BLASTX nr result

ID: Angelica23_contig00017556 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica23_contig00017556
         (692 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002277771.2| PREDICTED: poly(A) RNA polymerase GLD2-like ...    76   6e-12
ref|XP_002524216.1| zinc finger protein, putative [Ricinus commu...    75   2e-11
ref|XP_004150639.1| PREDICTED: poly(A) RNA polymerase GLD2-like ...    64   3e-08
gb|AFK47337.1| unknown [Lotus japonicus]                               59   1e-06
gb|AFK47290.1| unknown [Lotus japonicus]                               59   1e-06

>ref|XP_002277771.2| PREDICTED: poly(A) RNA polymerase GLD2-like [Vitis vinifera]
           gi|296086183|emb|CBI31624.3| unnamed protein product
           [Vitis vinifera]
          Length = 453

 Score = 76.3 bits (186), Expect = 6e-12
 Identities = 52/153 (33%), Positives = 79/153 (51%), Gaps = 12/153 (7%)
 Frame = -1

Query: 692 EDPFEQPVNTARSVIDKHLIRIADAFRTTHVTLTSHDHNRSTLLAALIRRDRLPNVTRST 513
           EDPFEQP NTAR V  + L RI++AF+TTH  LTS + ++ +L+  L+ R ++    R  
Sbjct: 299 EDPFEQPENTARGVRSRQLQRISEAFQTTHQRLTSANQDQHSLIDTLV-RPQIAQFIRRA 357

Query: 512 PVRNSN----NPGNYHPQINGAISSPSQAHHPCSTMFNLHPNNANMHR--PVQSNQNTV- 354
           P RNS+    N    +P +    +SP Q  +           N    R  PVQ+  N+V 
Sbjct: 358 PSRNSSAYGRNNSRTYPSVPNVANSPLQFQNDFQNRRPQSRPNTTSQRSAPVQARPNSVT 417

Query: 353 ----VNVRPYHANMNRPV-QPNYNQAQQIWRAK 270
               +  RP  + + R V Q   +Q+Q++WR +
Sbjct: 418 MQRSMYTRPGSSTVQRSVQQATQSQSQRVWRPR 450


>ref|XP_002524216.1| zinc finger protein, putative [Ricinus communis]
           gi|223536493|gb|EEF38140.1| zinc finger protein,
           putative [Ricinus communis]
          Length = 493

 Score = 74.7 bits (182), Expect = 2e-11
 Identities = 60/194 (30%), Positives = 90/194 (46%), Gaps = 47/194 (24%)
 Frame = -1

Query: 692 EDPFEQPVNTARSVIDKHLIRIADAFRTTHVTLTSHDHNRSTLLAALIRRDRLPNVTRST 513
           EDPFEQP N AR+V   +L++IA+AF+TT+  L   + NR++LL  L+R + L N    T
Sbjct: 299 EDPFEQPENAARAVSAGNLVKIAEAFQTTYHKLVLANQNRTSLLGTLVRPEIL-NCIAGT 357

Query: 512 PVRN----SNNPGNYHPQINGAISSPSQAHHPCSTM-------------FNLHPNNANMH 384
           PVRN    S +  + HPQI+ ++ S  Q  H    M                HP+++N  
Sbjct: 358 PVRNLSYTSLHYQSTHPQISKSMYSSPQVQHQFQNMRQEKHQKIFTAQRQEKHPHSSNSQ 417

Query: 383 RPVQSN------------------QNTVVNVRPYH-------ANMN-----RPVQPNYNQ 294
             VQ+                   +NT +   P +       +N+N     +P Q  + Q
Sbjct: 418 YRVQNTRLEKHPSYLAKQGHESHPENTRLERHPNYFAMQKQESNVNTSTRKKPAQYYHGQ 477

Query: 293 AQQIWRAKPNS*RH 252
            QQ+WR K +   H
Sbjct: 478 GQQLWRPKSDGQGH 491


>ref|XP_004150639.1| PREDICTED: poly(A) RNA polymerase GLD2-like [Cucumis sativus]
           gi|449516431|ref|XP_004165250.1| PREDICTED: poly(A) RNA
           polymerase GLD2-like [Cucumis sativus]
          Length = 464

 Score = 63.9 bits (154), Expect = 3e-08
 Identities = 53/168 (31%), Positives = 73/168 (43%), Gaps = 27/168 (16%)
 Frame = -1

Query: 692 EDPFEQPVNTARSVIDKHLIRIADAFRTTHVTLTSHDHNRSTLLAALIRRDRLPNVTR-- 519
           EDPFEQP NTAR++  + L+RI++AFR TH+ LTS   NRS++L  L R    P +++  
Sbjct: 295 EDPFEQPENTARAINARQLMRISEAFRMTHLRLTSVYQNRSSILNDLAR----PQISQLI 350

Query: 518 -------STPVRNSNNPGNYHPQINGA--------ISSPSQAHHPCSTMFNL-------- 408
                  S P  N  N     PQ++ A        I    Q + P   M N         
Sbjct: 351 INSSGSASAPAFNVENYTPIRPQVHQARVMQPRPWIQHQFQNNIPRFNMGNFPAINSQAP 410

Query: 407 HPNNANMHRPVQSNQNTVVNV--RPYHANMNRPVQPNYNQAQQIWRAK 270
           H   +  H  VQ        +   P   N+  P +    Q QQ WR +
Sbjct: 411 HAGTSQSHPLVQHKTPKTKRIVSSPNVLNVGEPSKTYSGQGQQKWRPR 458


>gb|AFK47337.1| unknown [Lotus japonicus]
          Length = 159

 Score = 58.5 bits (140), Expect = 1e-06
 Identities = 52/158 (32%), Positives = 70/158 (44%), Gaps = 17/158 (10%)
 Frame = -1

Query: 692 EDPFEQPVNTARSVIDKHLIRIADAFRTTHVTLTSHDHNRSTLLAALIRRDRLPNVTR-- 519
           EDPFEQP NTARSV    L +I++AF  T+  LTS + N+++LL  L      P V+R  
Sbjct: 13  EDPFEQPQNTARSVSAGQLSKISEAFLRTYSVLTSKNQNQNSLLTFLAP----PEVSRLI 68

Query: 518 -STPVRNSNNPGNYH--PQINGAISSPSQAHHPCSTMFNLH------PNNANMH------ 384
               + N N  G Y   PQ+   +       H   +   +H       N  NM       
Sbjct: 69  IKPVIPNYNGGGGYFHPPQLPLHVQRAEHPRHQHRSQRRVHNGSQGTTNGQNMEAKDPIA 128

Query: 383 RPVQSNQNTVVNVRPYHANMNRPVQPNYNQAQQIWRAK 270
           +  + N N+  +  P       PVQ    Q QQIWR K
Sbjct: 129 KTQKGNSNSSTSKVP-------PVQ--VRQGQQIWRQK 157


>gb|AFK47290.1| unknown [Lotus japonicus]
          Length = 182

 Score = 58.5 bits (140), Expect = 1e-06
 Identities = 52/158 (32%), Positives = 70/158 (44%), Gaps = 17/158 (10%)
 Frame = -1

Query: 692 EDPFEQPVNTARSVIDKHLIRIADAFRTTHVTLTSHDHNRSTLLAALIRRDRLPNVTR-- 519
           EDPFEQP NTARSV    L +I++AF  T+  LTS + N+++LL  L      P V+R  
Sbjct: 36  EDPFEQPQNTARSVSAGQLSKISEAFLRTYSVLTSKNQNQNSLLTFLAP----PEVSRLI 91

Query: 518 -STPVRNSNNPGNYH--PQINGAISSPSQAHHPCSTMFNLH------PNNANMH------ 384
               + N N  G Y   PQ+   +       H   +   +H       N  NM       
Sbjct: 92  IKPVIPNYNGGGGYFHPPQLPLHVQRAEHPRHQHRSQRRVHNGSQGTTNGQNMEAKDPIA 151

Query: 383 RPVQSNQNTVVNVRPYHANMNRPVQPNYNQAQQIWRAK 270
           +  + N N+  +  P       PVQ    Q QQIWR K
Sbjct: 152 KTQKGNSNSSTSKVP-------PVQ--VRQGQQIWRQK 180


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