BLASTX nr result

ID: Angelica23_contig00017351 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica23_contig00017351
         (1728 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003519872.1| PREDICTED: zinc finger CCCH domain-containin...    70   2e-09
ref|XP_002530750.1| conserved hypothetical protein [Ricinus comm...    66   3e-08
ref|XP_003523552.1| PREDICTED: zinc finger CCCH domain-containin...    66   3e-08
ref|XP_002306911.1| predicted protein [Populus trichocarpa] gi|2...    65   7e-08
ref|XP_002510504.1| nucleic acid binding protein, putative [Rici...    64   1e-07

>ref|XP_003519872.1| PREDICTED: zinc finger CCCH domain-containing protein 6-like [Glycine
            max]
          Length = 520

 Score = 69.7 bits (169), Expect = 2e-09
 Identities = 73/255 (28%), Positives = 106/255 (41%), Gaps = 10/255 (3%)
 Frame = -1

Query: 1200 LVPSPRTEFTLSKANLLPAANIGPLPLAFS--HSNPLMQAVAHPENHGNCINDKGVHGGF 1027
            LV +P  + T S     P + +G LP  F    SNP +          + +N   +    
Sbjct: 294  LVSTPTPDVTASWTT--PTSAVGSLPSGFGLKPSNPSV----------SLLNPTPILSVP 341

Query: 1026 GLPRASFQPTANVLRSFQHMIPISPEV-YPRPVLGVNDPVCMPVTKLMTSLGLDPSPGAD 850
             +P  S       L S  H  P++  V   RPV G      MPVT  ++ L    +P  D
Sbjct: 342  AIPSVS-------LLSSSHDKPVTASVPLSRPVPG------MPVTPSVSML-THHTPAPD 387

Query: 849  LFTLPKANSQPTGDMGPLPLAFSHTNPLMPAVALPENRGNFLGDETGQHRGMQRTLDYGF 670
            +      N         +P A ++ +    A+A    R N+  +   QH   ++ +    
Sbjct: 388  MHRPVSKNFHHVSS--GMPPALNNQSQQETAMASGPKRANYYKNLIRQHGADKQDIQDSH 445

Query: 669  LSL-HENTQV------VGQGLSLPKPQKPCIYFNSPKGCRNGTSCPYMHIRSEQPAPPQV 511
            + + H N Q       + Q    PK  KPCIYF SP+GCRNG++C Y H  S Q     V
Sbjct: 446  IGIRHSNFQDMKPVHNIKQREVKPKILKPCIYFKSPRGCRNGSNCSYQHDVSAQEGAGNV 505

Query: 510  EALHGAKRMKLG*ES 466
                 AKR+KLG E+
Sbjct: 506  LRAQSAKRLKLGGEN 520


>ref|XP_002530750.1| conserved hypothetical protein [Ricinus communis]
            gi|223529714|gb|EEF31656.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 497

 Score = 66.2 bits (160), Expect = 3e-08
 Identities = 57/193 (29%), Positives = 87/193 (45%), Gaps = 5/193 (2%)
 Frame = -1

Query: 1020 PRASFQPTANVLRSFQHMIPISPEVYPRPVLGVNDPVCMPVTKLMTSLGLDPSPGADLFT 841
            P    +PTA++  + Q  + IS    P+P +         V   ++S+    +P +    
Sbjct: 317  PIPGSKPTASISLARQQSVNIS---IPKPAVSNMYTKPDQVQSTVSSIPAQLAPKSFAEL 373

Query: 840  LPKANSQPTGDMGPLPLAFSHTNPLMPAVALPENRGNFLGDETGQHRGMQRTLDYGFLSL 661
             P  N    G +    ++ + TNP+           N++ D   +H   +      +   
Sbjct: 374  KPNPNPIYGGTLQANAVS-TKTNPVKDI--------NYIKDLIREHGSDKHNEHMSYNGP 424

Query: 660  HENTQVV----GQGLSLPKPQKPCIYFNSPKGCRNGTSCPYMHIRSEQ-PAPPQVEALHG 496
            H    ++    GQ    PK QKPC+Y+ SPKGCRNG++CPY H  S Q      +EA + 
Sbjct: 425  HATNHILIKEFGQNNLRPKFQKPCMYYRSPKGCRNGSNCPYQHDLSFQFQTGGNLEAPY- 483

Query: 495  AKRMKLG*ESTGR 457
            AKRMKL  E TGR
Sbjct: 484  AKRMKLDGEITGR 496


>ref|XP_003523552.1| PREDICTED: zinc finger CCCH domain-containing protein 6-like
           [Glycine max]
          Length = 430

 Score = 65.9 bits (159), Expect = 3e-08
 Identities = 47/149 (31%), Positives = 65/149 (43%), Gaps = 16/149 (10%)
 Frame = -1

Query: 876 GLDPSPGADLFTLPKANSQPTGDMG--------PLPLAFSHTNPLMPAVALPENRGNFLG 721
           G   +P + +F+   + + P G           P P A S      P    P    N+  
Sbjct: 277 GQTTTPSSVVFSTTSSYTPPIGGQAEPVTTQWPPRP-AVSSAIVSSPIEVPPARDVNYYK 335

Query: 720 DETGQHRGMQRTLDYGF-------LSLHENTQVVGQG-LSLPKPQKPCIYFNSPKGCRNG 565
               QH G + TL Y          + +E T    +G +S PK  KPCI+FNS +GCRNG
Sbjct: 336 SLIQQHGGHKETLPYSSKRQIPQAATNYETTSYNHRGKVSKPKIMKPCIFFNSSRGCRNG 395

Query: 564 TSCPYMHIRSEQPAPPQVEALHGAKRMKL 478
            +C Y H  S QP    V  +  +KRMK+
Sbjct: 396 ANCAYQHDASFQPRGNTVSGIQSSKRMKM 424


>ref|XP_002306911.1| predicted protein [Populus trichocarpa] gi|222856360|gb|EEE93907.1|
           predicted protein [Populus trichocarpa]
          Length = 398

 Score = 64.7 bits (156), Expect = 7e-08
 Identities = 44/152 (28%), Positives = 66/152 (43%), Gaps = 10/152 (6%)
 Frame = -1

Query: 903 PVTKLMTSLGLDPSPGADLFTLPKANSQPTGDMGPLPLA--FSHTNPLMPAVALPENRG- 733
           P+ + +T   L  +P    +T P         MG LP A       P  P++   + +  
Sbjct: 249 PLAESITQASLTATPSGSFYTQPNGTG-----MGVLPSARVLPPGVPSSPSIGATQTKDM 303

Query: 732 NFLGDETGQHRGMQRTLDYGFLSLHENTQVVGQGL-------SLPKPQKPCIYFNSPKGC 574
           ++  +   QH G ++     F   + +     Q L       S  K  KPCIYFN+P+GC
Sbjct: 304 SYYKNLIQQHGGDRQETPQQFGGRYNHQIGTSQDLVNSKSRESKHKIMKPCIYFNTPRGC 363

Query: 573 RNGTSCPYMHIRSEQPAPPQVEALHGAKRMKL 478
           RNG +C Y H  S Q     +  +  AKRMK+
Sbjct: 364 RNGANCAYQHDSSSQKKGSSIAEVQSAKRMKM 395


>ref|XP_002510504.1| nucleic acid binding protein, putative [Ricinus communis]
           gi|223551205|gb|EEF52691.1| nucleic acid binding
           protein, putative [Ricinus communis]
          Length = 461

 Score = 63.9 bits (154), Expect = 1e-07
 Identities = 53/185 (28%), Positives = 85/185 (45%), Gaps = 13/185 (7%)
 Frame = -1

Query: 993 NVLRSFQHMIPISPEVYPRPVLGVNDPVCMPV--TKLMTSLGLDPSPGADLFTLPKANSQ 820
           NV +     +P+S    P P + ++DP  M +  T++ T+     +     +      +Q
Sbjct: 278 NVPKPAPSFVPLSDPPPPPPPVSLSDPSYMHMNRTEMNTTSSFAATSSGPFY------AQ 331

Query: 819 PTG-DMGPLPLAFSHTNPLMPA--VALPENRG-NFLGDETGQHRGMQRTLDYGFLSLHEN 652
           P G   G LP A     P +PA  V +P+ +  N+  +   QH G ++   + + + +  
Sbjct: 332 PNGAGPGYLPNA-QVPPPAVPASSVGVPQVKDMNYYKNLIQQHGGERQEAPHQYGNRYSQ 390

Query: 651 TQVVGQGLSLPKPQ-------KPCIYFNSPKGCRNGTSCPYMHIRSEQPAPPQVEALHGA 493
                Q L  PK +       KPCIYFNS +GCR+G +C Y H  S Q     +  +  A
Sbjct: 391 LAGTNQELVNPKSRELKPKIMKPCIYFNSSRGCRHGANCAYQHDPSFQQRSSAISEVQSA 450

Query: 492 KRMKL 478
           KRMK+
Sbjct: 451 KRMKV 455


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