BLASTX nr result

ID: Angelica23_contig00017585 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica23_contig00017585
         (1532 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002308787.1| f-box family protein [Populus trichocarpa] g...   221   3e-55
ref|XP_002532719.1| ubiquitin-protein ligase, putative [Ricinus ...   192   2e-46
ref|XP_002308788.1| predicted protein [Populus trichocarpa] gi|2...   176   1e-41
ref|NP_192993.2| F-box protein CPR30 [Arabidopsis thaliana] gi|1...   174   4e-41
dbj|BAF01202.1| hypothetical protein [Arabidopsis thaliana]           174   4e-41

>ref|XP_002308787.1| f-box family protein [Populus trichocarpa]
            gi|222854763|gb|EEE92310.1| f-box family protein [Populus
            trichocarpa]
          Length = 396

 Score =  221 bits (564), Expect = 3e-55
 Identities = 132/361 (36%), Positives = 196/361 (54%), Gaps = 6/361 (1%)
 Frame = +1

Query: 199  DLIDEILCFLPVKYLLRCRAVSKEWCSIIDTTAFVKKHLKNSIKCNPDGDGVLITGAQFC 378
            ++I EILC LP K LL CR+VSK WC++ID   FVK HLK+S+  + +   +L T +   
Sbjct: 7    EMIAEILCRLPAKELLCCRSVSKPWCALIDGPNFVKLHLKHSMDTSSNLYIILRTTSHVH 66

Query: 379  VTDLDSLYDANDATAIC-LNDTLKDVLSGAHFVGTANCLVCFCKNKMNEFLLLNPSTRKY 555
              D +     ND   +  LN  L     G   +G+ N L+C   N +++  + NPSTRK+
Sbjct: 67   YMDFEQNLVLNDCVTLKELNHPLMCYNHGIKVLGSVNGLLCI-SNVVDDIAVWNPSTRKH 125

Query: 556  KKIPRLPHKIGCFLDLMEASPC--GFGYDHVNDDYKIFKVAQFQQQNPFKYLGIMVVVYS 729
            + +P LP ++  +      S    GFGYD V DDYK+ ++AQF       +    V VYS
Sbjct: 126  RVVPFLPIELKRYFGTKSCSVYVFGFGYDSVRDDYKLVRIAQFGGGGKRSFES-EVKVYS 184

Query: 730  LKSNKWTEIQNVPNNFSLITHLGMFKNGSLYWLANRYSVDFNHRTILCFDLGLEQFKEFR 909
            L+   W  I ++P         G+F NG+L+W+            ++  DLG+E ++E  
Sbjct: 185  LRKQSWRRIGDMPYCVHYPGANGVFANGALHWVVGENPESNVANIVVALDLGVEDYREVL 244

Query: 910  FPTANNGNFSVPTG---GSFCILDNCMNSRMDVWMVDNHGAENPWYKAFSVEQHGALGSF 1080
             P   + NF +  G   G  C L N +  R+DVWM+  +G +  W K FSV Q+  +G  
Sbjct: 245  QPEYKDKNFYIDLGVLRGCLCFLANFLGERVDVWMMKEYGVKESWTKLFSVAQYEVIGFL 304

Query: 1081 QYFRPVAFSKSGKDVLLEVDSTRLVWYDPERKVVKNVRINGIPSKFGSQLYRESLLQLTE 1260
            +  +P+A+SKSG +VL+E D+  L WYD +RK VKN RI GIP  F +  + ESL+ ++ 
Sbjct: 305  RSLKPLAYSKSGDEVLIEHDNLDLCWYDLKRKQVKN-RIPGIPYSFEADTFVESLISVSP 363

Query: 1261 N 1263
            N
Sbjct: 364  N 364


>ref|XP_002532719.1| ubiquitin-protein ligase, putative [Ricinus communis]
            gi|223527546|gb|EEF29668.1| ubiquitin-protein ligase,
            putative [Ricinus communis]
          Length = 389

 Score =  192 bits (489), Expect = 2e-46
 Identities = 121/366 (33%), Positives = 194/366 (53%), Gaps = 7/366 (1%)
 Frame = +1

Query: 187  SLLYDLIDEILCFLPVKYLLRCRAVSKEWCSIIDTTAFVKKHLKNSIKCNPDGDGVLITG 366
            +L  ++I EILC L  K LL CR VSK W ++ID+  F+  HL +SI+ +P    +++  
Sbjct: 3    NLPLEMIAEILCRLTAKKLLCCRCVSKRWRTLIDSPTFIYLHLNHSIE-SPCNLSIILKS 61

Query: 367  AQFCVTDLDSLYDAN--DATAICLNDTLKDVLSGAHFVGTANCLVCFCKNKMNEFLLLNP 540
            ++      D L +    D   +C N        G   +G+ N L+C C N +++  L NP
Sbjct: 62   SELYSLSFDLLDNIQPLDHPLMCYNH-------GVKILGSCNGLLCIC-NIVDDIALWNP 113

Query: 541  STRKYKKIPRLPHKIGCFLDLMEA--SPCGFGYDHVNDDYKIFKVAQFQQQNPFKYLGIM 714
            S R ++ +P LP ++  +  +     S  GFGYD  NDDYK+ ++AQF   +  K     
Sbjct: 114  SIRAHRVVPYLPVELKRYFGMCSCRVSVFGFGYDLSNDDYKLVRIAQFGGVDR-KSFESE 172

Query: 715  VVVYSLKSNKWTEIQNVPNNFSLITHLGMFKNGSLYWLANRYSVDFNHRTILCFDLGLEQ 894
            V V+SL+ N W  I ++P         G++ NG+L+WL ++        TI+  DLG+E 
Sbjct: 173  VKVFSLRKNSWRRIADMPYCVLYPGENGIYANGALHWLVSQDPDSTVADTIVALDLGVED 232

Query: 895  FKEFRFPTANNGNFSVPTG---GSFCILDNCMNSRMDVWMVDNHGAENPWYKAFSVEQHG 1065
            +     P   + N ++  G   G   +L    + R+DVW+++ +  +  W K FSV +  
Sbjct: 233  YHVVPKPEFVDMNCNMGVGVLQGCLSLLAYARSERVDVWVMEEYMVKESWSKLFSVARLE 292

Query: 1066 ALGSFQYFRPVAFSKSGKDVLLEVDSTRLVWYDPERKVVKNVRINGIPSKFGSQLYRESL 1245
             +G  +  +P+A+SKSG +VL+E D+  L WYD +RK V NV I G+P  F +++   SL
Sbjct: 293  VIGILRSLKPLAYSKSGNEVLIEHDNVNLFWYDLKRKEVVNVWIQGVPITFEAEICVGSL 352

Query: 1246 LQLTEN 1263
            + L  N
Sbjct: 353  VPLNAN 358


>ref|XP_002308788.1| predicted protein [Populus trichocarpa] gi|222854764|gb|EEE92311.1|
            predicted protein [Populus trichocarpa]
          Length = 400

 Score =  176 bits (447), Expect = 1e-41
 Identities = 127/382 (33%), Positives = 195/382 (51%), Gaps = 27/382 (7%)
 Frame = +1

Query: 196  YDLIDEILCFLPVKYLLRCRAVSKEWCSIIDTTAFVKKHLKNSIKCNPDGDGVLITGAQF 375
            +++I +IL  LPVK L+R R++SK  CS+ID   F+  HL +SI    +   +L     F
Sbjct: 6    HEVIHDILLQLPVKSLVRFRSLSKPICSLIDGPNFINLHLNHSITTKSNHSIILKEWDLF 65

Query: 376  CVTDLDSLYDANDATAICLNDTLKDVLSGAHFVGTANCLVCFCKNKMNEFLLLNPSTRKY 555
             V D D+L DA +     L         G   +G+ N LV F +       + N STR+ 
Sbjct: 66   AV-DFDALSDAVEVKHHPLYSG-----GGTEVIGSVNGLV-FLRRSETNIAVYNLSTREC 118

Query: 556  KK-------IPRLPHKIGCFLDLMEASPCGFGYDHVNDDYKIFKVAQFQQQNPFKYLGIM 714
            KK       IPR     G           GFGYD   DDYK+ ++AQF +++     G +
Sbjct: 119  KKCYVAETEIPRRDMTTGYVY-------YGFGYDSYGDDYKVVRMAQFVREDGGGDGGGL 171

Query: 715  -----VVVYSLKSNKWTEIQNVPNNFSLIT----HL------GMFKNGSLYWLANRYSVD 849
                 V VYSLK++KW +I+ +P    L++    H+      G+F   +L+W+  +    
Sbjct: 172  GCEYEVKVYSLKNDKWKKIEGLPIRLRLLSKPFFHILNRRGYGVFAGHALHWIVPQRREL 231

Query: 850  FNHRTILCFDLGLEQFKEFRFPTANNG--NFSVPTG---GSFCILDNCMNSRMDVWMVDN 1014
                 +L FD+  ++F E   P   N   NF V  G   G+ C++ N  +  +DVW++  
Sbjct: 232  GIRDCVLGFDIRDDKFFELPQPDYENKGMNFHVDVGVLEGNLCVMCNYEHVCVDVWVMKE 291

Query: 1015 HGAENPWYKAFSVEQHGALGSFQYFRPVAFSKSGKDVLLEVDSTRLVWYDPERKVVKNVR 1194
            +G +  W K FSV     + +F + RP+ +SK G  VLLEV+  +L+WYD + K  K VR
Sbjct: 292  YGVKESWCKMFSVHAIKWISAFMFLRPLVYSKGGDMVLLEVNGEKLLWYDWKNKHAKVVR 351

Query: 1195 INGIPSKFGSQLYRESLLQLTE 1260
            + G PS FGS++Y ESL+++ +
Sbjct: 352  VRGGPSSFGSEMYVESLIRIND 373


>ref|NP_192993.2| F-box protein CPR30 [Arabidopsis thaliana]
            gi|145333023|ref|NP_001078377.1| F-box protein CPR30
            [Arabidopsis thaliana]
            gi|142989747|sp|Q9SU30.2|CPR30_ARATH RecName: Full=F-box
            protein CPR30; AltName: Full=Protein CONSTITUTIVE
            EXPRESSER OF PR GENES 30 gi|332657747|gb|AEE83147.1|
            F-box protein CPR30 [Arabidopsis thaliana]
            gi|332657748|gb|AEE83148.1| F-box protein CPR30
            [Arabidopsis thaliana]
          Length = 413

 Score =  174 bits (442), Expect = 4e-41
 Identities = 122/377 (32%), Positives = 193/377 (51%), Gaps = 27/377 (7%)
 Frame = +1

Query: 199  DLIDEILCFLPVKYLLRCRAVSKEWCSIIDTTAFVKKHLKNSIKCNPDGDGVLITGA-QF 375
            D++++I   LP K L+RCRA+SK    +I+   F++ HL   ++   D   +L+ GA + 
Sbjct: 7    DIVNDIFLRLPAKTLVRCRALSKPCYHLINDPDFIESHLHRVLQTG-DHLMILLRGALRL 65

Query: 376  CVTDLDSLYDANDATAICLNDTLKDVLSGAHFVGTANCLVCFCKNKMNEFLLLNPSTRKY 555
               DLDSL   +D           +V       G++N L+    N   +  + NPSTR+ 
Sbjct: 66   YSVDLDSLDSVSDVEHPMKRGGPTEVF------GSSNGLIGL-SNSPTDLAVFNPSTRQI 118

Query: 556  KKIPRLPHKIGCFLDLMEASPC------GFGYDHVNDDYKIFKVAQFQQQNPFKYLGIM- 714
             ++P  P  I    DL + S        G GYD V+DDYK+ ++ QF+  +  + LG   
Sbjct: 119  HRLP--PSSI----DLPDGSSTRGYVFYGLGYDSVSDDYKVVRMVQFKIDSEDE-LGCSF 171

Query: 715  ---VVVYSLKSNKWTEIQNVPNNFSLITHL----------GMFKNGSLYWLANRYSVDFN 855
               V V+SLK N W  I++V ++  L+ +           G+    SL+W+  R      
Sbjct: 172  PYEVKVFSLKKNSWKRIESVASSIQLLFYFYYHLLYRRGYGVLAGNSLHWVLPRRPGLIA 231

Query: 856  HRTILCFDLGLEQFKEFRFPTA-NNGNFSVPTG-----GSFCILDNCMNSRMDVWMVDNH 1017
               I+ FDL LE+F+  RFP A  NGN  +        G  C++ N   S +DVWM+  +
Sbjct: 232  FNLIVRFDLALEEFEIVRFPEAVANGNVDIQMDIGVLDGCLCLMCNYDQSYVDVWMMKEY 291

Query: 1018 GAENPWYKAFSVEQHGALGSFQYFRPVAFSKSGKDVLLEVDSTRLVWYDPERKVVKNVRI 1197
               + W K F+V++  ++ SF Y RP+ +SK  K VLLE+++T+LVW+D E K +  +RI
Sbjct: 292  NVRDSWTKVFTVQKPKSVKSFSYMRPLVYSKDKKKVLLELNNTKLVWFDLESKKMSTLRI 351

Query: 1198 NGIPSKFGSQLYRESLL 1248
               PS + ++L   SL+
Sbjct: 352  KDCPSSYSAELVVSSLV 368


>dbj|BAF01202.1| hypothetical protein [Arabidopsis thaliana]
          Length = 413

 Score =  174 bits (442), Expect = 4e-41
 Identities = 122/377 (32%), Positives = 193/377 (51%), Gaps = 27/377 (7%)
 Frame = +1

Query: 199  DLIDEILCFLPVKYLLRCRAVSKEWCSIIDTTAFVKKHLKNSIKCNPDGDGVLITGA-QF 375
            D++++I   LP K L+RCRA+SK    +I+   F++ HL   ++   D   +L+ GA + 
Sbjct: 7    DIVNDIFLRLPAKTLVRCRALSKPCYHLINDPDFIESHLHRVLQTG-DHLMILLRGALRL 65

Query: 376  CVTDLDSLYDANDATAICLNDTLKDVLSGAHFVGTANCLVCFCKNKMNEFLLLNPSTRKY 555
               DLDSL   +D           +V       G++N L+    N   +  + NPSTR+ 
Sbjct: 66   YSVDLDSLDSVSDVEHPMKRGGPTEVF------GSSNGLIGL-SNSPTDLAVFNPSTRQI 118

Query: 556  KKIPRLPHKIGCFLDLMEASPC------GFGYDHVNDDYKIFKVAQFQQQNPFKYLGIM- 714
             ++P  P  I    DL + S        G GYD V+DDYK+ ++ QF+  +  + LG   
Sbjct: 119  HRLP--PSSI----DLPDGSSTRGYVFYGLGYDSVSDDYKVVRMVQFKIDSEDE-LGCSF 171

Query: 715  ---VVVYSLKSNKWTEIQNVPNNFSLITHL----------GMFKNGSLYWLANRYSVDFN 855
               V V+SLK N W  I++V ++  L+ +           G+    SL+W+  R      
Sbjct: 172  PYEVKVFSLKKNSWKRIESVASSIQLLFYFYYHLLYRRGYGVLAGNSLHWVLPRRPGLIA 231

Query: 856  HRTILCFDLGLEQFKEFRFPTA-NNGNFSVPTG-----GSFCILDNCMNSRMDVWMVDNH 1017
               I+ FDL LE+F+  RFP A  NGN  +        G  C++ N   S +DVWM+  +
Sbjct: 232  FNLIVRFDLALEEFEIVRFPEAVANGNVDIQMDIGVLDGCLCLMCNYDQSYVDVWMMKEY 291

Query: 1018 GAENPWYKAFSVEQHGALGSFQYFRPVAFSKSGKDVLLEVDSTRLVWYDPERKVVKNVRI 1197
               + W K F+V++  ++ SF Y RP+ +SK  K VLLE+++T+LVW+D E K +  +RI
Sbjct: 292  NVRDSWTKVFTVQKPKSVKSFSYMRPLVYSKDKKKVLLELNNTKLVWFDLESKKMSTLRI 351

Query: 1198 NGIPSKFGSQLYRESLL 1248
               PS + ++L   SL+
Sbjct: 352  KDCPSSYSAELVVSSLV 368


Top