BLASTX nr result

ID: Angelica23_contig00017353 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica23_contig00017353
         (1080 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003543180.1| PREDICTED: nuclear pore complex protein Nup9...    66   2e-08
ref|XP_003543179.1| PREDICTED: nuclear pore complex protein Nup9...    66   2e-08
ref|XP_003539631.1| PREDICTED: uncharacterized protein LOC100789...    66   2e-08
emb|CBI34639.3| unnamed protein product [Vitis vinifera]               64   6e-08
ref|XP_002277144.1| PREDICTED: nuclear pore complex protein Nup9...    64   6e-08

>ref|XP_003543180.1| PREDICTED: nuclear pore complex protein Nup98-Nup96-like isoform 2
           [Glycine max]
          Length = 1010

 Score = 65.9 bits (159), Expect = 2e-08
 Identities = 34/62 (54%), Positives = 42/62 (67%)
 Frame = +3

Query: 618 SFLHVCDKPAPAKSPSLLNIRHLSSHRQRWLPIPKYNPKIDGPKVAFFNDAQKTPTTSRK 797
           S +   DKPAP +  SLL  RHLS  R R LP+ KY+ K DGPKVAFF+D + TPTT + 
Sbjct: 684 SSMPALDKPAPVRISSLLTSRHLSQRRIR-LPVRKYHSKNDGPKVAFFSDDEDTPTTPKA 742

Query: 798 EA 803
           +A
Sbjct: 743 DA 744


>ref|XP_003543179.1| PREDICTED: nuclear pore complex protein Nup98-Nup96-like isoform 1
           [Glycine max]
          Length = 1038

 Score = 65.9 bits (159), Expect = 2e-08
 Identities = 34/62 (54%), Positives = 42/62 (67%)
 Frame = +3

Query: 618 SFLHVCDKPAPAKSPSLLNIRHLSSHRQRWLPIPKYNPKIDGPKVAFFNDAQKTPTTSRK 797
           S +   DKPAP +  SLL  RHLS  R R LP+ KY+ K DGPKVAFF+D + TPTT + 
Sbjct: 690 SSMPALDKPAPVRISSLLTSRHLSQRRIR-LPVRKYHSKNDGPKVAFFSDDEDTPTTPKA 748

Query: 798 EA 803
           +A
Sbjct: 749 DA 750


>ref|XP_003539631.1| PREDICTED: uncharacterized protein LOC100789177 [Glycine max]
          Length = 1007

 Score = 65.9 bits (159), Expect = 2e-08
 Identities = 34/62 (54%), Positives = 42/62 (67%)
 Frame = +3

Query: 618 SFLHVCDKPAPAKSPSLLNIRHLSSHRQRWLPIPKYNPKIDGPKVAFFNDAQKTPTTSRK 797
           S +   DKPAP +  SLL  RHLS  R R LP+ KY+ K DGPKVAFF+D + TPTT + 
Sbjct: 681 SSMPALDKPAPVRISSLLTSRHLSQRRIR-LPVRKYHSKNDGPKVAFFSDDEDTPTTPKA 739

Query: 798 EA 803
           +A
Sbjct: 740 DA 741


>emb|CBI34639.3| unnamed protein product [Vitis vinifera]
          Length = 1047

 Score = 63.9 bits (154), Expect = 6e-08
 Identities = 33/62 (53%), Positives = 42/62 (67%)
 Frame = +3

Query: 618 SFLHVCDKPAPAKSPSLLNIRHLSSHRQRWLPIPKYNPKIDGPKVAFFNDAQKTPTTSRK 797
           S + V DKPAP +  SLL  RHLS  R R LP  KY+PK D PKV FF+D ++TP+T + 
Sbjct: 699 SSMPVVDKPAPVRISSLLTSRHLSQRRIR-LPARKYHPKNDAPKVPFFSDDEETPSTPKA 757

Query: 798 EA 803
           +A
Sbjct: 758 DA 759


>ref|XP_002277144.1| PREDICTED: nuclear pore complex protein Nup98-Nup96-like isoform 1
           [Vitis vinifera]
          Length = 1013

 Score = 63.9 bits (154), Expect = 6e-08
 Identities = 33/62 (53%), Positives = 42/62 (67%)
 Frame = +3

Query: 618 SFLHVCDKPAPAKSPSLLNIRHLSSHRQRWLPIPKYNPKIDGPKVAFFNDAQKTPTTSRK 797
           S + V DKPAP +  SLL  RHLS  R R LP  KY+PK D PKV FF+D ++TP+T + 
Sbjct: 682 SSMPVVDKPAPVRISSLLTSRHLSQRRIR-LPARKYHPKNDAPKVPFFSDDEETPSTPKA 740

Query: 798 EA 803
           +A
Sbjct: 741 DA 742


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