BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica23_contig00017581
         (423 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001235803.1| uncharacterized protein LOC100305979 [Glycin...    85   2e-22
ref|XP_003546327.1| PREDICTED: DNA-directed RNA polymerase II su...    84   4e-22
ref|XP_004134242.1| PREDICTED: DNA-directed RNA polymerase II su...    82   8e-22
ref|XP_002276956.1| PREDICTED: DNA-directed RNA polymerase II su...    84   2e-21
ref|XP_003594777.1| DNA-directed RNA polymerase II subunit RPB9 ...    81   2e-21

>ref|NP_001235803.1| uncharacterized protein LOC100305979 [Glycine max]
           gi|255627167|gb|ACU13928.1| unknown [Glycine max]
          Length = 114

 Score = 84.7 bits (208), Expect(2) = 2e-22
 Identities = 40/41 (97%), Positives = 40/41 (97%)
 Frame = -3

Query: 421 VLQDVAADPTLPRTKSVRCSVCNHGEAVFFQATARGEEGMT 299
           VLQDVAADPTLPRTKSVRCS CNHGEAVFFQATARGEEGMT
Sbjct: 58  VLQDVAADPTLPRTKSVRCSQCNHGEAVFFQATARGEEGMT 98



 Score = 46.2 bits (108), Expect(2) = 2e-22
 Identities = 17/18 (94%), Positives = 17/18 (94%)
 Frame = -1

Query: 219 MTLFFVCCNPVCGHRWRD 166
           MTLFFVCCNP CGHRWRD
Sbjct: 97  MTLFFVCCNPNCGHRWRD 114


>ref|XP_003546327.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB9-like
           [Glycine max]
          Length = 114

 Score = 83.6 bits (205), Expect(2) = 4e-22
 Identities = 39/41 (95%), Positives = 40/41 (97%)
 Frame = -3

Query: 421 VLQDVAADPTLPRTKSVRCSVCNHGEAVFFQATARGEEGMT 299
           VLQDVAADPTLPRTKSVRC+ CNHGEAVFFQATARGEEGMT
Sbjct: 58  VLQDVAADPTLPRTKSVRCTQCNHGEAVFFQATARGEEGMT 98



 Score = 46.2 bits (108), Expect(2) = 4e-22
 Identities = 17/18 (94%), Positives = 17/18 (94%)
 Frame = -1

Query: 219 MTLFFVCCNPVCGHRWRD 166
           MTLFFVCCNP CGHRWRD
Sbjct: 97  MTLFFVCCNPNCGHRWRD 114


>ref|XP_004134242.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB9-like
           [Cucumis sativus] gi|449517969|ref|XP_004166016.1|
           PREDICTED: DNA-directed RNA polymerase II subunit
           RPB9-like [Cucumis sativus]
          Length = 114

 Score = 82.4 bits (202), Expect(2) = 8e-22
 Identities = 38/41 (92%), Positives = 40/41 (97%)
 Frame = -3

Query: 421 VLQDVAADPTLPRTKSVRCSVCNHGEAVFFQATARGEEGMT 299
           VLQDVAADPTLPRTK+VRC+ CNHGEAVFFQATARGEEGMT
Sbjct: 58  VLQDVAADPTLPRTKAVRCAQCNHGEAVFFQATARGEEGMT 98



 Score = 46.2 bits (108), Expect(2) = 8e-22
 Identities = 17/18 (94%), Positives = 17/18 (94%)
 Frame = -1

Query: 219 MTLFFVCCNPVCGHRWRD 166
           MTLFFVCCNP CGHRWRD
Sbjct: 97  MTLFFVCCNPNCGHRWRD 114


>ref|XP_002276956.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB9 [Vitis
           vinifera] gi|147769002|emb|CAN66735.1| hypothetical
           protein VITISV_024186 [Vitis vinifera]
           gi|296083263|emb|CBI22899.3| unnamed protein product
           [Vitis vinifera]
          Length = 114

 Score = 83.6 bits (205), Expect(2) = 2e-21
 Identities = 39/41 (95%), Positives = 40/41 (97%)
 Frame = -3

Query: 421 VLQDVAADPTLPRTKSVRCSVCNHGEAVFFQATARGEEGMT 299
           VLQDVAADPTLPRTKSVRC+ CNHGEAVFFQATARGEEGMT
Sbjct: 58  VLQDVAADPTLPRTKSVRCAQCNHGEAVFFQATARGEEGMT 98



 Score = 43.9 bits (102), Expect(2) = 2e-21
 Identities = 16/18 (88%), Positives = 17/18 (94%)
 Frame = -1

Query: 219 MTLFFVCCNPVCGHRWRD 166
           MTLFFVCCNP CG+RWRD
Sbjct: 97  MTLFFVCCNPNCGYRWRD 114


>ref|XP_003594777.1| DNA-directed RNA polymerase II subunit RPB9 [Medicago truncatula]
           gi|87240462|gb|ABD32320.1| DNA-directed RNA polymerase,
           subunit C11/M/9 [Medicago truncatula]
           gi|217075262|gb|ACJ85991.1| unknown [Medicago
           truncatula] gi|355483825|gb|AES65028.1| DNA-directed RNA
           polymerase II subunit RPB9 [Medicago truncatula]
           gi|388497558|gb|AFK36845.1| unknown [Medicago
           truncatula]
          Length = 114

 Score = 81.3 bits (199), Expect(2) = 2e-21
 Identities = 38/41 (92%), Positives = 39/41 (95%)
 Frame = -3

Query: 421 VLQDVAADPTLPRTKSVRCSVCNHGEAVFFQATARGEEGMT 299
           VLQDVAADPTLPRTK+VRC  CNHGEAVFFQATARGEEGMT
Sbjct: 58  VLQDVAADPTLPRTKAVRCVQCNHGEAVFFQATARGEEGMT 98



 Score = 46.2 bits (108), Expect(2) = 2e-21
 Identities = 17/18 (94%), Positives = 17/18 (94%)
 Frame = -1

Query: 219 MTLFFVCCNPVCGHRWRD 166
           MTLFFVCCNP CGHRWRD
Sbjct: 97  MTLFFVCCNPNCGHRWRD 114