BLASTX nr result

ID: Angelica23_contig00017619 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica23_contig00017619
         (358 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002285377.1| PREDICTED: uncharacterized protein LOC100248...   177   1e-42
ref|XP_002522563.1| Heterogeneous nuclear ribonucleoprotein A1, ...   173   1e-41
ref|XP_002894431.1| hypothetical protein ARALYDRAFT_892356 [Arab...   172   2e-41
ref|XP_002882908.1| hypothetical protein ARALYDRAFT_478927 [Arab...   172   3e-41
ref|NP_188119.1| RNA recognition motif-containing protein [Arabi...   172   3e-41

>ref|XP_002285377.1| PREDICTED: uncharacterized protein LOC100248626 [Vitis vinifera]
           gi|147789426|emb|CAN66609.1| hypothetical protein
           VITISV_017556 [Vitis vinifera]
          Length = 449

 Score =  177 bits (448), Expect = 1e-42
 Identities = 88/119 (73%), Positives = 98/119 (82%)
 Frame = +1

Query: 1   YGELDEAVVILDKATGKSKGFGFLTYKHIDGAIRALKEPSKKIDGRMTVTNLASAXXXXX 180
           YGEL+EAVVILDK T KSKG+GF+T+KH+DGA+ ALKEPSKKIDGRMTVT LA++     
Sbjct: 94  YGELEEAVVILDKVTAKSKGYGFVTFKHVDGALLALKEPSKKIDGRMTVTQLAASGLSGP 153

Query: 181 XVMQQPVDVSNRKIYVANVPYDMPADRLLGFFLSYGEVEEGPLGFDKLTGKSKGFALFV 357
                 VDVS RKIYVANVP DMPADRLL  F SYGE+EEGPLGFDK TGKS+GFALFV
Sbjct: 154 ASNASAVDVSMRKIYVANVPVDMPADRLLAHFSSYGEIEEGPLGFDKQTGKSRGFALFV 212


>ref|XP_002522563.1| Heterogeneous nuclear ribonucleoprotein A1, putative [Ricinus
           communis] gi|223538254|gb|EEF39863.1| Heterogeneous
           nuclear ribonucleoprotein A1, putative [Ricinus
           communis]
          Length = 398

 Score =  173 bits (439), Expect = 1e-41
 Identities = 86/121 (71%), Positives = 99/121 (81%), Gaps = 2/121 (1%)
 Frame = +1

Query: 1   YGELDEAVVILDKATGKSKGFGFLTYKHIDGAIRALKEPSKKIDGRMTVTNLASAXXXXX 180
           YGEL+EA+VI DK TGKSKGFGF+T+KH+DGA+ ALKEPSKKIDGRMTVT LASA     
Sbjct: 98  YGELEEAIVIFDKNTGKSKGFGFITFKHVDGALIALKEPSKKIDGRMTVTQLASAGLSNS 157

Query: 181 XVMQQ--PVDVSNRKIYVANVPYDMPADRLLGFFLSYGEVEEGPLGFDKLTGKSKGFALF 354
            +       DVS RKIYV NVPY++P++RLLGFFL+YGEVEEGPLGFDK TGKSKGFA  
Sbjct: 158 SINSSGGGSDVSARKIYVGNVPYNIPSERLLGFFLNYGEVEEGPLGFDKSTGKSKGFAFI 217

Query: 355 V 357
           +
Sbjct: 218 I 218



 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 27/55 (49%), Positives = 36/55 (65%)
 Frame = +1

Query: 1   YGELDEAVVILDKATGKSKGFGFLTYKHIDGAIRALKEPSKKIDGRMTVTNLASA 165
           YGE++E  +  DK+TGKSKGF F+ YK  +GA  A+ +P K IDG   V  +A A
Sbjct: 194 YGEVEEGPLGFDKSTGKSKGFAFIIYKTEEGAKAAIADPVKMIDGHQVVCKMAVA 248


>ref|XP_002894431.1| hypothetical protein ARALYDRAFT_892356 [Arabidopsis lyrata subsp.
           lyrata] gi|297340273|gb|EFH70690.1| hypothetical protein
           ARALYDRAFT_892356 [Arabidopsis lyrata subsp. lyrata]
          Length = 420

 Score =  172 bits (437), Expect = 2e-41
 Identities = 84/119 (70%), Positives = 100/119 (84%)
 Frame = +1

Query: 1   YGELDEAVVILDKATGKSKGFGFLTYKHIDGAIRALKEPSKKIDGRMTVTNLASAXXXXX 180
           YG+LDEA+VILDK T KSKG+GF+T+KH+DGA+ ALKEPSKKIDGR+TVT LA+A     
Sbjct: 98  YGDLDEAIVILDKVTAKSKGYGFVTFKHVDGALLALKEPSKKIDGRVTVTQLAAAGNQGT 157

Query: 181 XVMQQPVDVSNRKIYVANVPYDMPADRLLGFFLSYGEVEEGPLGFDKLTGKSKGFALFV 357
                  D+S RKIYVANVP+DMPADRLL  FL+YG++EEGPLGFDK+TGKS+GFALFV
Sbjct: 158 -TNSHVSDISMRKIYVANVPFDMPADRLLNQFLAYGDIEEGPLGFDKITGKSRGFALFV 215


>ref|XP_002882908.1| hypothetical protein ARALYDRAFT_478927 [Arabidopsis lyrata subsp.
           lyrata] gi|297328748|gb|EFH59167.1| hypothetical protein
           ARALYDRAFT_478927 [Arabidopsis lyrata subsp. lyrata]
          Length = 404

 Score =  172 bits (436), Expect = 3e-41
 Identities = 83/119 (69%), Positives = 101/119 (84%)
 Frame = +1

Query: 1   YGELDEAVVILDKATGKSKGFGFLTYKHIDGAIRALKEPSKKIDGRMTVTNLASAXXXXX 180
           YG+L+EA+VILDK TGKSKG+GF+T+ H+DGA+ ALKEPSKKIDGR+TVT LA++     
Sbjct: 98  YGDLEEAIVILDKVTGKSKGYGFVTFMHVDGALLALKEPSKKIDGRVTVTQLAASGNQGT 157

Query: 181 XVMQQPVDVSNRKIYVANVPYDMPADRLLGFFLSYGEVEEGPLGFDKLTGKSKGFALFV 357
               Q  D+S RKIYVANVP+DMPADRLL  F++YG+VEEGPLGFDK+TGKS+GFALFV
Sbjct: 158 G--SQIADISMRKIYVANVPFDMPADRLLNHFMAYGDVEEGPLGFDKVTGKSRGFALFV 214


>ref|NP_188119.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
           gi|42572443|ref|NP_974317.1| RNA recognition
           motif-containing protein [Arabidopsis thaliana]
           gi|8777484|dbj|BAA97064.1| unnamed protein product
           [Arabidopsis thaliana] gi|17380744|gb|AAL36202.1|
           putative RNA-binding protein [Arabidopsis thaliana]
           gi|20259621|gb|AAM14167.1| putative RNA-binding protein
           [Arabidopsis thaliana] gi|222422941|dbj|BAH19456.1|
           AT3G15010 [Arabidopsis thaliana]
           gi|332642081|gb|AEE75602.1| RNA recognition
           motif-containing protein [Arabidopsis thaliana]
           gi|332642082|gb|AEE75603.1| RNA recognition
           motif-containing protein [Arabidopsis thaliana]
          Length = 404

 Score =  172 bits (436), Expect = 3e-41
 Identities = 83/119 (69%), Positives = 101/119 (84%)
 Frame = +1

Query: 1   YGELDEAVVILDKATGKSKGFGFLTYKHIDGAIRALKEPSKKIDGRMTVTNLASAXXXXX 180
           YG+L+EA+VILDK TGKSKG+GF+T+ H+DGA+ ALKEPSKKIDGR+TVT LA++     
Sbjct: 98  YGDLEEAIVILDKVTGKSKGYGFVTFMHVDGALLALKEPSKKIDGRVTVTQLAASGNQGT 157

Query: 181 XVMQQPVDVSNRKIYVANVPYDMPADRLLGFFLSYGEVEEGPLGFDKLTGKSKGFALFV 357
               Q  D+S RKIYVANVP+DMPADRLL  F++YG+VEEGPLGFDK+TGKS+GFALFV
Sbjct: 158 G--SQIADISMRKIYVANVPFDMPADRLLNHFMAYGDVEEGPLGFDKVTGKSRGFALFV 214


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