BLASTX nr result

ID: Angelica23_contig00017499 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica23_contig00017499
         (509 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABN10530.1| Lhca5 protein [Gentiana lutea]                         215   3e-54
ref|XP_002327136.1| light-harvesting complex I protein Lhca5 [Po...   211   4e-53
ref|XP_002284724.1| PREDICTED: chlorophyll a-b binding protein 4...   210   8e-53
ref|XP_002510221.1| chlorophyll A/B binding protein, putative [R...   201   4e-50
ref|XP_003570571.1| PREDICTED: chlorophyll a-b binding protein 7...   194   5e-48

>gb|ABN10530.1| Lhca5 protein [Gentiana lutea]
          Length = 272

 Score =  215 bits (547), Expect = 3e-54
 Identities = 111/166 (66%), Positives = 129/166 (77%), Gaps = 8/166 (4%)
 Frame = -2

Query: 475 ATSRGFQVLACSGTSSFTGKKIHKTSFTA----TYLPAQR---VHSQ-RQLITSIRAQER 320
           A+ + F+V A   +SS     I+     +    T LPA+     HS  R+L T +RAQ+R
Sbjct: 5   ASCKAFRVSALKDSSSIFTNNINTYQTLSLNKVTSLPAKSRGIFHSHGRRLCTVVRAQQR 64

Query: 319 PTWLPGLESPPYLDGTLPGDYGFDPLGLGEDPESLRWYVQAELVHARFAMAGVAGILLTD 140
           PTWLPGL+ PPYLDGTL GD+GFDPLGLGEDPESL+WYVQAELVH+RFAMAGVAGIL TD
Sbjct: 65  PTWLPGLDPPPYLDGTLAGDFGFDPLGLGEDPESLKWYVQAELVHSRFAMAGVAGILFTD 124

Query: 139 LLRVTGVSNLPVWYEAGTTKFSFASTTTLFIIQLLLMGFVETKRLM 2
           LLR TG+SNLPVWYEAG TKF FA+TTTLFI+Q+LLMGFVETKR M
Sbjct: 125 LLRTTGLSNLPVWYEAGATKFQFANTTTLFIVQMLLMGFVETKRYM 170


>ref|XP_002327136.1| light-harvesting complex I protein Lhca5 [Populus trichocarpa]
           gi|222835451|gb|EEE73886.1| light-harvesting complex I
           protein Lhca5 [Populus trichocarpa]
          Length = 266

 Score =  211 bits (538), Expect = 4e-53
 Identities = 109/164 (66%), Positives = 125/164 (76%), Gaps = 3/164 (1%)
 Frame = -2

Query: 484 MATATSRGFQVLACSGTSSFT-GKKIHKTSFTA--TYLPAQRVHSQRQLITSIRAQERPT 314
           MA A  R F +  C  +S  +  K I+K+SF A  T+LPA +  S R     + AQ+RPT
Sbjct: 1   MAVAMGRPFVIQPCLSSSLCSLSKNINKSSFGAAETFLPA-KPSSTRCTPVVVHAQQRPT 59

Query: 313 WLPGLESPPYLDGTLPGDYGFDPLGLGEDPESLRWYVQAELVHARFAMAGVAGILLTDLL 134
           WLPGL+ PPYLDGTL GD+GFDPLGLGEDP+SL+WYVQAELVHARFAMAGVAGIL TDLL
Sbjct: 60  WLPGLDPPPYLDGTLAGDFGFDPLGLGEDPQSLKWYVQAELVHARFAMAGVAGILFTDLL 119

Query: 133 RVTGVSNLPVWYEAGTTKFSFASTTTLFIIQLLLMGFVETKRLM 2
           RVTG+  LPVWYEAG  KF FAST TL ++QLLLMGF ETKR M
Sbjct: 120 RVTGIRKLPVWYEAGAVKFEFASTRTLIVVQLLLMGFAETKRYM 163


>ref|XP_002284724.1| PREDICTED: chlorophyll a-b binding protein 4, chloroplastic [Vitis
           vinifera] gi|302142320|emb|CBI19523.3| unnamed protein
           product [Vitis vinifera]
          Length = 264

 Score =  210 bits (535), Expect = 8e-53
 Identities = 108/162 (66%), Positives = 122/162 (75%), Gaps = 1/162 (0%)
 Frame = -2

Query: 484 MATATSRGFQVLACSGTSSFTGKKIHKTSFTA-TYLPAQRVHSQRQLITSIRAQERPTWL 308
           MA     GF V   S  S    K    T   A  +LPA+   S+    T ++AQ+RPTWL
Sbjct: 1   MAITVGTGFLVQPSSSLSLLGRKSCRPTLDVAYRFLPARPGPSRFSHGTVVQAQQRPTWL 60

Query: 307 PGLESPPYLDGTLPGDYGFDPLGLGEDPESLRWYVQAELVHARFAMAGVAGILLTDLLRV 128
           PGL+ PPYL+GTL GD+GFDPLGLGEDPE+LRWYVQAELVHARFAMAGVAGIL+TDLLRV
Sbjct: 61  PGLDPPPYLNGTLAGDFGFDPLGLGEDPENLRWYVQAELVHARFAMAGVAGILVTDLLRV 120

Query: 127 TGVSNLPVWYEAGTTKFSFASTTTLFIIQLLLMGFVETKRLM 2
           TG+SNLPVWYEAG  KF FAST  LFI+QL+LMGFVETKR M
Sbjct: 121 TGISNLPVWYEAGAVKFEFASTEALFIVQLILMGFVETKRYM 162


>ref|XP_002510221.1| chlorophyll A/B binding protein, putative [Ricinus communis]
           gi|223550922|gb|EEF52408.1| chlorophyll A/B binding
           protein, putative [Ricinus communis]
          Length = 269

 Score =  201 bits (512), Expect = 4e-50
 Identities = 103/166 (62%), Positives = 122/166 (73%), Gaps = 5/166 (3%)
 Frame = -2

Query: 484 MATATSRGFQVLACSGTS-SFTGKKIHKTSFTA--TYLPAQRVHSQRQLITS--IRAQER 320
           MA A  R       S +S  FT K I+K+S     T+  ++ V +  +  T   +RAQ+R
Sbjct: 1   MAVAMVRALVFQPWSSSSLCFTSKNINKSSSVVVDTFWSSKSVSTSSRCYTRAVVRAQQR 60

Query: 319 PTWLPGLESPPYLDGTLPGDYGFDPLGLGEDPESLRWYVQAELVHARFAMAGVAGILLTD 140
           PTWLPGL+SPPYLDGTL GDYGFDPLGLGEDPESL+WYVQAELVHARFAM G+AGIL TD
Sbjct: 61  PTWLPGLDSPPYLDGTLAGDYGFDPLGLGEDPESLKWYVQAELVHARFAMLGIAGILFTD 120

Query: 139 LLRVTGVSNLPVWYEAGTTKFSFASTTTLFIIQLLLMGFVETKRLM 2
           LLRVTG+  LPVWYEAG  K+ FAST TL ++QLL MG+ ET+R M
Sbjct: 121 LLRVTGIRKLPVWYEAGAVKYEFASTRTLLVVQLLWMGYAETRRYM 166


>ref|XP_003570571.1| PREDICTED: chlorophyll a-b binding protein 7, chloroplastic-like
           [Brachypodium distachyon]
          Length = 259

 Score =  194 bits (494), Expect = 5e-48
 Identities = 92/128 (71%), Positives = 105/128 (82%), Gaps = 1/128 (0%)
 Frame = -2

Query: 382 LPAQRVHSQR-QLITSIRAQERPTWLPGLESPPYLDGTLPGDYGFDPLGLGEDPESLRWY 206
           +P   V   R +++    A ER TWLPGL+ PPYLDGTLPGDYGFDPLGLGE+P  L+WY
Sbjct: 31  MPGHHVQPPRARVVARASAAERATWLPGLDPPPYLDGTLPGDYGFDPLGLGEEPADLKWY 90

Query: 205 VQAELVHARFAMAGVAGILLTDLLRVTGVSNLPVWYEAGTTKFSFASTTTLFIIQLLLMG 26
           VQAELVH RFAMAGVAGIL TDL+RV+G+SNLPVW+EAG TKF FA+TT LF +QLLLMG
Sbjct: 91  VQAELVHCRFAMAGVAGILGTDLIRVSGISNLPVWFEAGATKFDFANTTALFFVQLLLMG 150

Query: 25  FVETKRLM 2
           FVETKR M
Sbjct: 151 FVETKRYM 158


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