BLASTX nr result
ID: Angelica23_contig00017328
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Angelica23_contig00017328
(1053 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_003632699.1| PREDICTED: pentatricopeptide repeat-containi... 344 2e-92
ref|XP_002528578.1| pentatricopeptide repeat-containing protein,... 340 4e-91
ref|XP_002316451.1| predicted protein [Populus trichocarpa] gi|2... 336 5e-90
ref|XP_003520679.1| PREDICTED: pentatricopeptide repeat-containi... 301 2e-79
ref|NP_196771.1| pentatricopeptide repeat-containing protein [Ar... 287 3e-75
>ref|XP_003632699.1| PREDICTED: pentatricopeptide repeat-containing protein At5g12100,
mitochondrial-like [Vitis vinifera]
Length = 819
Score = 344 bits (883), Expect = 2e-92
Identities = 171/297 (57%), Positives = 211/297 (71%)
Frame = -2
Query: 1049 NMVSRGVLPNAQIYNILIDGYCTVGKLNYAFRCLSEMSEKNVLPTIVTYNTLINGLCRKG 870
+MV RGV+PNAQIYN+LIDG C GKL AFR EM + ++PT+VTYN LINGLC+KG
Sbjct: 522 DMVHRGVVPNAQIYNMLIDGSCIAGKLKDAFRFFDEMVAREIVPTLVTYNILINGLCKKG 581
Query: 869 KVVEAEELASQIPSKGLYPDVITYNSLISAYAKVGNNLKGLELYEKMKTSGIKPTLITYH 690
KV+EAE LAS+I KGL DVITYNSLIS Y+ GN K LELYE MK SGIKPTL TYH
Sbjct: 582 KVMEAENLASEITRKGLSFDVITYNSLISGYSSAGNVQKALELYETMKKSGIKPTLNTYH 641
Query: 689 LLSSGFIKDGPAVAEKLFQELLDNNLTPDRVIYNKLISCYAEHKDIHKAFSIHCQMIDQG 510
L +G K+G + EK++QE+L NL PDRVIYN LI CY EH D+ KA S+H M QG
Sbjct: 642 RLIAGCGKEGLVLVEKIYQEMLQMNLVPDRVIYNALIHCYVEHGDVQKACSLHSAMEAQG 701
Query: 509 IQPDCFTYNSLIMCRLKEGKIKEAKELFEDMRNKELVPNADTYNTLVEGHCRVEDFNGAY 330
IQPD TYN LI+ KEG++ + K L DM+ + L+P +TY+ L+ GHC+++DF+GAY
Sbjct: 702 IQPDKMTYNCLILGHFKEGRMHKVKNLVNDMKIRGLIPKTETYDILIVGHCKLKDFDGAY 761
Query: 329 FWYREMSGKGIVPGVDICNELISGLRDEGRLEYVEIIYSEMRVKGLVDGNTAEELSA 159
WYREM G P V IC+ LI+GLR+EGR ++I SEM +KG D E+ SA
Sbjct: 762 VWYREMFENGFTPSVSICDNLITGLREEGRSHDADVICSEMNMKGKDDCRADEDASA 818
Score = 172 bits (436), Expect = 1e-40
Identities = 101/291 (34%), Positives = 163/291 (56%), Gaps = 3/291 (1%)
Frame = -2
Query: 1052 ENMVSRGVLPNAQIYNILIDGYCTVGKLNYAFRCLSEMSEKNVLPTIVTYNTLINGLCRK 873
+ M+ R V PN YN LIDGYC VG+L AF M +NV PTI+T+N+L+NGLCR
Sbjct: 241 DEMLDRRVAPNRITYNTLIDGYCKVGQLEEAFNIRERMKVENVEPTIITFNSLLNGLCRA 300
Query: 872 GKVVEAEELASQIPSKGLYPDVITYNSLISAYAKVGNNLKGLELYEKMKTSGIKPTLITY 693
+ EA+ + ++ G PD TY +L + K GN + L E+ G++ T
Sbjct: 301 QMMEEAQRVLEEMEVYGFVPDRFTYTTLFDGHLKCGNVDASITLSEEAVRKGVQILDYTC 360
Query: 692 HLLSSGFIKDG-PAVAEKLFQELLDNNLTPDRVIYNKLISCYAEHKDIHKAFSIHCQMID 516
+L + K+G AE++ ++ L+N L P V +N +++ Y + DI+KA++ +M
Sbjct: 361 SILLNALCKEGNMEKAEEVLKKFLENGLAPVGVFFNTIVNGYCQVGDINKAYTTIEKMEA 420
Query: 515 QGIQPDCFTYNSLI--MCRLKEGKIKEAKELFEDMRNKELVPNADTYNTLVEGHCRVEDF 342
G++P+ TYNSL+ C +K ++EA++ + M K ++PN +TYNTL++G+ R F
Sbjct: 421 VGLRPNHVTYNSLVKKFCEMK--NMEEAEKCIKKMVEKGVLPNVETYNTLIDGYGRSCLF 478
Query: 341 NGAYFWYREMSGKGIVPGVDICNELISGLRDEGRLEYVEIIYSEMRVKGLV 189
+ + EM KG+ P V LI+ L + + E+I +M +G+V
Sbjct: 479 DRCFQILEEMEKKGLKPNVISYGCLINCLCKDANILEAEVILGDMVHRGVV 529
Score = 151 bits (382), Expect = 2e-34
Identities = 89/288 (30%), Positives = 150/288 (52%), Gaps = 1/288 (0%)
Frame = -2
Query: 1052 ENMVSRGVLPNAQIYNILIDGYCTVGKLNYAFRCLSEMSEKNVLPTIVTYNTLINGLCRK 873
E M G +P+ Y L DG+ G ++ + E K V T + L+N LC++
Sbjct: 311 EEMEVYGFVPDRFTYTTLFDGHLKCGNVDASITLSEEAVRKGVQILDYTCSILLNALCKE 370
Query: 872 GKVVEAEELASQIPSKGLYPDVITYNSLISAYAKVGNNLKGLELYEKMKTSGIKPTLITY 693
G + +AEE+ + GL P + +N++++ Y +VG+ K EKM+ G++P +TY
Sbjct: 371 GNMEKAEEVLKKFLENGLAPVGVFFNTIVNGYCQVGDINKAYTTIEKMEAVGLRPNHVTY 430
Query: 692 HLLSSGFIK-DGPAVAEKLFQELLDNNLTPDRVIYNKLISCYAEHKDIHKAFSIHCQMID 516
+ L F + AEK +++++ + P+ YN LI Y + F I +M
Sbjct: 431 NSLVKKFCEMKNMEEAEKCIKKMVEKGVLPNVETYNTLIDGYGRSCLFDRCFQILEEMEK 490
Query: 515 QGIQPDCFTYNSLIMCRLKEGKIKEAKELFEDMRNKELVPNADTYNTLVEGHCRVEDFNG 336
+G++P+ +Y LI C K+ I EA+ + DM ++ +VPNA YN L++G C
Sbjct: 491 KGLKPNVISYGCLINCLCKDANILEAEVILGDMVHRGVVPNAQIYNMLIDGSCIAGKLKD 550
Query: 335 AYFWYREMSGKGIVPGVDICNELISGLRDEGRLEYVEIIYSEMRVKGL 192
A+ ++ EM + IVP + N LI+GL +G++ E + SE+ KGL
Sbjct: 551 AFRFFDEMVAREIVPTLVTYNILINGLCKKGKVMEAENLASEITRKGL 598
Score = 135 bits (341), Expect = 1e-29
Identities = 78/287 (27%), Positives = 146/287 (50%), Gaps = 1/287 (0%)
Frame = -2
Query: 1046 MVSRGVLPNAQIYNILIDGYCTVGKLNYAFRCLSEMSEKNVLPTIVTYNTLINGLCRKGK 867
+V G+ P+ +Y I +G L A ++ M V P + YN +I GLC++ +
Sbjct: 173 IVESGLRPDQFMYGKAIQAAVKLGDLKRAIELMTCMKRGGVSPGVFVYNVVIGGLCKEKR 232
Query: 866 VVEAEELASQIPSKGLYPDVITYNSLISAYAKVGNNLKGLELYEKMKTSGIKPTLITYHL 687
+ +AE+L ++ + + P+ ITYN+LI Y KVG + + E+MK ++PT+IT++
Sbjct: 233 MKDAEKLFDEMLDRRVAPNRITYNTLIDGYCKVGQLEEAFNIRERMKVENVEPTIITFNS 292
Query: 686 LSSGFIK-DGPAVAEKLFQELLDNNLTPDRVIYNKLISCYAEHKDIHKAFSIHCQMIDQG 510
L +G + A+++ +E+ PDR Y L + + ++ + ++ + + +G
Sbjct: 293 LLNGLCRAQMMEEAQRVLEEMEVYGFVPDRFTYTTLFDGHLKCGNVDASITLSEEAVRKG 352
Query: 509 IQPDCFTYNSLIMCRLKEGKIKEAKELFEDMRNKELVPNADTYNTLVEGHCRVEDFNGAY 330
+Q +T + L+ KEG +++A+E+ + L P +NT+V G+C+V D N AY
Sbjct: 353 VQILDYTCSILLNALCKEGNMEKAEEVLKKFLENGLAPVGVFFNTIVNGYCQVGDINKAY 412
Query: 329 FWYREMSGKGIVPGVDICNELISGLRDEGRLEYVEIIYSEMRVKGLV 189
+M G+ P N L+ + +E E +M KG++
Sbjct: 413 TTIEKMEAVGLRPNHVTYNSLVKKFCEMKNMEEAEKCIKKMVEKGVL 459
Score = 104 bits (259), Expect = 4e-20
Identities = 64/219 (29%), Positives = 111/219 (50%), Gaps = 1/219 (0%)
Frame = -2
Query: 842 SQIPSKGLYPDVITYNSLISAYAKVGNNLKGLELYEKMKTSGIKPTLITYHLLSSGFIKD 663
S P K L+ D++ S+ S V + ELY MK G+ P++ + +L +
Sbjct: 106 SSTPMKPLFSDMLL--SICSESKMVSESA---ELYMLMKKDGVLPSVASLNLFLESLVST 160
Query: 662 GPAVAE-KLFQELLDNNLTPDRVIYNKLISCYAEHKDIHKAFSIHCQMIDQGIQPDCFTY 486
+LF E++++ L PD+ +Y K I + D+ +A + M G+ P F Y
Sbjct: 161 KRYEDTLQLFSEIVESGLRPDQFMYGKAIQAAVKLGDLKRAIELMTCMKRGGVSPGVFVY 220
Query: 485 NSLIMCRLKEGKIKEAKELFEDMRNKELVPNADTYNTLVEGHCRVEDFNGAYFWYREMSG 306
N +I KE ++K+A++LF++M ++ + PN TYNTL++G+C+V A+ M
Sbjct: 221 NVVIGGLCKEKRMKDAEKLFDEMLDRRVAPNRITYNTLIDGYCKVGQLEEAFNIRERMKV 280
Query: 305 KGIVPGVDICNELISGLRDEGRLEYVEIIYSEMRVKGLV 189
+ + P + N L++GL +E + + EM V G V
Sbjct: 281 ENVEPTIITFNSLLNGLCRAQMMEEAQRVLEEMEVYGFV 319
Score = 58.9 bits (141), Expect = 2e-06
Identities = 36/131 (27%), Positives = 65/131 (49%)
Frame = -2
Query: 1052 ENMVSRGVLPNAQIYNILIDGYCTVGKLNYAFRCLSEMSEKNVLPTIVTYNTLINGLCRK 873
+ M+ ++P+ IYN LI Y G + A S M + + P +TYN LI G ++
Sbjct: 660 QEMLQMNLVPDRVIYNALIHCYVEHGDVQKACSLHSAMEAQGIQPDKMTYNCLILGHFKE 719
Query: 872 GKVVEAEELASQIPSKGLYPDVITYNSLISAYAKVGNNLKGLELYEKMKTSGIKPTLITY 693
G++ + + L + + +GL P TY+ LI + K+ + Y +M +G P++
Sbjct: 720 GRMHKVKNLVNDMKIRGLIPKTETYDILIVGHCKLKDFDGAYVWYREMFENGFTPSVSIC 779
Query: 692 HLLSSGFIKDG 660
L +G ++G
Sbjct: 780 DNLITGLREEG 790
>ref|XP_002528578.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223531974|gb|EEF33786.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 817
Score = 340 bits (871), Expect = 4e-91
Identities = 169/302 (55%), Positives = 214/302 (70%), Gaps = 1/302 (0%)
Frame = -2
Query: 1049 NMVSRGVLPNAQIYNILIDGYCTVGKLNYAFRCLSEMSEKNVLPTIVTYNTLINGLCRKG 870
+M+ RGVLPNAQ+YN+LIDG C VGK+ A R EM + PT+VTYN LI+GLC+KG
Sbjct: 516 DMICRGVLPNAQVYNMLIDGSCMVGKVKDALRFFDEMMRSEISPTLVTYNVLIDGLCKKG 575
Query: 869 KVVEAEELASQIPSKGLYPDVITYNSLISAYAKVGNNLKGLELYEKMKTSGIKPTLITYH 690
K+ EAE+ +QI S G PDVITYNSLIS YA GN K L LYE MK GIKPT+ TYH
Sbjct: 576 KLTEAEDFLTQITSSGHSPDVITYNSLISGYANAGNVSKCLGLYETMKNLGIKPTVRTYH 635
Query: 689 LLSSGFIKDGPAVAEKLFQELLDNNLTPDRVIYNKLISCYAEHKDIHKAFSIHCQMIDQG 510
L SG K+G + EKL+ E+L NL PDRV+YN +I CYAE + KA+S+H M+DQG
Sbjct: 636 PLISGCSKEGIELVEKLYNEMLQMNLLPDRVVYNAMIHCYAEIGNTQKAYSLHQGMLDQG 695
Query: 509 IQPDCFTYNSLIMCRLKEGKIKEAKELFEDMRNKELVPNADTYNTLVEGHCRVEDFNGAY 330
I PD TYNSLI+ +EGK+ K+L +M+ KEL P ADTY+ LV+GHC ++DF+GAY
Sbjct: 696 IHPDKMTYNSLILGHFREGKLSNIKDLVNNMKAKELAPKADTYDILVKGHCDLKDFSGAY 755
Query: 329 FWYREMSGKGIVPGVDICNELISGLRDEGRLEYVEIIYSEMRVKGLVD-GNTAEELSAGA 153
WYREM +P ICNEL +GL EGRL+ V++I SEM VKG+++ + EE+SA A
Sbjct: 756 VWYREMVENNFLPNASICNELTAGLEQEGRLQEVQVICSEMNVKGIINHWPSKEEISAVA 815
Query: 152 KL 147
K+
Sbjct: 816 KM 817
Score = 167 bits (422), Expect = 5e-39
Identities = 95/291 (32%), Positives = 161/291 (55%), Gaps = 3/291 (1%)
Frame = -2
Query: 1052 ENMVSRGVLPNAQIYNILIDGYCTVGKLNYAFRCLSEMSEKNVLPTIVTYNTLINGLCRK 873
+ M + ++ + YN LIDGYC VG+L+ AF+ M EK+V P I+T+N+L++GLC+
Sbjct: 235 DEMCNINLVGSIVTYNTLIDGYCKVGELDAAFKMRERMKEKSVAPNIITFNSLLSGLCKM 294
Query: 872 GKVVEAEELASQIPSKGLYPDVITYNSLISAYAKVGNNLKGLELYEKMKTSGIKPTLITY 693
K+ EA L ++ G PD TY+ L + + +ELYE+ GI+ T
Sbjct: 295 RKMKEARSLLKEMEVNGFMPDGYTYSILFDGLLRCDDGNGAMELYEQATEKGIRINNYTG 354
Query: 692 HLLSSGFIKDGPA-VAEKLFQELLDNNLTPDRVIYNKLISCYAEHKDIHKAFSIHCQMID 516
+L +G K G AE++ ++ +N L D VIYN ++ Y D++KA +M
Sbjct: 355 SILLNGLCKQGKVEKAEEILKKFTENGLVADEVIYNTFVNGYCRIGDMNKAILTIERMES 414
Query: 515 QGIQPDCFTYNSLI--MCRLKEGKIKEAKELFEDMRNKELVPNADTYNTLVEGHCRVEDF 342
G++P+ T+NSLI C +KE + +A+E + M K + P+ +TYNTL++G+ ++ F
Sbjct: 415 FGLRPNSITFNSLIDKFCDMKE--MDKAEEWVKKMAEKGVTPSVETYNTLIDGYGKLCTF 472
Query: 341 NGAYFWYREMSGKGIVPGVDICNELISGLRDEGRLEYVEIIYSEMRVKGLV 189
+ + +M G+ P V LI+ L +G++ EI+ +M +G++
Sbjct: 473 DRCFQILEQMEEIGVKPNVVSYGSLINCLCKDGKILEAEIVLRDMICRGVL 523
Score = 157 bits (396), Expect = 5e-36
Identities = 92/288 (31%), Positives = 152/288 (52%), Gaps = 2/288 (0%)
Frame = -2
Query: 1052 ENMVSRGVLPNAQIYNILIDGYCTVGKLNYAFRCLSEMSEKNVLPTIVTYNTLINGLCRK 873
+ M G +P+ Y+IL DG N A + +EK + T + L+NGLC++
Sbjct: 305 KEMEVNGFMPDGYTYSILFDGLLRCDDGNGAMELYEQATEKGIRINNYTGSILLNGLCKQ 364
Query: 872 GKVVEAEELASQIPSKGLYPDVITYNSLISAYAKVGNNLKGLELYEKMKTSGIKPTLITY 693
GKV +AEE+ + GL D + YN+ ++ Y ++G+ K + E+M++ G++P IT+
Sbjct: 365 GKVEKAEEILKKFTENGLVADEVIYNTFVNGYCRIGDMNKAILTIERMESFGLRPNSITF 424
Query: 692 HLLSSGF--IKDGPAVAEKLFQELLDNNLTPDRVIYNKLISCYAEHKDIHKAFSIHCQMI 519
+ L F +K+ AE+ +++ + +TP YN LI Y + + F I QM
Sbjct: 425 NSLIDKFCDMKEMDK-AEEWVKKMAEKGVTPSVETYNTLIDGYGKLCTFDRCFQILEQME 483
Query: 518 DQGIQPDCFTYNSLIMCRLKEGKIKEAKELFEDMRNKELVPNADTYNTLVEGHCRVEDFN 339
+ G++P+ +Y SLI C K+GKI EA+ + DM + ++PNA YN L++G C V
Sbjct: 484 EIGVKPNVVSYGSLINCLCKDGKILEAEIVLRDMICRGVLPNAQVYNMLIDGSCMVGKVK 543
Query: 338 GAYFWYREMSGKGIVPGVDICNELISGLRDEGRLEYVEIIYSEMRVKG 195
A ++ EM I P + N LI GL +G+L E +++ G
Sbjct: 544 DALRFFDEMMRSEISPTLVTYNVLIDGLCKKGKLTEAEDFLTQITSSG 591
Score = 130 bits (326), Expect = 7e-28
Identities = 80/275 (29%), Positives = 132/275 (48%), Gaps = 1/275 (0%)
Frame = -2
Query: 1013 IYNILIDGYCTVGKLNYAFRCLSEMSEKNVLPTIVTYNTLINGLCRKGKVVEAEELASQI 834
+Y I + L L M ++ V P + YN LI GLCR+ ++ +AE++ ++
Sbjct: 178 MYAKAIQAAVKLQNLKMGMEFLDSMRKRGVRPNVFIYNVLIGGLCREKRIRDAEKMFDEM 237
Query: 833 PSKGLYPDVITYNSLISAYAKVGNNLKGLELYEKMKTSGIKPTLITYHLLSSGFIK-DGP 657
+ L ++TYN+LI Y KVG ++ E+MK + P +IT++ L SG K
Sbjct: 238 CNINLVGSIVTYNTLIDGYCKVGELDAAFKMRERMKEKSVAPNIITFNSLLSGLCKMRKM 297
Query: 656 AVAEKLFQELLDNNLTPDRVIYNKLISCYAEHKDIHKAFSIHCQMIDQGIQPDCFTYNSL 477
A L +E+ N PD Y+ L D + A ++ Q ++GI+ + +T + L
Sbjct: 298 KEARSLLKEMEVNGFMPDGYTYSILFDGLLRCDDGNGAMELYEQATEKGIRINNYTGSIL 357
Query: 476 IMCRLKEGKIKEAKELFEDMRNKELVPNADTYNTLVEGHCRVEDFNGAYFWYREMSGKGI 297
+ K+GK+++A+E+ + LV + YNT V G+CR+ D N A M G+
Sbjct: 358 LNGLCKQGKVEKAEEILKKFTENGLVADEVIYNTFVNGYCRIGDMNKAILTIERMESFGL 417
Query: 296 VPGVDICNELISGLRDEGRLEYVEIIYSEMRVKGL 192
P N LI D ++ E +M KG+
Sbjct: 418 RPNSITFNSLIDKFCDMKEMDKAEEWVKKMAEKGV 452
Score = 126 bits (317), Expect = 8e-27
Identities = 80/274 (29%), Positives = 137/274 (50%), Gaps = 1/274 (0%)
Frame = -2
Query: 1007 NILIDGYCTVGKLNYAFRCLSEMSEKNVLPTIVTYNTLINGLCRKGKVVEAEELASQIPS 828
++L+ C L A M LP++V+ + L + L + + V+ +L +I +
Sbjct: 110 DMLLSVCCKSKMLREAVELYEFMRRDGKLPSLVSLSLLFSCLVNEKQFVKVVDLFMEIEN 169
Query: 827 KGLYPDVITYNSLISAYAKVGNNLKGLELYEKMKTSGIKPTLITYHLLSSGFIKDGP-AV 651
G D Y I A K+ N G+E + M+ G++P + Y++L G ++
Sbjct: 170 SGFRTDTFMYAKAIQAAVKLQNLKMGMEFLDSMRKRGVRPNVFIYNVLIGGLCREKRIRD 229
Query: 650 AEKLFQELLDNNLTPDRVIYNKLISCYAEHKDIHKAFSIHCQMIDQGIQPDCFTYNSLIM 471
AEK+F E+ + NL V YN LI Y + ++ AF + +M ++ + P+ T+NSL+
Sbjct: 230 AEKMFDEMCNINLVGSIVTYNTLIDGYCKVGELDAAFKMRERMKEKSVAPNIITFNSLLS 289
Query: 470 CRLKEGKIKEAKELFEDMRNKELVPNADTYNTLVEGHCRVEDFNGAYFWYREMSGKGIVP 291
K K+KEA+ L ++M +P+ TY+ L +G R +D NGA Y + + KGI
Sbjct: 290 GLCKMRKMKEARSLLKEMEVNGFMPDGYTYSILFDGLLRCDDGNGAMELYEQATEKGIRI 349
Query: 290 GVDICNELISGLRDEGRLEYVEIIYSEMRVKGLV 189
+ L++GL +G++E E I + GLV
Sbjct: 350 NNYTGSILLNGLCKQGKVEKAEEILKKFTENGLV 383
Score = 102 bits (255), Expect = 1e-19
Identities = 64/214 (29%), Positives = 110/214 (51%), Gaps = 2/214 (0%)
Frame = -2
Query: 791 LISAYAKVGNNLKGLELYEKMKTSGIKPTLITYHLLSSGFIKDGPAV-AEKLFQELLDNN 615
L+S K + +ELYE M+ G P+L++ LL S + + V LF E+ ++
Sbjct: 112 LLSVCCKSKMLREAVELYEFMRRDGKLPSLVSLSLLFSCLVNEKQFVKVVDLFMEIENSG 171
Query: 614 LTPDRVIYNKLISCYAEHKDIHKAFSIHCQMIDQGIQPDCFTYNSLIMCRLKEGKIKEAK 435
D +Y K I + +++ M +G++P+ F YN LI +E +I++A+
Sbjct: 172 FRTDTFMYAKAIQAAVKLQNLKMGMEFLDSMRKRGVRPNVFIYNVLIGGLCREKRIRDAE 231
Query: 434 ELFEDMRNKELVPNADTYNTLVEGHCRVEDFNGAYFWYREMSGKGIVPGVDICNELISGL 255
++F++M N LV + TYNTL++G+C+V + + A+ M K + P + N L+SGL
Sbjct: 232 KMFDEMCNINLVGSIVTYNTLIDGYCKVGELDAAFKMRERMKEKSVAPNIITFNSLLSGL 291
Query: 254 RDEGRLEYVEIIYSEMRVKGLV-DGNTAEELSAG 156
+++ + EM V G + DG T L G
Sbjct: 292 CKMRKMKEARSLLKEMEVNGFMPDGYTYSILFDG 325
>ref|XP_002316451.1| predicted protein [Populus trichocarpa] gi|222865491|gb|EEF02622.1|
predicted protein [Populus trichocarpa]
Length = 707
Score = 336 bits (862), Expect = 5e-90
Identities = 169/301 (56%), Positives = 215/301 (71%)
Frame = -2
Query: 1049 NMVSRGVLPNAQIYNILIDGYCTVGKLNYAFRCLSEMSEKNVLPTIVTYNTLINGLCRKG 870
+MV RGVLPNA IYN+LIDG CTVGKL A R EMS+ + TIVTYN+LI GLC+ G
Sbjct: 407 DMVGRGVLPNANIYNMLIDGSCTVGKLREALRFFDEMSKNGIGATIVTYNSLIKGLCKMG 466
Query: 869 KVVEAEELASQIPSKGLYPDVITYNSLISAYAKVGNNLKGLELYEKMKTSGIKPTLITYH 690
K+ EAEE+ I S G PDVITYNSLIS Y+ GN+ K LELYE MK G+KPT+ T+H
Sbjct: 467 KLKEAEEMFFLITSTGHCPDVITYNSLISGYSNAGNSQKCLELYETMKKLGLKPTINTFH 526
Query: 689 LLSSGFIKDGPAVAEKLFQELLDNNLTPDRVIYNKLISCYAEHKDIHKAFSIHCQMIDQG 510
L SG K+G + E LF E+L NL+PDRV+YN +I CY E + KAFS+ +M+D G
Sbjct: 527 PLISGCSKEGIKLKETLFNEMLQMNLSPDRVVYNAMIHCYQETGHVQKAFSLQKEMVDMG 586
Query: 509 IQPDCFTYNSLIMCRLKEGKIKEAKELFEDMRNKELVPNADTYNTLVEGHCRVEDFNGAY 330
++PD TYNSLI+ LKEGK+ E K+L +DM+ K L+P ADTY+ L++GHC ++DFNGAY
Sbjct: 587 VRPDNKTYNSLILGHLKEGKLSETKDLVDDMKAKGLIPEADTYSLLIQGHCDLKDFNGAY 646
Query: 329 FWYREMSGKGIVPGVDICNELISGLRDEGRLEYVEIIYSEMRVKGLVDGNTAEELSAGAK 150
WYREM G +P V ICNEL +GLR +GRL+ + I SEM G+ + +T E+LS AK
Sbjct: 647 VWYREMLENGFLPNVCICNELSTGLRKDGRLQEAQSICSEMIANGMDNLDTNEDLSDVAK 706
Query: 149 L 147
+
Sbjct: 707 M 707
Score = 153 bits (387), Expect = 6e-35
Identities = 87/288 (30%), Positives = 157/288 (54%), Gaps = 2/288 (0%)
Frame = -2
Query: 1046 MVSRGVLPNAQIYNILIDGYCTVGKLNYAFRCLSEMSEKNVLPTIVTYNTLINGLCRKGK 867
M R ++PN +N LIDGYC G+++ A M ++ V P+I+T+N+L++GLC+ +
Sbjct: 127 MSVRNLVPNRVTFNTLIDGYCKAGEVDVAIGLRERMKKEKVEPSIITFNSLLSGLCKARR 186
Query: 866 VVEAEELASQIPSKGLYPDVITYNSLISAYAKVGNNL-KGLELYEKMKTSGIKPTLITYH 690
+ EA + ++I G PD TY+ + K + L+LY + G+K T
Sbjct: 187 IEEARCMLNEIKCNGFVPDGFTYSIIFDGLLKSDDGAGAALDLYREAIGKGVKIDNYTCS 246
Query: 689 LLSSGFIKDGPAV-AEKLFQELLDNNLTPDRVIYNKLISCYAEHKDIHKAFSIHCQMIDQ 513
+L +G K+G AE++ + L+++ L P VIYN +++ Y + D+ +A QM +
Sbjct: 247 ILLNGLCKEGKVEKAEEVLKSLVEHGLVPGEVIYNTIVNGYCQIGDMDRAILTIEQMESR 306
Query: 512 GIQPDCFTYNSLIMCRLKEGKIKEAKELFEDMRNKELVPNADTYNTLVEGHCRVEDFNGA 333
G++P+C +NS+I + I +A+E + M K + P+ +TYN L++G+ R+ F+
Sbjct: 307 GLRPNCIAFNSVIDKFCEMQMIDKAEEWVKKMVGKGIAPSVETYNILIDGYGRLCVFSRC 366
Query: 332 YFWYREMSGKGIVPGVDICNELISGLRDEGRLEYVEIIYSEMRVKGLV 189
+ EM G P V LI+ L +G++ E++ +M +G++
Sbjct: 367 FQILEEMEENGEKPNVISYGSLINCLCKDGKILEAEMVLRDMVGRGVL 414
Score = 151 bits (381), Expect = 3e-34
Identities = 85/283 (30%), Positives = 151/283 (53%), Gaps = 1/283 (0%)
Frame = -2
Query: 1052 ENMVSRGVLPNAQIYNILIDGYCTVGKLNYAFRCLSEMSEKNVLPTIVTYNTLINGLCRK 873
+++V G++P IYN +++GYC +G ++ A + +M + + P + +N++I+ C
Sbjct: 266 KSLVEHGLVPGEVIYNTIVNGYCQIGDMDRAILTIEQMESRGLRPNCIAFNSVIDKFCEM 325
Query: 872 GKVVEAEELASQIPSKGLYPDVITYNSLISAYAKVGNNLKGLELYEKMKTSGIKPTLITY 693
+ +AEE ++ KG+ P V TYN LI Y ++ + ++ E+M+ +G KP +I+Y
Sbjct: 326 QMIDKAEEWVKKMVGKGIAPSVETYNILIDGYGRLCVFSRCFQILEEMEENGEKPNVISY 385
Query: 692 HLLSSGFIKDGPAV-AEKLFQELLDNNLTPDRVIYNKLISCYAEHKDIHKAFSIHCQMID 516
L + KDG + AE + ++++ + P+ IYN LI + +A +M
Sbjct: 386 GSLINCLCKDGKILEAEMVLRDMVGRGVLPNANIYNMLIDGSCTVGKLREALRFFDEMSK 445
Query: 515 QGIQPDCFTYNSLIMCRLKEGKIKEAKELFEDMRNKELVPNADTYNTLVEGHCRVEDFNG 336
GI TYNSLI K GK+KEA+E+F + + P+ TYN+L+ G+ +
Sbjct: 446 NGIGATIVTYNSLIKGLCKMGKLKEAEEMFFLITSTGHCPDVITYNSLISGYSNAGNSQK 505
Query: 335 AYFWYREMSGKGIVPGVDICNELISGLRDEGRLEYVEIIYSEM 207
Y M G+ P ++ + LISG EG ++ E +++EM
Sbjct: 506 CLELYETMKKLGLKPTINTFHPLISGCSKEG-IKLKETLFNEM 547
Score = 135 bits (341), Expect = 1e-29
Identities = 80/289 (27%), Positives = 144/289 (49%), Gaps = 2/289 (0%)
Frame = -2
Query: 1052 ENMVSRGVLPNAQIYNILIDGYCTVGKLNYAFRCLSEMSEKNVLPTIVTYNTLINGLCRK 873
+ MV G P+ +Y + +G L A M + V+P + YN LI GLC++
Sbjct: 55 KEMVGLGFRPDKLVYGRAMLAAVKLGDLKLAMELFETMKRRKVVPNVFVYNVLIGGLCKE 114
Query: 872 GKVVEAEELASQIPSKGLYPDVITYNSLISAYAKVGNNLKGLELYEKMKTSGIKPTLITY 693
++ +AE+L ++ + L P+ +T+N+LI Y K G + L E+MK ++P++IT+
Sbjct: 115 KRIRDAEKLFGEMSVRNLVPNRVTFNTLIDGYCKAGEVDVAIGLRERMKKEKVEPSIITF 174
Query: 692 HLLSSGFIKDGP-AVAEKLFQELLDNNLTPDRVIYNKLISCYAEHKD-IHKAFSIHCQMI 519
+ L SG K A + E+ N PD Y+ + + D A ++ + I
Sbjct: 175 NSLLSGLCKARRIEEARCMLNEIKCNGFVPDGFTYSIIFDGLLKSDDGAGAALDLYREAI 234
Query: 518 DQGIQPDCFTYNSLIMCRLKEGKIKEAKELFEDMRNKELVPNADTYNTLVEGHCRVEDFN 339
+G++ D +T + L+ KEGK+++A+E+ + + LVP YNT+V G+C++ D +
Sbjct: 235 GKGVKIDNYTCSILLNGLCKEGKVEKAEEVLKSLVEHGLVPGEVIYNTIVNGYCQIGDMD 294
Query: 338 GAYFWYREMSGKGIVPGVDICNELISGLRDEGRLEYVEIIYSEMRVKGL 192
A +M +G+ P N +I + ++ E +M KG+
Sbjct: 295 RAILTIEQMESRGLRPNCIAFNSVIDKFCEMQMIDKAEEWVKKMVGKGI 343
Score = 120 bits (300), Expect = 7e-25
Identities = 75/255 (29%), Positives = 128/255 (50%), Gaps = 2/255 (0%)
Frame = -2
Query: 941 MSEKNVLPTIVTYNTLINGLCRKGKVVEAEELASQIPSKGLYPDVITYNSLISAYAKVGN 762
M ++ LP+ ++ L K +L ++ G PD + Y + A K+G+
Sbjct: 22 MRQEGRLPSFGYVRMIVESLVESKKFDNVLDLFKEMVGLGFRPDKLVYGRAMLAAVKLGD 81
Query: 761 NLKGLELYEKMKTSGIKPTLITYHLLSSGFIKDGP-AVAEKLFQELLDNNLTPDRVIYNK 585
+EL+E MK + P + Y++L G K+ AEKLF E+ NL P+RV +N
Sbjct: 82 LKLAMELFETMKRRKVVPNVFVYNVLIGGLCKEKRIRDAEKLFGEMSVRNLVPNRVTFNT 141
Query: 584 LISCYAEHKDIHKAFSIHCQMIDQGIQPDCFTYNSLIMCRLKEGKIKEAKELFEDMRNKE 405
LI Y + ++ A + +M + ++P T+NSL+ K +I+EA+ + +++
Sbjct: 142 LIDGYCKAGEVDVAIGLRERMKKEKVEPSIITFNSLLSGLCKARRIEEARCMLNEIKCNG 201
Query: 404 LVPNADTYNTLVEGHCRVEDFNGAYF-WYREMSGKGIVPGVDICNELISGLRDEGRLEYV 228
VP+ TY+ + +G + +D GA YRE GKG+ C+ L++GL EG++E
Sbjct: 202 FVPDGFTYSIIFDGLLKSDDGAGAALDLYREAIGKGVKIDNYTCSILLNGLCKEGKVEKA 261
Query: 227 EIIYSEMRVKGLVDG 183
E + + GLV G
Sbjct: 262 EEVLKSLVEHGLVPG 276
Score = 88.2 bits (217), Expect = 3e-15
Identities = 56/193 (29%), Positives = 100/193 (51%), Gaps = 3/193 (1%)
Frame = -2
Query: 746 ELYEKMKTSGIKPTLITYHLLSSGFI--KDGPAVAEKLFQELLDNNLTPDRVIYNKLISC 573
ELY+ M+ G P+ ++ + K V + LF+E++ PD+++Y + +
Sbjct: 17 ELYDFMRQEGRLPSFGYVRMIVESLVESKKFDNVLD-LFKEMVGLGFRPDKLVYGRAMLA 75
Query: 572 YAEHKDIHKAFSIHCQMIDQGIQPDCFTYNSLIMCRLKEGKIKEAKELFEDMRNKELVPN 393
+ D+ A + M + + P+ F YN LI KE +I++A++LF +M + LVPN
Sbjct: 76 AVKLGDLKLAMELFETMKRRKVVPNVFVYNVLIGGLCKEKRIRDAEKLFGEMSVRNLVPN 135
Query: 392 ADTYNTLVEGHCRVEDFNGAYFWYREMSGKGIVPGVDICNELISGLRDEGRLEYVEIIYS 213
T+NTL++G+C+ + + A M + + P + N L+SGL R+E + +
Sbjct: 136 RVTFNTLIDGYCKAGEVDVAIGLRERMKKEKVEPSIITFNSLLSGLCKARRIEEARCMLN 195
Query: 212 EMRVKGLV-DGNT 177
E++ G V DG T
Sbjct: 196 EIKCNGFVPDGFT 208
>ref|XP_003520679.1| PREDICTED: pentatricopeptide repeat-containing protein At5g12100,
mitochondrial-like [Glycine max]
Length = 777
Score = 301 bits (770), Expect = 2e-79
Identities = 149/286 (52%), Positives = 201/286 (70%)
Frame = -2
Query: 1049 NMVSRGVLPNAQIYNILIDGYCTVGKLNYAFRCLSEMSEKNVLPTIVTYNTLINGLCRKG 870
+M+ RGV PNA+IYN+LI+ C++ KL AFR EM + + T+VTYNTLINGL R G
Sbjct: 490 DMIGRGVSPNAEIYNMLIEASCSLSKLKDAFRFFDEMIQSGIDATLVTYNTLINGLGRNG 549
Query: 869 KVVEAEELASQIPSKGLYPDVITYNSLISAYAKVGNNLKGLELYEKMKTSGIKPTLITYH 690
+V +AE+L Q+ KG PDVITYNSLIS YAK N K LELY+KMK GIKPT+ T+H
Sbjct: 550 RVKKAEDLFLQMAGKGCNPDVITYNSLISGYAKSVNTQKCLELYDKMKILGIKPTVGTFH 609
Query: 689 LLSSGFIKDGPAVAEKLFQELLDNNLTPDRVIYNKLISCYAEHKDIHKAFSIHCQMIDQG 510
L K+G +K+FQE+L +L PD+ +YN++I YAE ++ KA S+H QM+DQG
Sbjct: 610 PLIYACRKEGVVTMDKMFQEMLQMDLVPDQFVYNEMIYSYAEDGNVMKAMSLHQQMVDQG 669
Query: 509 IQPDCFTYNSLIMCRLKEGKIKEAKELFEDMRNKELVPNADTYNTLVEGHCRVEDFNGAY 330
+ D TYNSLI+ L++ ++ E K L +DM+ K LVP DTYN L++G C ++DFNGAY
Sbjct: 670 VDCDKVTYNSLILAYLRDRRVSEIKHLVDDMKAKGLVPKVDTYNILIKGLCDLKDFNGAY 729
Query: 329 FWYREMSGKGIVPGVDICNELISGLRDEGRLEYVEIIYSEMRVKGL 192
FWYREM +G++ V +C +LISGLR+EG L +I+ SE+ + GL
Sbjct: 730 FWYREMVERGLLLNVSMCYQLISGLREEGMLREAQIVSSELSIGGL 775
Score = 159 bits (403), Expect = 8e-37
Identities = 98/310 (31%), Positives = 158/310 (50%), Gaps = 15/310 (4%)
Frame = -2
Query: 1046 MVSRGVLPNAQIYNILIDGYCTVGKLNYAFRCLSEMSEKNVLPTIVTYNTLINGLCRKGK 867
+V GV P+ YNIL++ YC G + A +M E+ + P +T+NT+I+ C G+
Sbjct: 351 LVENGVTPSKISYNILVNAYCQEGDVKKAILTTEQMEERGLEPNRITFNTVISKFCETGE 410
Query: 866 VVEAEELASQIPSKGLYPDVITYNSLISAYAKVGNNLKGLELYEKMKTSGIKPTLITYHL 687
V AE ++ KG+ P V TYNSLI+ Y + G+ ++ E ++M +GIKP +I+Y
Sbjct: 411 VDHAETWVRRMVEKGVSPTVETYNSLINGYGQKGHFVRCFEFLDEMDKAGIKPNVISYGS 470
Query: 686 LSSGFIKDGPAV-AEKLFQELLDNNLTPDRVIYNKLISCYAEHKDIHKAFSIHCQMIDQG 510
L + KD + AE + +++ ++P+ IYN LI + AF +MI G
Sbjct: 471 LINCLCKDRKLIDAEIVLADMIGRGVSPNAEIYNMLIEASCSLSKLKDAFRFFDEMIQSG 530
Query: 509 IQPDCFTYNSLIMCRLKEGKIKEAKELFEDMRNKELVPNADTYNTLVEGHCRVEDFNGAY 330
I TYN+LI + G++K+A++LF M K P+ TYN+L+ G+ + +
Sbjct: 531 IDATLVTYNTLINGLGRNGRVKKAEDLFLQMAGKGCNPDVITYNSLISGYAKSVNTQKCL 590
Query: 329 FWYREMSGKGIVPGVDICNELISGLRDEG------------RLEYV--EIIYSEMRVKGL 192
Y +M GI P V + LI R EG +++ V + +Y+EM
Sbjct: 591 ELYDKMKILGIKPTVGTFHPLIYACRKEGVVTMDKMFQEMLQMDLVPDQFVYNEMIYSYA 650
Query: 191 VDGNTAEELS 162
DGN + +S
Sbjct: 651 EDGNVMKAMS 660
Score = 141 bits (356), Expect = 2e-31
Identities = 88/288 (30%), Positives = 150/288 (52%), Gaps = 1/288 (0%)
Frame = -2
Query: 1052 ENMVSRGVLPNAQIYNILIDGYCTVGKLNYAFRCLSEMSEKNVLPTIVTYNTLINGLCRK 873
+ M+ R ++PN YN LIDGYC VG + A M E+NV +VTYN+L+NGLC
Sbjct: 216 DEMIQRNMVPNTVTYNTLIDGYCKVGGIEEALGFKERMKEQNVECNLVTYNSLLNGLCGS 275
Query: 872 GKVVEAEELASQIPSKGLYPDVITYNSLISAYAKVGNNLKGLELYEKMKTSGIKPTLITY 693
G+V +A E+ ++ G P L + N L++ + I+ TY
Sbjct: 276 GRVDDAREVLLEMEGSGFLPG----GFLSFVFDDHSNGAGDDGLFDGKE---IRIDERTY 328
Query: 692 HLLSSGFIKDGPAV-AEKLFQELLDNNLTPDRVIYNKLISCYAEHKDIHKAFSIHCQMID 516
+L +G + G AE++ +L++N +TP ++ YN L++ Y + D+ KA QM +
Sbjct: 329 CILLNGLCRVGRIEKAEEVLAKLVENGVTPSKISYNILVNAYCQEGDVKKAILTTEQMEE 388
Query: 515 QGIQPDCFTYNSLIMCRLKEGKIKEAKELFEDMRNKELVPNADTYNTLVEGHCRVEDFNG 336
+G++P+ T+N++I + G++ A+ M K + P +TYN+L+ G+ + F
Sbjct: 389 RGLEPNRITFNTVISKFCETGEVDHAETWVRRMVEKGVSPTVETYNSLINGYGQKGHFVR 448
Query: 335 AYFWYREMSGKGIVPGVDICNELISGLRDEGRLEYVEIIYSEMRVKGL 192
+ + EM GI P V LI+ L + +L EI+ ++M +G+
Sbjct: 449 CFEFLDEMDKAGIKPNVISYGSLINCLCKDRKLIDAEIVLADMIGRGV 496
Score = 124 bits (312), Expect = 3e-26
Identities = 78/315 (24%), Positives = 139/315 (44%), Gaps = 29/315 (9%)
Frame = -2
Query: 1049 NMVSRGVLPNAQIYNILIDGYCTVGKLNYAFRCLSEMSEKNVLPTIVTYNTLINGLCRKG 870
+++ G P+A Y + + L+ F + M + + P++ YN ++ GLC+
Sbjct: 147 DVIDSGTRPDAVAYGKAVQAAVMLKDLDKGFELMKSMVKDGMGPSVFAYNLVLGGLCKVR 206
Query: 869 KVVEAEELASQIPSKGLYPDVITYNSLISAYAKVGNNLKGLELYEKMKTSGIKPTLITYH 690
++ +A +L ++ + + P+ +TYN+LI Y KVG + L E+MK ++ L+TY+
Sbjct: 207 RIKDARKLFDEMIQRNMVPNTVTYNTLIDGYCKVGGIEEALGFKERMKEQNVECNLVTYN 266
Query: 689 LLSSGFIKDGPA-VAEKLFQELLDNNLTP----------------------------DRV 597
L +G G A ++ E+ + P D
Sbjct: 267 SLLNGLCGSGRVDDAREVLLEMEGSGFLPGGFLSFVFDDHSNGAGDDGLFDGKEIRIDER 326
Query: 596 IYNKLISCYAEHKDIHKAFSIHCQMIDQGIQPDCFTYNSLIMCRLKEGKIKEAKELFEDM 417
Y L++ I KA + ++++ G+ P +YN L+ +EG +K+A E M
Sbjct: 327 TYCILLNGLCRVGRIEKAEEVLAKLVENGVTPSKISYNILVNAYCQEGDVKKAILTTEQM 386
Query: 416 RNKELVPNADTYNTLVEGHCRVEDFNGAYFWYREMSGKGIVPGVDICNELISGLRDEGRL 237
+ L PN T+NT++ C + + A W R M KG+ P V+ N LI+G +G
Sbjct: 387 EERGLEPNRITFNTVISKFCETGEVDHAETWVRRMVEKGVSPTVETYNSLINGYGQKGHF 446
Query: 236 EYVEIIYSEMRVKGL 192
EM G+
Sbjct: 447 VRCFEFLDEMDKAGI 461
Score = 96.7 bits (239), Expect = 9e-18
Identities = 55/190 (28%), Positives = 95/190 (50%), Gaps = 2/190 (1%)
Frame = -2
Query: 746 ELYEKMKTSGIKPTLITYHLLSSGFIKDGPAVAEKL--FQELLDNNLTPDRVIYNKLISC 573
+LY M+ G P+ + + L + D + L F +++D+ PD V Y K +
Sbjct: 108 DLYSTMRKDGFVPSTRSVNRLLRTLV-DSRHFEKTLAVFADVIDSGTRPDAVAYGKAVQA 166
Query: 572 YAEHKDIHKAFSIHCQMIDQGIQPDCFTYNSLIMCRLKEGKIKEAKELFEDMRNKELVPN 393
KD+ K F + M+ G+ P F YN ++ K +IK+A++LF++M + +VPN
Sbjct: 167 AVMLKDLDKGFELMKSMVKDGMGPSVFAYNLVLGGLCKVRRIKDARKLFDEMIQRNMVPN 226
Query: 392 ADTYNTLVEGHCRVEDFNGAYFWYREMSGKGIVPGVDICNELISGLRDEGRLEYVEIIYS 213
TYNTL++G+C+V A + M + + + N L++GL GR++ +
Sbjct: 227 TVTYNTLIDGYCKVGGIEEALGFKERMKEQNVECNLVTYNSLLNGLCGSGRVDDAREVLL 286
Query: 212 EMRVKGLVDG 183
EM G + G
Sbjct: 287 EMEGSGFLPG 296
Score = 73.9 bits (180), Expect = 6e-11
Identities = 63/310 (20%), Positives = 118/310 (38%), Gaps = 29/310 (9%)
Frame = -2
Query: 1034 GVLPNAQIYNILIDGYCTVGKLNYAFRCLSEMSEKNVLPTIVTYNTLINGLCRKGKVVEA 855
G +P+ + N L+ +++ + P V Y + + +
Sbjct: 117 GFVPSTRSVNRLLRTLVDSRHFEKTLAVFADVIDSGTRPDAVAYGKAVQAAVMLKDLDKG 176
Query: 854 EELASQIPSKGLYPDVITYNSLISAYAKVGNNLKGLELYEKMKTSGIKPTLITYHLLSSG 675
EL + G+ P V YN ++ KV +L+++M + P +TY+ L G
Sbjct: 177 FELMKSMVKDGMGPSVFAYNLVLGGLCKVRRIKDARKLFDEMIQRNMVPNTVTYNTLIDG 236
Query: 674 FIKDGPAVAEKLFQE-LLDNNLTPDRVIYNKLISCYAEHKDIHKAFSIHCQMIDQGIQPD 498
+ K G F+E + + N+ + V YN L++ + A + +M G P
Sbjct: 237 YCKVGGIEEALGFKERMKEQNVECNLVTYNSLLNGLCGSGRVDDAREVLLEMEGSGFLPG 296
Query: 497 CF----------------------------TYNSLIMCRLKEGKIKEAKELFEDMRNKEL 402
F TY L+ + G+I++A+E+ + +
Sbjct: 297 GFLSFVFDDHSNGAGDDGLFDGKEIRIDERTYCILLNGLCRVGRIEKAEEVLAKLVENGV 356
Query: 401 VPNADTYNTLVEGHCRVEDFNGAYFWYREMSGKGIVPGVDICNELISGLRDEGRLEYVEI 222
P+ +YN LV +C+ D A +M +G+ P N +IS + G +++ E
Sbjct: 357 TPSKISYNILVNAYCQEGDVKKAILTTEQMEERGLEPNRITFNTVISKFCETGEVDHAET 416
Query: 221 IYSEMRVKGL 192
M KG+
Sbjct: 417 WVRRMVEKGV 426
>ref|NP_196771.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75171712|sp|Q9FMQ1.1|PP376_ARATH RecName:
Full=Pentatricopeptide repeat-containing protein
At5g12100, mitochondrial; Flags: Precursor
gi|9759377|dbj|BAB10028.1| unnamed protein product
[Arabidopsis thaliana] gi|28973713|gb|AAO64173.1| unknown
protein [Arabidopsis thaliana] gi|29824237|gb|AAP04079.1|
unknown protein [Arabidopsis thaliana]
gi|110737169|dbj|BAF00534.1| hypothetical protein
[Arabidopsis thaliana] gi|332004380|gb|AED91763.1|
pentatricopeptide repeat-containing protein [Arabidopsis
thaliana]
Length = 816
Score = 287 bits (734), Expect = 3e-75
Identities = 153/301 (50%), Positives = 202/301 (67%)
Frame = -2
Query: 1049 NMVSRGVLPNAQIYNILIDGYCTVGKLNYAFRCLSEMSEKNVLPTIVTYNTLINGLCRKG 870
+M RGV P +IYN+LIDG C+ GK+ AFR EM +K + +VTYNTLI+GL G
Sbjct: 519 DMEDRGVSPKVRIYNMLIDGCCSKGKIEDAFRFSKEMLKKGIELNLVTYNTLIDGLSMTG 578
Query: 869 KVVEAEELASQIPSKGLYPDVITYNSLISAYAKVGNNLKGLELYEKMKTSGIKPTLITYH 690
K+ EAE+L +I KGL PDV TYNSLIS Y GN + + LYE+MK SGIKPTL TYH
Sbjct: 579 KLSEAEDLLLEISRKGLKPDVFTYNSLISGYGFAGNVQRCIALYEEMKRSGIKPTLKTYH 638
Query: 689 LLSSGFIKDGPAVAEKLFQELLDNNLTPDRVIYNKLISCYAEHKDIHKAFSIHCQMIDQG 510
LL S K+G + E+LF E+ +L PD ++YN ++ CYA H D+ KAF++ QMI++
Sbjct: 639 LLISLCTKEGIELTERLFGEM---SLKPDLLVYNGVLHCYAVHGDMEKAFNLQKQMIEKS 695
Query: 509 IQPDCFTYNSLIMCRLKEGKIKEAKELFEDMRNKELVPNADTYNTLVEGHCRVEDFNGAY 330
I D TYNSLI+ +LK GK+ E + L ++M +E+ P ADTYN +V+GHC V+D+ AY
Sbjct: 696 IGLDKTTYNSLILGQLKVGKLCEVRSLIDEMNAREMEPEADTYNIIVKGHCEVKDYMSAY 755
Query: 329 FWYREMSGKGIVPGVDICNELISGLRDEGRLEYVEIIYSEMRVKGLVDGNTAEELSAGAK 150
WYREM KG + V I NEL+SGL++E R + EI+ SEM + L D E+LSA K
Sbjct: 756 VWYREMQEKGFLLDVCIGNELVSGLKEEWRSKEAEIVISEMNGRMLGDVTVDEDLSATEK 815
Query: 149 L 147
L
Sbjct: 816 L 816
Score = 155 bits (393), Expect = 1e-35
Identities = 87/287 (30%), Positives = 150/287 (52%), Gaps = 1/287 (0%)
Frame = -2
Query: 1049 NMVSRGVLPNAQIYNILIDGYCTVGKLNYAFRCLSEMSEKNVLPTIVTYNTLINGLCRKG 870
N++ P+ +Y I + + + M + P++ YN LI+GLC+
Sbjct: 169 NILESDFRPSKFMYGKAIQAAVKLSDVGKGLELFNRMKHDRIYPSVFIYNVLIDGLCKGK 228
Query: 869 KVVEAEELASQIPSKGLYPDVITYNSLISAYAKVGNNLKGLELYEKMKTSGIKPTLITYH 690
++ +AE+L ++ ++ L P +ITYN+LI Y K GN K ++ E+MK I+P+LIT++
Sbjct: 229 RMNDAEQLFDEMLARRLLPSLITYNTLIDGYCKAGNPEKSFKVRERMKADHIEPSLITFN 288
Query: 689 LLSSGFIKDGPAV-AEKLFQELLDNNLTPDRVIYNKLISCYAEHKDIHKAFSIHCQMIDQ 513
L G K G AE + +E+ D PD ++ L Y+ ++ A ++ +D
Sbjct: 289 TLLKGLFKAGMVEDAENVLKEMKDLGFVPDAFTFSILFDGYSSNEKAEAALGVYETAVDS 348
Query: 512 GIQPDCFTYNSLIMCRLKEGKIKEAKELFEDMRNKELVPNADTYNTLVEGHCRVEDFNGA 333
G++ + +T + L+ KEGKI++A+E+ K LVPN YNT+++G+CR D GA
Sbjct: 349 GVKMNAYTCSILLNALCKEGKIEKAEEILGREMAKGLVPNEVIYNTMIDGYCRKGDLVGA 408
Query: 332 YFWYREMSGKGIVPGVDICNELISGLRDEGRLEYVEIIYSEMRVKGL 192
M +G+ P N LI + G +E E ++M++KG+
Sbjct: 409 RMKIEAMEKQGMKPDHLAYNCLIRRFCELGEMENAEKEVNKMKLKGV 455
Score = 147 bits (371), Expect = 4e-33
Identities = 94/290 (32%), Positives = 145/290 (50%), Gaps = 3/290 (1%)
Frame = -2
Query: 1052 ENMVSRGVLPNAQIYNILIDGYCTVGKLNYAFRCLSEMSEKNVLPTIVTYNTLINGLCRK 873
E V GV NA +IL++ C GK+ A L K ++P V YNT+I+G CRK
Sbjct: 343 ETAVDSGVKMNAYTCSILLNALCKEGKIEKAEEILGREMAKGLVPNEVIYNTMIDGYCRK 402
Query: 872 GKVVEAEELASQIPSKGLYPDVITYNSLISAYAKVGNNLKGLELYEKMKTSGIKPTLITY 693
G +V A + +G+ PD + YN LI + ++G + KMK G+ P++ TY
Sbjct: 403 GDLVGARMKIEAMEKQGMKPDHLAYNCLIRRFCELGEMENAEKEVNKMKLKGVSPSVETY 462
Query: 692 HLLSSGFIKDGPAVAEKLF---QELLDNNLTPDRVIYNKLISCYAEHKDIHKAFSIHCQM 522
++L G+ + +K F +E+ DN P+ V Y LI+C + + +A + M
Sbjct: 463 NILIGGYGRKYEF--DKCFDILKEMEDNGTMPNVVSYGTLINCLCKGSKLLEAQIVKRDM 520
Query: 521 IDQGIQPDCFTYNSLIMCRLKEGKIKEAKELFEDMRNKELVPNADTYNTLVEGHCRVEDF 342
D+G+ P YN LI +GKI++A ++M K + N TYNTL++G
Sbjct: 521 EDRGVSPKVRIYNMLIDGCCSKGKIEDAFRFSKEMLKKGIELNLVTYNTLIDGLSMTGKL 580
Query: 341 NGAYFWYREMSGKGIVPGVDICNELISGLRDEGRLEYVEIIYSEMRVKGL 192
+ A E+S KG+ P V N LISG G ++ +Y EM+ G+
Sbjct: 581 SEAEDLLLEISRKGLKPDVFTYNSLISGYGFAGNVQRCIALYEEMKRSGI 630
Score = 146 bits (369), Expect = 7e-33
Identities = 87/288 (30%), Positives = 146/288 (50%), Gaps = 1/288 (0%)
Frame = -2
Query: 1052 ENMVSRGVLPNAQIYNILIDGYCTVGKLNYAFRCLSEMSEKNVLPTIVTYNTLINGLCRK 873
+ M++R +LP+ YN LIDGYC G +F+ M ++ P+++T+NTL+ GL +
Sbjct: 238 DEMLARRLLPSLITYNTLIDGYCKAGNPEKSFKVRERMKADHIEPSLITFNTLLKGLFKA 297
Query: 872 GKVVEAEELASQIPSKGLYPDVITYNSLISAYAKVGNNLKGLELYEKMKTSGIKPTLITY 693
G V +AE + ++ G PD T++ L Y+ L +YE SG+K T
Sbjct: 298 GMVEDAENVLKEMKDLGFVPDAFTFSILFDGYSSNEKAEAALGVYETAVDSGVKMNAYTC 357
Query: 692 HLLSSGFIKDGP-AVAEKLFQELLDNNLTPDRVIYNKLISCYAEHKDIHKAFSIHCQMID 516
+L + K+G AE++ + L P+ VIYN +I Y D+ A M
Sbjct: 358 SILLNALCKEGKIEKAEEILGREMAKGLVPNEVIYNTMIDGYCRKGDLVGARMKIEAMEK 417
Query: 515 QGIQPDCFTYNSLIMCRLKEGKIKEAKELFEDMRNKELVPNADTYNTLVEGHCRVEDFNG 336
QG++PD YN LI + G+++ A++ M+ K + P+ +TYN L+ G+ R +F+
Sbjct: 418 QGMKPDHLAYNCLIRRFCELGEMENAEKEVNKMKLKGVSPSVETYNILIGGYGRKYEFDK 477
Query: 335 AYFWYREMSGKGIVPGVDICNELISGLRDEGRLEYVEIIYSEMRVKGL 192
+ +EM G +P V LI+ L +L +I+ +M +G+
Sbjct: 478 CFDILKEMEDNGTMPNVVSYGTLINCLCKGSKLLEAQIVKRDMEDRGV 525
Score = 144 bits (362), Expect = 5e-32
Identities = 90/288 (31%), Positives = 142/288 (49%), Gaps = 1/288 (0%)
Frame = -2
Query: 1052 ENMVSRGVLPNAQIYNILIDGYCTVGKLNYAFRCLSEMSEKNVLPTIVTYNTLINGLCRK 873
+ M G +P+A ++IL DGY + K A + V T + L+N LC++
Sbjct: 308 KEMKDLGFVPDAFTFSILFDGYSSNEKAEAALGVYETAVDSGVKMNAYTCSILLNALCKE 367
Query: 872 GKVVEAEELASQIPSKGLYPDVITYNSLISAYAKVGNNLKGLELYEKMKTSGIKPTLITY 693
GK+ +AEE+ + +KGL P+ + YN++I Y + G+ + E M+ G+KP + Y
Sbjct: 368 GKIEKAEEILGREMAKGLVPNEVIYNTMIDGYCRKGDLVGARMKIEAMEKQGMKPDHLAY 427
Query: 692 HLLSSGFIKDGPAV-AEKLFQELLDNNLTPDRVIYNKLISCYAEHKDIHKAFSIHCQMID 516
+ L F + G AEK ++ ++P YN LI Y + K F I +M D
Sbjct: 428 NCLIRRFCELGEMENAEKEVNKMKLKGVSPSVETYNILIGGYGRKYEFDKCFDILKEMED 487
Query: 515 QGIQPDCFTYNSLIMCRLKEGKIKEAKELFEDMRNKELVPNADTYNTLVEGHCRVEDFNG 336
G P+ +Y +LI C K K+ EA+ + DM ++ + P YN L++G C
Sbjct: 488 NGTMPNVVSYGTLINCLCKGSKLLEAQIVKRDMEDRGVSPKVRIYNMLIDGCCSKGKIED 547
Query: 335 AYFWYREMSGKGIVPGVDICNELISGLRDEGRLEYVEIIYSEMRVKGL 192
A+ + +EM KGI + N LI GL G+L E + E+ KGL
Sbjct: 548 AFRFSKEMLKKGIELNLVTYNTLIDGLSMTGKLSEAEDLLLEISRKGL 595
Score = 108 bits (269), Expect = 3e-21
Identities = 66/211 (31%), Positives = 107/211 (50%), Gaps = 2/211 (0%)
Frame = -2
Query: 815 PDVITYNSLISAYAKVGNNLKGLELYEKMKTSGIKPTLITYHLLSSGFIKDGPAV--AEK 642
P Y I A K+ + KGLEL+ +MK I P++ Y++L G K G + AE+
Sbjct: 177 PSKFMYGKAIQAAVKLSDVGKGLELFNRMKHDRIYPSVFIYNVLIDGLCK-GKRMNDAEQ 235
Query: 641 LFQELLDNNLTPDRVIYNKLISCYAEHKDIHKAFSIHCQMIDQGIQPDCFTYNSLIMCRL 462
LF E+L L P + YN LI Y + + K+F + +M I+P T+N+L+
Sbjct: 236 LFDEMLARRLLPSLITYNTLIDGYCKAGNPEKSFKVRERMKADHIEPSLITFNTLLKGLF 295
Query: 461 KEGKIKEAKELFEDMRNKELVPNADTYNTLVEGHCRVEDFNGAYFWYREMSGKGIVPGVD 282
K G +++A+ + ++M++ VP+A T++ L +G+ E A Y G+
Sbjct: 296 KAGMVEDAENVLKEMKDLGFVPDAFTFSILFDGYSSNEKAEAALGVYETAVDSGVKMNAY 355
Query: 281 ICNELISGLRDEGRLEYVEIIYSEMRVKGLV 189
C+ L++ L EG++E E I KGLV
Sbjct: 356 TCSILLNALCKEGKIEKAEEILGREMAKGLV 386
Score = 86.3 bits (212), Expect = 1e-14
Identities = 52/187 (27%), Positives = 92/187 (49%), Gaps = 1/187 (0%)
Frame = -2
Query: 746 ELYEKMKTSGIKPTLITYHLLSSGFIKDGP-AVAEKLFQELLDNNLTPDRVIYNKLISCY 570
+L+ ++ GI P+ + LL +K V +F +L+++ P + +Y K I
Sbjct: 130 DLFFALRNEGIYPSSDSLTLLLDHLVKTKQFRVTINVFLNILESDFRPSKFMYGKAIQAA 189
Query: 569 AEHKDIHKAFSIHCQMIDQGIQPDCFTYNSLIMCRLKEGKIKEAKELFEDMRNKELVPNA 390
+ D+ K + +M I P F YN LI K ++ +A++LF++M + L+P+
Sbjct: 190 VKLSDVGKGLELFNRMKHDRIYPSVFIYNVLIDGLCKGKRMNDAEQLFDEMLARRLLPSL 249
Query: 389 DTYNTLVEGHCRVEDFNGAYFWYREMSGKGIVPGVDICNELISGLRDEGRLEYVEIIYSE 210
TYNTL++G+C+ + ++ M I P + N L+ GL G +E E + E
Sbjct: 250 ITYNTLIDGYCKAGNPEKSFKVRERMKADHIEPSLITFNTLLKGLFKAGMVEDAENVLKE 309
Query: 209 MRVKGLV 189
M+ G V
Sbjct: 310 MKDLGFV 316
Score = 57.8 bits (138), Expect = 4e-06
Identities = 36/155 (23%), Positives = 67/155 (43%), Gaps = 2/155 (1%)
Frame = -2
Query: 692 HLLSSGFIKDGPAVAEK--LFQELLDNNLTPDRVIYNKLISCYAEHKDIHKAFSIHCQMI 519
+LL S + + ++E LF L + + P L+ + K ++ ++
Sbjct: 112 YLLLSVLLNESKMISEAADLFFALRNEGIYPSSDSLTLLLDHLVKTKQFRVTINVFLNIL 171
Query: 518 DQGIQPDCFTYNSLIMCRLKEGKIKEAKELFEDMRNKELVPNADTYNTLVEGHCRVEDFN 339
+ +P F Y I +K + + ELF M++ + P+ YN L++G C+ + N
Sbjct: 172 ESDFRPSKFMYGKAIQAAVKLSDVGKGLELFNRMKHDRIYPSVFIYNVLIDGLCKGKRMN 231
Query: 338 GAYFWYREMSGKGIVPGVDICNELISGLRDEGRLE 234
A + EM + ++P + N LI G G E
Sbjct: 232 DAEQLFDEMLARRLLPSLITYNTLIDGYCKAGNPE 266