BLASTX nr result

ID: Angelica23_contig00017319 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica23_contig00017319
         (1703 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002281594.1| PREDICTED: cleavage and polyadenylation spec...   402   e-109
ref|XP_002523201.1| conserved hypothetical protein [Ricinus comm...   383   e-104
ref|XP_003546247.1| PREDICTED: cleavage and polyadenylation spec...   375   e-101
ref|XP_003534764.1| PREDICTED: cleavage and polyadenylation spec...   365   3e-98
emb|CBI30994.3| unnamed protein product [Vitis vinifera]              359   1e-96

>ref|XP_002281594.1| PREDICTED: cleavage and polyadenylation specificity factor
            CPSF30-like [Vitis vinifera]
          Length = 673

 Score =  402 bits (1032), Expect = e-109
 Identities = 235/440 (53%), Positives = 257/440 (58%), Gaps = 10/440 (2%)
 Frame = -3

Query: 1644 NLPNGQQSQASRSAIPLPQGISRYFVVKSCNRENFELSVQQGVWATQRSNEAKLNEAFDS 1465
            NLPNG  +QA+++A PLPQGISRYF+VKSCNREN ELSVQQGVWATQRSNEAKLNEAFDS
Sbjct: 226  NLPNGLPNQANKTASPLPQGISRYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDS 285

Query: 1464 VENVILIFSVNRTRHFQGCAKMTSKIGGSAVGGNWKYAHGTAHYGRNFSVKWLKLCELSF 1285
            VENVILIFSVNRTRHFQGCAKMTSKIGG   GGNWKYAHGTAHYGRNFSVKWLKLCELSF
Sbjct: 286  VENVILIFSVNRTRHFQGCAKMTSKIGGFVGGGNWKYAHGTAHYGRNFSVKWLKLCELSF 345

Query: 1284 HKTRHLRNPYNENLPVKISRDCQELEPSIGEQLASLLYLEPDSELMEISLXXXXXXXXXX 1105
            HKTRHLRNPYNENLPVKISRDCQELEPSIGEQLASLLYLEPDSELM ISL          
Sbjct: 346  HKTRHLRNPYNENLPVKISRDCQELEPSIGEQLASLLYLEPDSELMAISLAAESKREEEK 405

Query: 1104 XKGVDPEDRTENQDIVPFXXXXXXXXXXXXXXDQSFSQGFXXXXXXXXXXXXXXXXXXXX 925
             KGV+P++  EN DIVPF              ++SF Q                      
Sbjct: 406  AKGVNPDNGGENPDIVPFEDNEEEEEEESEEEEESFGQALGPAAQGRGRGRGIMWPPHMP 465

Query: 924  XXXXXXXXXXXXXXXXXXXXPDGFSYG---PDGFPVPDMFNMXXXXXXXXXXXFSGDFAG 754
                                 DGFSY    PDGF +PD+F +           FSGDF G
Sbjct: 466  LARGARPIPSMRGFPPVMMGADGFSYSAVPPDGFAMPDIFGVGPRAFPPYGPRFSGDFTG 525

Query: 753  P-GGMMFQ-XXXXXXXXXXXXXXXXXXXXRAPFM-----XXXXXXXXXXXGDMHPMYPQS 595
            P  GMMF                      RAPFM                  M PM+P  
Sbjct: 526  PASGMMFPGRGQPGAVFPASGYGMMMGPGRAPFMGGMGVPAAAPTRAGRPVGMPPMFPPP 585

Query: 594  QLQPSQTSNRVKRDQKATSNDRSDRYSTXXXXXXXXXXXXXXXXXXXXXXXQKMNPHQED 415
               P+  +NR KRDQ+   NDR+DRYS                        Q +   Q+D
Sbjct: 586  P-PPNSQNNRTKRDQRTPVNDRNDRYS---GGSDQGRGQDMAGPDDETQYLQGLKSQQDD 641

Query: 414  QVGAGNSFKNNESGSEDEAP 355
            Q G GNSF+N+ES SEDEAP
Sbjct: 642  QFGGGNSFRNDESESEDEAP 661


>ref|XP_002523201.1| conserved hypothetical protein [Ricinus communis]
            gi|223537608|gb|EEF39232.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 702

 Score =  383 bits (984), Expect = e-104
 Identities = 234/462 (50%), Positives = 255/462 (55%), Gaps = 7/462 (1%)
 Frame = -3

Query: 1644 NLPNGQQSQASRSAIPLPQGISRYFVVKSCNRENFELSVQQGVWATQRSNEAKLNEAFDS 1465
            NLPNGQ +QA+R+AIPLPQGISRYF+VKSCNREN ELSVQQGVWATQRSNEAKLNEAFDS
Sbjct: 248  NLPNGQPNQANRTAIPLPQGISRYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDS 307

Query: 1464 VENVILIFSVNRTRHFQGCAKMTSKIGGSAVGGNWKYAHGTAHYGRNFSVKWLKLCELSF 1285
             ENVILIFSVNRTRHFQGCAKMTSKIG S  GGNWKYAHGTAHYGRNFSVKWLKLCELSF
Sbjct: 308  AENVILIFSVNRTRHFQGCAKMTSKIGASVGGGNWKYAHGTAHYGRNFSVKWLKLCELSF 367

Query: 1284 HKTRHLRNPYNENLPVKISRDCQELEPSIGEQLASLLYLEPDSELMEISLXXXXXXXXXX 1105
            HKTRHLRNPYNENLPVKISRDCQELEPS+G QLA LLY EPDSELM ISL          
Sbjct: 368  HKTRHLRNPYNENLPVKISRDCQELEPSVGGQLACLLYDEPDSELMAISLAAEAKREEEK 427

Query: 1104 XKGVDPEDRTENQDIVPFXXXXXXXXXXXXXXDQSFSQGFXXXXXXXXXXXXXXXXXXXX 925
             KGV+PE+  +N DIVPF              ++SF Q                      
Sbjct: 428  AKGVNPENGGDNPDIVPFEDNEEEEEEESEEEEESFGQAL-GAPGQGRGRGRGIIWPHMP 486

Query: 924  XXXXXXXXXXXXXXXXXXXXPDGFSYG---PDGFPVPDMFNMXXXXXXXXXXXFSGDFAG 754
                                 D FSYG   PDGF +PD+F +           FSGDF G
Sbjct: 487  LARGARPIPGMRGFPPMMMGADSFSYGPVTPDGFGMPDLFGVAPRGFTPYAPRFSGDFTG 546

Query: 753  -PGGMMF--QXXXXXXXXXXXXXXXXXXXXRAPFMXXXXXXXXXXXGDMHP-MYPQSQLQ 586
               GMMF  +                    RAPFM               P   P   L 
Sbjct: 547  AASGMMFPGRPPQPGGVFPNGGFGMMMGPGRAPFMGGMGPNSTNPLRGNWPGGMPFPPLP 606

Query: 585  PSQTSNRVKRDQKATSNDRSDRYSTXXXXXXXXXXXXXXXXXXXXXXXQKMNPHQEDQVG 406
                   VKRDQ+ T+N   DRYST                         +    EDQ G
Sbjct: 607  TPSPQRPVKRDQRMTAN---DRYSTGSDQGRNTAGEPDDEARYQQEG---LKASHEDQFG 660

Query: 405  AGNSFKNNESGSEDEAPXXXXXXXXXXXXXXXXRDATAGSEN 280
            AGNSF+N+ES SEDEAP                 DAT GS++
Sbjct: 661  AGNSFRNDESESEDEAPRRSRHGEGKKKRRGSEGDATPGSDH 702


>ref|XP_003546247.1| PREDICTED: cleavage and polyadenylation specificity factor
            CPSF30-like [Glycine max]
          Length = 691

 Score =  375 bits (963), Expect = e-101
 Identities = 221/443 (49%), Positives = 252/443 (56%), Gaps = 13/443 (2%)
 Frame = -3

Query: 1644 NLPNGQQSQASRSAIPLPQGISRYFVVKSCNRENFELSVQQGVWATQRSNEAKLNEAFDS 1465
            N+ NGQ +QA+R+A PLPQGISRYF+VKSCNREN ELSVQQGVWATQRSNE+KLNEAFDS
Sbjct: 238  NVANGQPNQANRTATPLPQGISRYFIVKSCNRENLELSVQQGVWATQRSNESKLNEAFDS 297

Query: 1464 VENVILIFSVNRTRHFQGCAKMTSKIGGSAVGGNWKYAHGTAHYGRNFSVKWLKLCELSF 1285
            VENVIL+FSVNRTRHFQGCAKMTS+IGGS  GGNWKYAHGTAHYGRNFSVKWLKLCELSF
Sbjct: 298  VENVILVFSVNRTRHFQGCAKMTSRIGGSVAGGNWKYAHGTAHYGRNFSVKWLKLCELSF 357

Query: 1284 HKTRHLRNPYNENLPVKISRDCQELEPSIGEQLASLLYLEPDSELMEISLXXXXXXXXXX 1105
            HKTRHLRNPYNENLPVKISRDCQELEPSIGEQLASLLYLEPDSELM IS+          
Sbjct: 358  HKTRHLRNPYNENLPVKISRDCQELEPSIGEQLASLLYLEPDSELMAISVAAESKREEEK 417

Query: 1104 XKGVDPEDRTENQDIVPFXXXXXXXXXXXXXXDQSFSQGFXXXXXXXXXXXXXXXXXXXX 925
             KGV+P++  EN DIVPF              ++SFS G                     
Sbjct: 418  AKGVNPDNGGENPDIVPFEDNEEEEEEESDEEEESFSHG-VGPAGQGRGRGRGMMWPPHM 476

Query: 924  XXXXXXXXXXXXXXXXXXXXPDGFSY------GPDGFPVPDMFNMXXXXXXXXXXXFSGD 763
                                 DG SY      GPDGF +PD+F +           FSGD
Sbjct: 477  PLGRGARPMPGMQGFNPVMMGDGLSYGPVGPVGPDGFGMPDLFGVGPRGFAPYGPRFSGD 536

Query: 762  FAG-PGGMMFQ-XXXXXXXXXXXXXXXXXXXXRAPFM-----XXXXXXXXXXXGDMHPMY 604
            F G P  MMF+                     R PFM                 +M PM+
Sbjct: 537  FGGPPAAMMFRGRPSQPGMFPSGGFGMMMNPGRGPFMGGMGVGGANPPRGGRPVNMPPMF 596

Query: 603  PQSQLQPSQTSNRVKRDQKATSNDRSDRYSTXXXXXXXXXXXXXXXXXXXXXXXQKMNPH 424
            P     P   +   KRDQ+    DR+DR+ +                       Q+    
Sbjct: 597  PPPPPLPQNANRAAKRDQRTA--DRNDRFGSGSEQGKSQDMLSQSGGPDDDAQYQQGYKG 654

Query: 423  QEDQVGAGNSFKNNESGSEDEAP 355
             +D   A N+F+N++S SEDEAP
Sbjct: 655  NQDDHPAVNNFRNDDSESEDEAP 677


>ref|XP_003534764.1| PREDICTED: cleavage and polyadenylation specificity factor
            CPSF30-like [Glycine max]
          Length = 681

 Score =  365 bits (936), Expect = 3e-98
 Identities = 209/388 (53%), Positives = 232/388 (59%), Gaps = 10/388 (2%)
 Frame = -3

Query: 1644 NLPNGQQSQASRSAIPLPQGISRYFVVKSCNRENFELSVQQGVWATQRSNEAKLNEAFDS 1465
            N+ NGQ +QA+R+A PLPQGISRYF+VKSCNREN ELSVQQGVWATQRSNE+KLNEAFDS
Sbjct: 238  NVANGQPNQANRTATPLPQGISRYFIVKSCNRENLELSVQQGVWATQRSNESKLNEAFDS 297

Query: 1464 VENVILIFSVNRTRHFQGCAKMTSKIGGSAVGGNWKYAHGTAHYGRNFSVKWLKLCELSF 1285
            VENVILIFSVNRTRHFQGCAKMTSKIGGS  GGNWKYAHGTAHYGRNFSVKWLKLCELSF
Sbjct: 298  VENVILIFSVNRTRHFQGCAKMTSKIGGSVAGGNWKYAHGTAHYGRNFSVKWLKLCELSF 357

Query: 1284 HKTRHLRNPYNENLPVKISRDCQELEPSIGEQLASLLYLEPDSELMEISLXXXXXXXXXX 1105
            HKTRHLRNPYNENLPVKISRDCQELEPSIGEQLASLLYLEPDSELM IS+          
Sbjct: 358  HKTRHLRNPYNENLPVKISRDCQELEPSIGEQLASLLYLEPDSELMAISVAAESKREEEK 417

Query: 1104 XKGVDPEDRTENQDIVPFXXXXXXXXXXXXXXDQSFSQGFXXXXXXXXXXXXXXXXXXXX 925
             KGV+P++  EN DIVPF              ++SF  G                     
Sbjct: 418  AKGVNPDNGGENPDIVPFEDNEEEEEEESDEEEESFGHG-VGPAGQGRGRGRGMMWPPHM 476

Query: 924  XXXXXXXXXXXXXXXXXXXXPDGFSY---GPDGFPVPDMFNMXXXXXXXXXXXFSGDFAG 754
                                 DG SY   GPDGF +PD+F +           FSGDF G
Sbjct: 477  PLGRGARPMPGMQGFNPVMMGDGLSYGPVGPDGFGMPDLFGVGPRGFAPYGPRFSGDFGG 536

Query: 753  -PGGMMFQ-XXXXXXXXXXXXXXXXXXXXRAPFM-----XXXXXXXXXXXGDMHPMYPQS 595
             P  MMF+                     R PFM                 +M PM+P  
Sbjct: 537  PPAAMMFRGRPSQPGMFPGGGFGMMLNPGRGPFMGGIGVGGANPPRGGRPVNMPPMFPPP 596

Query: 594  QLQPSQTSNRVKRDQKATSNDRSDRYST 511
               P   +   KRDQ+    DR+DR+ +
Sbjct: 597  PPLPQNANRAAKRDQRTA--DRNDRFGS 622


>emb|CBI30994.3| unnamed protein product [Vitis vinifera]
          Length = 485

 Score =  359 bits (922), Expect = 1e-96
 Identities = 191/305 (62%), Positives = 204/305 (66%), Gaps = 3/305 (0%)
 Frame = -3

Query: 1644 NLPNGQQSQASRSAIPLPQGISRYFVVKSCNRENFELSVQQGVWATQRSNEAKLNEAFDS 1465
            NLPNG  +QA+++A PLPQGISRYF+VKSCNREN ELSVQQGVWATQRSNEAKLNEAFDS
Sbjct: 153  NLPNGLPNQANKTASPLPQGISRYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDS 212

Query: 1464 VENVILIFSVNRTRHFQGCAKMTSKIGGSAVGGNWKYAHGTAHYGRNFSVKWLKLCELSF 1285
            VENVILIFSVNRTRHFQGCAKMTSKIGG   GGNWKYAHGTAHYGRNFSVKWLKLCELSF
Sbjct: 213  VENVILIFSVNRTRHFQGCAKMTSKIGGFVGGGNWKYAHGTAHYGRNFSVKWLKLCELSF 272

Query: 1284 HKTRHLRNPYNENLPVKISRDCQELEPSIGEQLASLLYLEPDSELMEISLXXXXXXXXXX 1105
            HKTRHLRNPYNENLPVKISRDCQELEPSIGEQLASLLYLEPDSELM ISL          
Sbjct: 273  HKTRHLRNPYNENLPVKISRDCQELEPSIGEQLASLLYLEPDSELMAISLAAESKREEEK 332

Query: 1104 XKGVDPEDRTENQDIVPFXXXXXXXXXXXXXXDQSFSQGFXXXXXXXXXXXXXXXXXXXX 925
             KGV+P++  EN DIVPF              ++SF Q                      
Sbjct: 333  AKGVNPDNGGENPDIVPFEDNEEEEEEESEEEEESFGQALGPAAQGRGRGRGIMWPPHMP 392

Query: 924  XXXXXXXXXXXXXXXXXXXXPDGFSYG---PDGFPVPDMFNMXXXXXXXXXXXFSGDFAG 754
                                 DGFSY    PDGF +PD+F +           FSGDF G
Sbjct: 393  LARGARPIPSMRGFPPVMMGADGFSYSAVPPDGFAMPDIFGVGPRAFPPYGPRFSGDFTG 452

Query: 753  PGGMM 739
            P   M
Sbjct: 453  PASGM 457


Top