation fact...   143   2e-32
ref|XP_002337398.1| predicted protein [Populus trichocarpa] gi|2...   141   5e-32
ref|XP_002329031.1| predicted protein [Populus trichocarpa] gi|1...   141   5e-32
ref|NP_175829.1| translation initiation factor 4A-2 [Arabidopsis...   141   6e-32
ref|NP_001185220.1| translation initiation factor 4A-2 [Arabidop...   141   6e-32

>sp|P41381.1|IF4A8_TOBAC RecName: Full=Eukaryotic initiation factor 4A-8; Short=eIF-4A-8;
           AltName: Full=ATP-dependent RNA helicase eIF4A-8
           gi|475219|emb|CAA55639.1| translation initiation factor
           (eIF-4A) [Nicotiana tabacum] gi|475221|emb|CAA55640.1|
           translation initiation factor (eIF-4A) [Nicotiana
           tabacum]
          Length = 413

 Score =  143 bits (360), Expect = 2e-32
 Identities = 69/73 (94%), Positives = 72/73 (98%)
 Frame = +3

Query: 3   RGIDV*QVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTTDDQRMLFDIQKFYNV 182
           RGIDV QVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTTDD+RMLFDIQKFYNV
Sbjct: 341 RGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTTDDERMLFDIQKFYNV 400

Query: 183 VVEELPSNVADLL 221
           ++EELPSNVADLL
Sbjct: 401 IIEELPSNVADLL 413


>ref|XP_002337398.1| predicted protein [Populus trichocarpa] gi|222838972|gb|EEE77323.1|
           predicted protein [Populus trichocarpa]
          Length = 390

 Score =  141 bits (356), Expect = 5e-32
 Identities = 70/73 (95%), Positives = 71/73 (97%)
 Frame = +3

Query: 3   RGIDV*QVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTTDDQRMLFDIQKFYNV 182
           RGIDV QVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVT+DD RMLFDIQKFYNV
Sbjct: 318 RGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTSDDDRMLFDIQKFYNV 377

Query: 183 VVEELPSNVADLL 221
           VVEELPSNVADLL
Sbjct: 378 VVEELPSNVADLL 390


>ref|XP_002329031.1| predicted protein [Populus trichocarpa] gi|118482674|gb|ABK93256.1|
           unknown [Populus trichocarpa]
           gi|222839702|gb|EEE78025.1| predicted protein [Populus
           trichocarpa]
          Length = 413

 Score =  141 bits (356), Expect = 5e-32
 Identities = 70/73 (95%), Positives = 71/73 (97%)
 Frame = +3

Query: 3   RGIDV*QVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTTDDQRMLFDIQKFYNV 182
           RGIDV QVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVT+DD RMLFDIQKFYNV
Sbjct: 341 RGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTSDDDRMLFDIQKFYNV 400

Query: 183 VVEELPSNVADLL 221
           VVEELPSNVADLL
Sbjct: 401 VVEELPSNVADLL 413


>ref|NP_175829.1| translation initiation factor 4A-2 [Arabidopsis thaliana]
           gi|1170505|sp|P41377.1|IF4A2_ARATH RecName:
           Full=Eukaryotic initiation factor 4A-2; Short=eIF-4A-2;
           AltName: Full=ATP-dependent RNA helicase eIF4A-2;
           AltName: Full=DEAD-box ATP-dependent RNA helicase 19
           gi|4585969|gb|AAD25605.1|AC005287_7 Eukaryotic
           Initiation Factor 4A-2 [Arabidopsis thaliana]
           gi|14423372|gb|AAK62368.1|AF386923_1 Eukaryotic
           Initiation Factor 4A-2 [Arabidopsis thaliana]
           gi|16226681|gb|AAL16231.1|AF428462_1 At1g54270/F20D21_52
           [Arabidopsis thaliana] gi|16556|emb|CAA46189.1|
           eukaryotic translation initiation factor 4A-2
           [Arabidopsis thaliana] gi|21593545|gb|AAM65512.1|
           eukaryotic translation initiation factor 4A, putative
           [Arabidopsis thaliana] gi|30725682|gb|AAP37863.1|
           At1g54270 [Arabidopsis thaliana]
           gi|110740791|dbj|BAE98493.1| Eukaryotic Initiation
           Factor 4A-2 [Arabidopsis thaliana]
           gi|332194952|gb|AEE33073.1| translation initiation
           factor 4A-2 [Arabidopsis thaliana]
          Length = 412

 Score =  141 bits (355), Expect = 6e-32
 Identities = 70/73 (95%), Positives = 71/73 (97%)
 Frame = +3

Query: 3   RGIDV*QVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTTDDQRMLFDIQKFYNV 182
           RGIDV QVSLVIN+DLPTQPENYLHRIGRSGRFGRKGVAINFVT DDQRMLFDIQKFYNV
Sbjct: 340 RGIDVQQVSLVINFDLPTQPENYLHRIGRSGRFGRKGVAINFVTLDDQRMLFDIQKFYNV 399

Query: 183 VVEELPSNVADLL 221
           VVEELPSNVADLL
Sbjct: 400 VVEELPSNVADLL 412


>ref|NP_001185220.1| translation initiation factor 4A-2 [Arabidopsis thaliana]
           gi|332194953|gb|AEE33074.1| translation initiation
           factor 4A-2 [Arabidopsis thaliana]
          Length = 407

 Score =  141 bits (355), Expect = 6e-32
 Identities = 70/73 (95%), Positives = 71/73 (97%)
 Frame = +3

Query: 3   RGIDV*QVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTTDDQRMLFDIQKFYNV 182
           RGIDV QVSLVIN+DLPTQPENYLHRIGRSGRFGRKGVAINFVT DDQRMLFDIQKFYNV
Sbjct: 335 RGIDVQQVSLVINFDLPTQPENYLHRIGRSGRFGRKGVAINFVTLDDQRMLFDIQKFYNV 394

Query: 183 VVEELPSNVADLL 221
           VVEELPSNVADLL
Sbjct: 395 VVEELPSNVADLL 407


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