BLASTX nr result

ID: Angelica23_contig00017278 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica23_contig00017278
         (661 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002529848.1| DNA repair and recombination protein RAD26, ...   253   2e-65
ref|XP_002272543.1| PREDICTED: DNA excision repair protein ERCC-...   243   2e-62
ref|XP_002307656.1| chromatin remodeling complex subunit [Populu...   243   2e-62
emb|CAN67815.1| hypothetical protein VITISV_002502 [Vitis vinifera]   243   2e-62
ref|XP_003541362.1| PREDICTED: DNA repair and recombination prot...   238   8e-61

>ref|XP_002529848.1| DNA repair and recombination protein RAD26, putative [Ricinus
            communis] gi|223530676|gb|EEF32549.1| DNA repair and
            recombination protein RAD26, putative [Ricinus communis]
          Length = 1230

 Score =  253 bits (646), Expect = 2e-65
 Identities = 135/204 (66%), Positives = 157/204 (76%), Gaps = 1/204 (0%)
 Frame = -2

Query: 660  SQVAQRAAEALRQSRVIRSRESIAVPTWTGKSGAAGAPSSVRQKFGSTVNTQLVGSSRPS 481
            SQVAQRAAEALRQSR++RS +S++VPTWTGKSG AGAPSSVR+KFGSTVN+QL+ SS  S
Sbjct: 1030 SQVAQRAAEALRQSRMLRSHDSVSVPTWTGKSGTAGAPSSVRRKFGSTVNSQLIRSSDVS 1089

Query: 480  EGLPNSEGRXXXXXXXXXXXXXXXXSELLARIRGNQERAVGDGIEQQFGLASSSTGRANF 301
                N                    +ELLARIRGNQERAVG G+EQQFGLAS+S  RA  
Sbjct: 1090 S---NKTSSMNGMGVGASAGKALSSAELLARIRGNQERAVGAGLEQQFGLASTSANRAGS 1146

Query: 300  ANNSTVK-SSNLSGVQPEVLIRQICTFLQQRGGRTVSASIVQHFKDRIPSKDLPLFKNLL 124
             NN   + S NLSGVQPE+LIR+ICTF+QQRGG T SA+IV HFKDRI  KD+PLFKNLL
Sbjct: 1147 ENNGVSRPSKNLSGVQPEILIRKICTFIQQRGGITDSATIVNHFKDRILEKDMPLFKNLL 1206

Query: 123  KEIATLEKNPSGSSWVLKPEYQEE 52
            KEIATLEK+P+G  WVLKPEY+++
Sbjct: 1207 KEIATLEKDPNGKVWVLKPEYRQQ 1230


>ref|XP_002272543.1| PREDICTED: DNA excision repair protein ERCC-6-like [Vitis vinifera]
          Length = 1227

 Score =  243 bits (621), Expect = 2e-62
 Identities = 129/203 (63%), Positives = 159/203 (78%), Gaps = 2/203 (0%)
 Frame = -2

Query: 660  SQVAQRAAEALRQSRVIRSRESIAVPTWTGKSGAAGAPSSVRQKFGSTVNTQLVGSSRPS 481
            S+VA+RA+EALRQS+++RSRESI+VPTWTG+SGAAGAPSSV +KFGSTV++QL+  S+ S
Sbjct: 1024 SRVAKRASEALRQSQMLRSRESISVPTWTGRSGAAGAPSSVSRKFGSTVSSQLINRSKSS 1083

Query: 480  E-GLPNSEGRXXXXXXXXXXXXXXXXSELLARIRGNQERAVGDGIEQQFGLASSSTGRAN 304
            E    N   +                +ELLARIRGNQERA  DG+E Q G +S++  R+ 
Sbjct: 1084 EESSSNGMSKPNGIAAGASAGKALSSAELLARIRGNQERATDDGLEHQLGSSSANRARST 1143

Query: 303  FANNSTVKSS-NLSGVQPEVLIRQICTFLQQRGGRTVSASIVQHFKDRIPSKDLPLFKNL 127
             +  S+ +S+ NLS VQPEVLIR+ICTF+QQ+GG T S SIVQHFKDRIPSKDLPLFKNL
Sbjct: 1144 DSGPSSSRSTHNLSSVQPEVLIRKICTFIQQKGGSTNSTSIVQHFKDRIPSKDLPLFKNL 1203

Query: 126  LKEIATLEKNPSGSSWVLKPEYQ 58
            LKEIATLEK+P+GSSWVLKPEY+
Sbjct: 1204 LKEIATLEKDPNGSSWVLKPEYR 1226


>ref|XP_002307656.1| chromatin remodeling complex subunit [Populus trichocarpa]
            gi|222857105|gb|EEE94652.1| chromatin remodeling complex
            subunit [Populus trichocarpa]
          Length = 1206

 Score =  243 bits (621), Expect = 2e-62
 Identities = 132/202 (65%), Positives = 154/202 (76%), Gaps = 1/202 (0%)
 Frame = -2

Query: 660  SQVAQRAAEALRQSRVIRSRESIAVPTWTGKSGAAGAPSSVRQKFGSTVNTQLVGSSRPS 481
            SQVAQRAAEALRQSR++RSR+SI+VPTWTGKSG AGAPSSVRQKFGSTVN+QL+ SS  S
Sbjct: 1008 SQVAQRAAEALRQSRMLRSRDSISVPTWTGKSGTAGAPSSVRQKFGSTVNSQLIKSSDSS 1067

Query: 480  EGLPNSEGRXXXXXXXXXXXXXXXXSELLARIRGNQERAVGDGIEQQFGLASSSTGRANF 301
                +++                  +ELLARIRGNQERAVG G++QQFG ASSS   A  
Sbjct: 1068 S---SNKSNLKGIAAGTSAGKALSSAELLARIRGNQERAVGAGLDQQFGFASSSGTSAMS 1124

Query: 300  ANNSTVKS-SNLSGVQPEVLIRQICTFLQQRGGRTVSASIVQHFKDRIPSKDLPLFKNLL 124
             N+   K    LS VQPE+LIRQICTF+Q+RGG + S+SIVQHFKDRIPSKDLPLFKNLL
Sbjct: 1125 ENSGASKPPQTLSSVQPEILIRQICTFIQRRGGSSDSSSIVQHFKDRIPSKDLPLFKNLL 1184

Query: 123  KEIATLEKNPSGSSWVLKPEYQ 58
            KEIA+L ++ +G  WVLKPEYQ
Sbjct: 1185 KEIASLREDANGKQWVLKPEYQ 1206


>emb|CAN67815.1| hypothetical protein VITISV_002502 [Vitis vinifera]
          Length = 1249

 Score =  243 bits (621), Expect = 2e-62
 Identities = 129/203 (63%), Positives = 159/203 (78%), Gaps = 2/203 (0%)
 Frame = -2

Query: 660  SQVAQRAAEALRQSRVIRSRESIAVPTWTGKSGAAGAPSSVRQKFGSTVNTQLVGSSRPS 481
            S+VA+RA+EALRQS+++RSRESI+VPTWTG+SGAAGAPSSV +KFGSTV++QL+  S+ S
Sbjct: 1046 SRVAKRASEALRQSQMLRSRESISVPTWTGRSGAAGAPSSVSRKFGSTVSSQLINRSKSS 1105

Query: 480  E-GLPNSEGRXXXXXXXXXXXXXXXXSELLARIRGNQERAVGDGIEQQFGLASSSTGRAN 304
            E    N   +                +ELLARIRGNQERA  DG+E Q G +S++  R+ 
Sbjct: 1106 EESSSNGMSKPNGIAAGASAGKALSSAELLARIRGNQERATDDGLEHQLGSSSANRARST 1165

Query: 303  FANNSTVKSS-NLSGVQPEVLIRQICTFLQQRGGRTVSASIVQHFKDRIPSKDLPLFKNL 127
             +  S+ +S+ NLS VQPEVLIR+ICTF+QQ+GG T S SIVQHFKDRIPSKDLPLFKNL
Sbjct: 1166 DSGPSSSRSTHNLSSVQPEVLIRKICTFIQQKGGSTNSTSIVQHFKDRIPSKDLPLFKNL 1225

Query: 126  LKEIATLEKNPSGSSWVLKPEYQ 58
            LKEIATLEK+P+GSSWVLKPEY+
Sbjct: 1226 LKEIATLEKDPNGSSWVLKPEYR 1248


>ref|XP_003541362.1| PREDICTED: DNA repair and recombination protein RAD26-like [Glycine
            max]
          Length = 1210

 Score =  238 bits (607), Expect = 8e-61
 Identities = 126/203 (62%), Positives = 155/203 (76%), Gaps = 2/203 (0%)
 Frame = -2

Query: 660  SQVAQRAAEALRQSRVIRSRESIAVPTWTGKSGAAGAPSSVRQKFGSTVNTQLVGSSRPS 481
            SQVAQRAAEALRQSR++RS +S++VPTWTG+SG AGAPSSV++KFGSTVN QLV +S+ S
Sbjct: 1007 SQVAQRAAEALRQSRMLRSHDSVSVPTWTGRSGTAGAPSSVKRKFGSTVNPQLVNNSKAS 1066

Query: 480  EGLPNSEGRXXXXXXXXXXXXXXXXS--ELLARIRGNQERAVGDGIEQQFGLASSSTGRA 307
            + LPN                    S  ELLA+IRGNQE+A+G G+E QFG++SSST + 
Sbjct: 1067 DELPNKGTNKINGFAAAGASAGKALSSAELLAQIRGNQEKAIGAGLEHQFGVSSSSTNQP 1126

Query: 306  NFANNSTVKSSNLSGVQPEVLIRQICTFLQQRGGRTVSASIVQHFKDRIPSKDLPLFKNL 127
               +  + +++  S VQPEVLIR+ICTF+QQRGG + SASIVQ+FKDRIPSKDL LFKNL
Sbjct: 1127 RSGDVRSSRATENSSVQPEVLIRKICTFIQQRGGSSDSASIVQYFKDRIPSKDLALFKNL 1186

Query: 126  LKEIATLEKNPSGSSWVLKPEYQ 58
            LKEIATL K  +GS WVLKP+YQ
Sbjct: 1187 LKEIATLHKGSNGSYWVLKPDYQ 1209


Top