BLASTX nr result

ID: Angelica23_contig00017629 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica23_contig00017629
         (911 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002268521.1| PREDICTED: uncharacterized protein LOC100256...    86   9e-15
ref|NP_194884.1| high chlorophyll fluorescence 153 protein [Arab...    73   8e-11
ref|XP_002513115.1| conserved hypothetical protein [Ricinus comm...    73   1e-10
ref|XP_002862560.1| hypothetical protein ARALYDRAFT_497397 [Arab...    72   1e-10
ref|XP_002297772.1| predicted protein [Populus trichocarpa] gi|2...    65   3e-08

>ref|XP_002268521.1| PREDICTED: uncharacterized protein LOC100256905 [Vitis vinifera]
          Length = 133

 Score = 86.3 bits (212), Expect = 9e-15
 Identities = 50/92 (54%), Positives = 64/92 (69%), Gaps = 3/92 (3%)
 Frame = +1

Query: 127 TFLRPTSLTTSCFSFASSLSPVV-FSGGLKSR--RGSSVVTRGVPGPNTYIFAFVFPLSL 297
           TFL  +  T +  S    +SP V FSG L  R  RG SVVTR  P  ++Y+FAFVFPLSL
Sbjct: 14  TFLPLSKATITRASLHLPISPAVRFSGELCRRKTRGLSVVTRAGPSTSSYVFAFVFPLSL 73

Query: 298 LVATIFTTLRISDKLDEDFLQELAVNQAILKA 393
           L  TIFT+LR+ DKL+ +FL+ELAVN+A+ +A
Sbjct: 74  LAVTIFTSLRVDDKLEREFLEELAVNEAMREA 105


>ref|NP_194884.1| high chlorophyll fluorescence 153 protein [Arabidopsis thaliana]
           gi|11692862|gb|AAG40034.1|AF324683_1 AT4g31560
           [Arabidopsis thaliana]
           gi|11908100|gb|AAG41479.1|AF326897_1 unknown protein
           [Arabidopsis thaliana]
           gi|12642912|gb|AAK00398.1|AF339716_1 unknown protein
           [Arabidopsis thaliana]
           gi|13926337|gb|AAK49632.1|AF372916_1 AT4g31560/F3L17_130
           [Arabidopsis thaliana] gi|5262767|emb|CAB45915.1|
           putative protein [Arabidopsis thaliana]
           gi|7270059|emb|CAB79874.1| putative protein [Arabidopsis
           thaliana] gi|21592375|gb|AAM64326.1| unknown
           [Arabidopsis thaliana] gi|27363346|gb|AAO11592.1|
           At4g31560/F3L17_130 [Arabidopsis thaliana]
           gi|332660529|gb|AEE85929.1| high chlorophyll
           fluorescence 153 protein [Arabidopsis thaliana]
          Length = 137

 Score = 73.2 bits (178), Expect = 8e-11
 Identities = 41/96 (42%), Positives = 61/96 (63%), Gaps = 9/96 (9%)
 Frame = +1

Query: 133 LRPTSLTTSCFSFASSLSPVVFS------GGL---KSRRGSSVVTRGVPGPNTYIFAFVF 285
           ++PT ++    S    LSP   +      GGL   +  R SSVVTR  P  ++Y+ AF  
Sbjct: 10  MQPTQISFPASSSQPLLSPPANNFTDGGAGGLCLTRRIRDSSVVTRAGPSTSSYLLAFAI 69

Query: 286 PLSLLVATIFTTLRISDKLDEDFLQELAVNQAILKA 393
           P +L+ AT+FT+++I+DKLDEDFL+++A+NQAI  A
Sbjct: 70  PATLIAATVFTSIKIADKLDEDFLEDIALNQAIKAA 105


>ref|XP_002513115.1| conserved hypothetical protein [Ricinus communis]
           gi|223548126|gb|EEF49618.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 93

 Score = 72.8 bits (177), Expect = 1e-10
 Identities = 38/81 (46%), Positives = 55/81 (67%), Gaps = 1/81 (1%)
 Frame = +1

Query: 133 LRPTSLTTSCFSFASSLSPVV-FSGGLKSRRGSSVVTRGVPGPNTYIFAFVFPLSLLVAT 309
           +RP     +  S      PV+ FS   K+RRGS+++ R  P  ++Y+FAFVFPLSLL+ T
Sbjct: 16  IRPKPTRATFKSLHGPTPPVIRFS---KTRRGSALIPRAGPSTSSYVFAFVFPLSLLIGT 72

Query: 310 IFTTLRISDKLDEDFLQELAV 372
           I T++RI+DKLD D+L+E+ V
Sbjct: 73  IITSIRIADKLDRDYLEEVRV 93


>ref|XP_002862560.1| hypothetical protein ARALYDRAFT_497397 [Arabidopsis lyrata subsp.
           lyrata] gi|297308158|gb|EFH38818.1| hypothetical protein
           ARALYDRAFT_497397 [Arabidopsis lyrata subsp. lyrata]
          Length = 137

 Score = 72.4 bits (176), Expect = 1e-10
 Identities = 40/96 (41%), Positives = 60/96 (62%), Gaps = 9/96 (9%)
 Frame = +1

Query: 133 LRPTSLTTSCFSFASSLSPVV------FSGGL---KSRRGSSVVTRGVPGPNTYIFAFVF 285
           ++PT ++ S  S     SP         +GGL   +  R  SVVTR  P  ++Y+ AF  
Sbjct: 10  MQPTQISFSASSSQPLFSPPANNFPDGVAGGLCLTRRIRDCSVVTRAGPSTSSYLLAFAI 69

Query: 286 PLSLLVATIFTTLRISDKLDEDFLQELAVNQAILKA 393
           P +L+ AT+FT+++I+DKLDEDFL+++A+NQAI  A
Sbjct: 70  PATLIAATVFTSIKIADKLDEDFLEDIALNQAIKAA 105


>ref|XP_002297772.1| predicted protein [Populus trichocarpa] gi|222845030|gb|EEE82577.1|
           predicted protein [Populus trichocarpa]
          Length = 162

 Score = 64.7 bits (156), Expect = 3e-08
 Identities = 29/51 (56%), Positives = 41/51 (80%)
 Frame = +1

Query: 211 KSRRGSSVVTRGVPGPNTYIFAFVFPLSLLVATIFTTLRISDKLDEDFLQE 363
           + +RG +VVTR     N+Y+ AF+ PLSLL ATIFT++RI+DKLD+D+L+E
Sbjct: 40  RKKRGLTVVTRAGLSANSYVLAFLLPLSLLAATIFTSIRIADKLDQDYLEE 90


Top