BLASTX nr result

ID: Angelica23_contig00017369 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica23_contig00017369
         (631 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI22109.3| unnamed protein product [Vitis vinifera]              136   3e-30
ref|XP_002279448.1| PREDICTED: pentatricopeptide repeat-containi...   136   3e-30
ref|XP_002533283.1| pentatricopeptide repeat-containing protein,...   108   8e-22
ref|XP_002299968.1| predicted protein [Populus trichocarpa] gi|2...   101   1e-19
ref|XP_002313272.1| predicted protein [Populus trichocarpa] gi|2...    98   1e-18

>emb|CBI22109.3| unnamed protein product [Vitis vinifera]
          Length = 386

 Score =  136 bits (343), Expect = 3e-30
 Identities = 77/139 (55%), Positives = 97/139 (69%), Gaps = 1/139 (0%)
 Frame = +2

Query: 173 SWICPIFLILSTPAVSYQVASLSTQASSSEKEVVDEVLSQILSAIEINPS-SSKEICTFH 349
           SWI P F ILS    SYQ  SL+T+AS  E+ V DE L++ILS IE +P  SS+++CT +
Sbjct: 47  SWILPFFAILSKSIGSYQ--SLATEASPDEEVVPDEFLNEILSDIERSPKFSSEKLCTTY 104

Query: 350 IEKLCKAKKLSCASRLQQSLHNNHIFLSPHAYNLLLEAAGEENDVDLLLQVFKDALFSGV 529
           I+KL KA   S A+R  QSLH+ HIFLSP+AYNLLL AA E N +D L Q+FKD L S  
Sbjct: 105 IDKLLKAGNPSAAARFMQSLHDKHIFLSPNAYNLLLVAASEANAIDFLSQIFKDLLVSNK 164

Query: 530 LMNSTSFINLAKGFTKMTD 586
            ++STS+ N+AK FTK  D
Sbjct: 165 PLSSTSYFNVAKVFTKTDD 183


>ref|XP_002279448.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g11900-like [Vitis vinifera]
          Length = 357

 Score =  136 bits (343), Expect = 3e-30
 Identities = 77/139 (55%), Positives = 97/139 (69%), Gaps = 1/139 (0%)
 Frame = +2

Query: 173 SWICPIFLILSTPAVSYQVASLSTQASSSEKEVVDEVLSQILSAIEINPS-SSKEICTFH 349
           SWI P F ILS    SYQ  SL+T+AS  E+ V DE L++ILS IE +P  SS+++CT +
Sbjct: 18  SWILPFFAILSKSIGSYQ--SLATEASPDEEVVPDEFLNEILSDIERSPKFSSEKLCTTY 75

Query: 350 IEKLCKAKKLSCASRLQQSLHNNHIFLSPHAYNLLLEAAGEENDVDLLLQVFKDALFSGV 529
           I+KL KA   S A+R  QSLH+ HIFLSP+AYNLLL AA E N +D L Q+FKD L S  
Sbjct: 76  IDKLLKAGNPSAAARFMQSLHDKHIFLSPNAYNLLLVAASEANAIDFLSQIFKDLLVSNK 135

Query: 530 LMNSTSFINLAKGFTKMTD 586
            ++STS+ N+AK FTK  D
Sbjct: 136 PLSSTSYFNVAKVFTKTDD 154


>ref|XP_002533283.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223526886|gb|EEF29094.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 405

 Score =  108 bits (270), Expect = 8e-22
 Identities = 66/171 (38%), Positives = 101/171 (59%)
 Frame = +2

Query: 74  FLNQSAIKRHIFGQESYQFQYIYHNRPMLSVKFSWICPIFLILSTPAVSYQVASLSTQAS 253
           F  Q    R  F ++S ++Q++     ++ V  + +   FL+     +  ++     +AS
Sbjct: 36  FQRQQQASRDAF-EQSGRYQHLTVASRLIEVPLTVVKLRFLLF----LPQRIRVSPIKAS 90

Query: 254 SSEKEVVDEVLSQILSAIEINPSSSKEICTFHIEKLCKAKKLSCASRLQQSLHNNHIFLS 433
            +E EV +  L+ IL+AI+  PSS +EICT ++ KLC +  L  A RL QSL N +I L 
Sbjct: 91  LNEDEVAEAYLNIILAAIQNAPSSIEEICTGYLHKLCNSGSLFVAVRLLQSLQNRNITLG 150

Query: 434 PHAYNLLLEAAGEENDVDLLLQVFKDALFSGVLMNSTSFINLAKGFTKMTD 586
           P+AYNL++EAAGE N  D++ +VFKD + S   + S+SFINLA+GF    D
Sbjct: 151 PNAYNLVMEAAGEANKADIVSRVFKDLMMSCKSLPSSSFINLARGFINTND 201


>ref|XP_002299968.1| predicted protein [Populus trichocarpa] gi|222847226|gb|EEE84773.1|
           predicted protein [Populus trichocarpa]
          Length = 352

 Score =  101 bits (251), Expect = 1e-19
 Identities = 55/118 (46%), Positives = 81/118 (68%), Gaps = 1/118 (0%)
 Frame = +2

Query: 236 LSTQASSSEKEVVDEVLSQILSAIEINP-SSSKEICTFHIEKLCKAKKLSCASRLQQSLH 412
           L+T+ S  E EV D+ L+Q+++A+E  P S++++I T ++  LCKA  L  A RL QSL 
Sbjct: 31  LTTRVSFDEGEVKDDNLNQMINAVENAPESATRKIGTAYVHNLCKAGNLFTAVRLLQSLC 90

Query: 413 NNHIFLSPHAYNLLLEAAGEENDVDLLLQVFKDALFSGVLMNSTSFINLAKGFTKMTD 586
           + +IFL P AYN++L AA E+ND+ +L QVFKD + S   + STS++ LA+GF K  D
Sbjct: 91  DKNIFLGPSAYNIILVAASEKNDIAILSQVFKDLIVSCQSLPSTSYLKLARGFVKTND 148


>ref|XP_002313272.1| predicted protein [Populus trichocarpa] gi|222849680|gb|EEE87227.1|
           predicted protein [Populus trichocarpa]
          Length = 382

 Score = 98.2 bits (243), Expect = 1e-18
 Identities = 54/138 (39%), Positives = 86/138 (62%), Gaps = 1/138 (0%)
 Frame = +2

Query: 176 WICPIFLILSTPAVSYQVASLSTQASSSEKEVVDEVLSQILSAIEINPS-SSKEICTFHI 352
           WI P F  ++     Y+   L+T+AS   +E+ D+ L+Q+L A+E  P  +++++ T ++
Sbjct: 43  WILPHFATITEVIGHYK--QLTTRASFDGEEIKDDNLNQMLEAVENAPECTTRKVGTAYV 100

Query: 353 EKLCKAKKLSCASRLQQSLHNNHIFLSPHAYNLLLEAAGEENDVDLLLQVFKDALFSGVL 532
             LCKA  L  A RL + L + +IFL P AYN++L  A E+NDV++L QVFKD + S   
Sbjct: 101 HNLCKAGTLFAAVRLLRLLRDKNIFLGPSAYNIILVTASEKNDVEILSQVFKDLILSFQS 160

Query: 533 MNSTSFINLAKGFTKMTD 586
           + S+ ++ LA+GF K  D
Sbjct: 161 LPSSLYLKLARGFVKSND 178


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