BLASTX nr result

ID: Angelica23_contig00017240 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica23_contig00017240
         (1317 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002280451.2| PREDICTED: uncharacterized protein LOC100266...   376   e-102
ref|XP_003597796.1| DNA repair protein XRCC1 [Medicago truncatul...   352   9e-95
ref|XP_004135823.1| PREDICTED: uncharacterized protein LOC101221...   351   3e-94
emb|CBI36187.3| unnamed protein product [Vitis vinifera]              350   4e-94
ref|XP_002299631.1| predicted protein [Populus trichocarpa] gi|2...   350   5e-94

>ref|XP_002280451.2| PREDICTED: uncharacterized protein LOC100266851 [Vitis vinifera]
          Length = 389

 Score =  376 bits (965), Expect = e-102
 Identities = 205/394 (52%), Positives = 255/394 (64%), Gaps = 32/394 (8%)
 Frame = +1

Query: 88   MSDLSASPGK------KRNLPSWMG-------SRQKQKNDHGGSQKQGRGGS------EG 210
            MSD  +S G       KR+LPSWM        +R K+  D GG +++  G         G
Sbjct: 1    MSDSKSSRGDGANKTVKRSLPSWMSDIENGSKARGKRSGDGGGQEERKEGEKPEQAKGNG 60

Query: 211  GSKEN---------DNFSKILEGVVFVLSGLVNPERGVLRSRAMEMGAEFQADWNSNCTL 363
            G   N          NFS +LEGVVFVLSG VNPER  LRS+A+EMGAE+Q DWNSNCTL
Sbjct: 61   GKSNNRPGASNLSTSNFSNLLEGVVFVLSGFVNPERSTLRSQALEMGAEYQPDWNSNCTL 120

Query: 364  LVCAFPNTPKFRQVESDCGTIVSKEWISECYNKRKLVDIDTYLLHAGKPWRKQS--KASK 537
            LVCAFPNTPKFRQVE+DCGTIVSKEW+SECYN++KL DI+ YL+HAGKPWR+ +    +K
Sbjct: 121  LVCAFPNTPKFRQVEADCGTIVSKEWLSECYNQKKLADIEIYLMHAGKPWRRSNVPHQAK 180

Query: 538  TTQDEEPSTSKKSQKQVEKAAHSKPNPKASLKHGVAFGTEQEYFVPSKVKKWAEDDFSKT 717
               DEE S    S+ QVE+   SK     S          ++ F PS+VKKWA DD  KT
Sbjct: 181  NVADEEASPPSNSKMQVERGLRSKLTASKS-----GSNPAKDLFSPSEVKKWAIDDLHKT 235

Query: 718  ISWLESQDEKPDPSDIKKIAAEGILTCLQDAIDSLKQDQEIQHISEQWNFVPRVVEELAK 897
            ISWL+SQ+EKP+PS+IKKIAA GILTCLQDAIDSL Q Q+I  ++++WNF+PRVVEEL K
Sbjct: 236  ISWLDSQEEKPEPSEIKKIAAGGILTCLQDAIDSLGQKQDILEMTKEWNFIPRVVEELVK 295

Query: 898  LEHSQDEPDSLPKKHLYKQALACKDIYEKELEML-NDSFTNKKKLKTGENKRTGKERNE- 1071
            LE +++   SL K  LYK A+ CK+IYE E   L +D+  NKK+ KTG  ++  K+  + 
Sbjct: 296  LESTRNSHSSLSKADLYKHAITCKEIYEAEFSSLDDDALANKKQPKTGRGEKGKKKMTKA 355

Query: 1072 TPSRSADYXXXXXXXXXXXXXXKAYNSVASALCK 1173
            T S +A Y               AYN+VASA+CK
Sbjct: 356  TSSNAAGYDSDETVEMTEEEIDLAYNTVASAICK 389


>ref|XP_003597796.1| DNA repair protein XRCC1 [Medicago truncatula]
            gi|355486844|gb|AES68047.1| DNA repair protein XRCC1
            [Medicago truncatula]
          Length = 553

 Score =  352 bits (904), Expect = 9e-95
 Identities = 183/359 (50%), Positives = 239/359 (66%), Gaps = 11/359 (3%)
 Frame = +1

Query: 118  KRNLPSWMGSRQKQKN---------DHGGSQKQGRGGSEGGSK-ENDN-FSKILEGVVFV 264
            KRNLPSWM S     +         D GG +    G S   +K EN+N F+K++EGVVFV
Sbjct: 4    KRNLPSWMTSNDDDGHGNFGKRPTLDEGGEKSSEIGTSNKKTKVENENAFNKLMEGVVFV 63

Query: 265  LSGLVNPERGVLRSRAMEMGAEFQADWNSNCTLLVCAFPNTPKFRQVESDCGTIVSKEWI 444
            LSG VNPERG+LRSRAMEMGAEF+ DWNSNCTLLVCAFPNTPKFRQVE+DCGTIVS++WI
Sbjct: 64   LSGFVNPERGILRSRAMEMGAEFKQDWNSNCTLLVCAFPNTPKFRQVEADCGTIVSEDWI 123

Query: 445  SECYNKRKLVDIDTYLLHAGKPWRKQSKASKTTQDEEPSTSKKSQKQVEKAAHSKPNPKA 624
             ECY +RKLV+ID+YL+HAGKPWR   ++ +  ++++PS   K QK+VE+          
Sbjct: 124  QECYRQRKLVEIDSYLMHAGKPWRNGGRSHEVDEEQKPSVPHKPQKRVERETSEATTSIK 183

Query: 625  SLKHGVAFGTEQEYFVPSKVKKWAEDDFSKTISWLESQDEKPDPSDIKKIAAEGILTCLQ 804
            S   G      ++ F PS+VKKWA DD +KTI WLESQ+EKPDP++I KIAAEGILTCLQ
Sbjct: 184  S--KGKDTDDARKCFEPSEVKKWALDDLNKTIQWLESQEEKPDPNEITKIAAEGILTCLQ 241

Query: 805  DAIDSLKQDQEIQHISEQWNFVPRVVEELAKLEHSQDEPDSLPKKHLYKQALACKDIYEK 984
            DAI S+++ Q+I   +E W F+PRVVEELA+L    +   S+ K+ ++KQAL CK IYE+
Sbjct: 242  DAICSIEEKQDIGRGTEDWKFLPRVVEELARLYVVGNNKASMSKEDIHKQALDCKRIYEE 301

Query: 985  ELEMLNDSFTNKKKLKTGENKRTGKERNETPSRSADYXXXXXXXXXXXXXXKAYNSVAS 1161
            EL  L+   T K K+      + G+  + + S + +Y               AY +++S
Sbjct: 302  ELNRLDHELTKKSKINEEHRSKRGRTNDASSSGAVEYDSDDTIEMTEQEIDLAYKTLSS 360


>ref|XP_004135823.1| PREDICTED: uncharacterized protein LOC101221358 [Cucumis sativus]
            gi|449524142|ref|XP_004169082.1| PREDICTED:
            uncharacterized protein LOC101224279 [Cucumis sativus]
          Length = 372

 Score =  351 bits (900), Expect = 3e-94
 Identities = 191/357 (53%), Positives = 247/357 (69%), Gaps = 22/357 (6%)
 Frame = +1

Query: 88   MSDLSASPG---KKRNLPSWMG-------SRQKQKNDHGG----------SQKQGRGGSE 207
            MS+  A+ G    KR+LPSWM        SR K+ N                KQ +G  E
Sbjct: 1    MSNSKANEGGGSAKRSLPSWMSGKDDGSTSRGKKPNSSASVGNDLMVEAEEPKQEKGNGE 60

Query: 208  G--GSKENDNFSKILEGVVFVLSGLVNPERGVLRSRAMEMGAEFQADWNSNCTLLVCAFP 381
            G   S  + +FS++LEGVVFVLSG VNPER +LRS+A+EMGA+++ DWNS+CTLL+CAFP
Sbjct: 61   GPVSSSLHHDFSRLLEGVVFVLSGFVNPERSILRSQALEMGAQYKPDWNSDCTLLICAFP 120

Query: 382  NTPKFRQVESDCGTIVSKEWISECYNKRKLVDIDTYLLHAGKPWRKQSKASKTTQDEEPS 561
            NTPKFRQVESDCGTIVSKEWISECY +++LVDI++YLL+AGKPWR+   + + TQD  PS
Sbjct: 121  NTPKFRQVESDCGTIVSKEWISECYAQKRLVDIESYLLYAGKPWRRCDLSREATQD-IPS 179

Query: 562  TSKKSQKQVEKAAHSKPNPKASLKHGVAFGTEQEYFVPSKVKKWAEDDFSKTISWLESQD 741
             SKK Q+ VEK +H KP+ +  +         ++ F PSK+KKWA DD+ KT+SWLESQ+
Sbjct: 180  PSKKPQRVVEKTSHLKPH-EPEIAQSRRSNFSRDCFSPSKLKKWAIDDYHKTLSWLESQE 238

Query: 742  EKPDPSDIKKIAAEGILTCLQDAIDSLKQDQEIQHISEQWNFVPRVVEELAKLEHSQDEP 921
            EKPDPS+IKKIAAEGILTCLQDAIDSL Q+Q+I  ++E+W FVP+VVEELAKL + +   
Sbjct: 239  EKPDPSEIKKIAAEGILTCLQDAIDSLHQNQDINQMTEEWKFVPQVVEELAKLSNKK--- 295

Query: 922  DSLPKKHLYKQALACKDIYEKELEMLNDSFTNKKKLKTGENKRTGKERNETPSRSAD 1092
            +S+ K+ L +QA   K IYE EL  L +S   +KK +    K+  K  +ET    +D
Sbjct: 296  ESISKEELCRQATDSKSIYEVELNSLLESSPERKKKRI--VKKESKNGHETKEYDSD 350


>emb|CBI36187.3| unnamed protein product [Vitis vinifera]
          Length = 342

 Score =  350 bits (899), Expect = 4e-94
 Identities = 183/334 (54%), Positives = 224/334 (67%), Gaps = 28/334 (8%)
 Frame = +1

Query: 88   MSDLSASPGK------KRNLPSWMG-------SRQKQKNDHGGSQKQGRGGS------EG 210
            MSD  +S G       KR+LPSWM        +R K+  D GG +++  G         G
Sbjct: 1    MSDSKSSRGDGANKTVKRSLPSWMSDIENGSKARGKRSGDGGGQEERKEGEKPEQAKGNG 60

Query: 211  GSKEN---------DNFSKILEGVVFVLSGLVNPERGVLRSRAMEMGAEFQADWNSNCTL 363
            G   N          NFS +LEGVVFVLSG VNPER  LRS+A+EMGAE+Q DWNSNCTL
Sbjct: 61   GKSNNRPGASNLSTSNFSNLLEGVVFVLSGFVNPERSTLRSQALEMGAEYQPDWNSNCTL 120

Query: 364  LVCAFPNTPKFRQVESDCGTIVSKEWISECYNKRKLVDIDTYLLHAGKPWRKQSKASKTT 543
            LVCAFPNTPKFRQVE+DCGTIVSKEW+SECYN++KL DI+ YL+HAGKPWR+ +   +  
Sbjct: 121  LVCAFPNTPKFRQVEADCGTIVSKEWLSECYNQKKLADIEIYLMHAGKPWRRSNVPHQAK 180

Query: 544  QDEEPSTSKKSQKQVEKAAHSKPNPKASLKHGVAFGTEQEYFVPSKVKKWAEDDFSKTIS 723
             DEE S    S+ QVE+   SK     S          ++ F PS+VKKWA DD  KTIS
Sbjct: 181  NDEEASPPSNSKMQVERGLRSKLTASKS-----GSNPAKDLFSPSEVKKWAIDDLHKTIS 235

Query: 724  WLESQDEKPDPSDIKKIAAEGILTCLQDAIDSLKQDQEIQHISEQWNFVPRVVEELAKLE 903
            WL+SQ+EKP+PS+IKKIAA GILTCLQDAIDSL Q Q+I  ++++WNF+PRVVEEL KLE
Sbjct: 236  WLDSQEEKPEPSEIKKIAAGGILTCLQDAIDSLGQKQDILEMTKEWNFIPRVVEELVKLE 295

Query: 904  HSQDEPDSLPKKHLYKQALACKDIYEKELEMLND 1005
             +++   SL K  LYK A+ CK+IYE E    +D
Sbjct: 296  STRNSHSSLSKADLYKHAITCKEIYEAEFSKEDD 329


>ref|XP_002299631.1| predicted protein [Populus trichocarpa] gi|222846889|gb|EEE84436.1|
            predicted protein [Populus trichocarpa]
          Length = 340

 Score =  350 bits (898), Expect = 5e-94
 Identities = 176/320 (55%), Positives = 226/320 (70%), Gaps = 4/320 (1%)
 Frame = +1

Query: 88   MSDLSASPG----KKRNLPSWMGSRQKQKNDHGGSQKQGRGGSEGGSKENDNFSKILEGV 255
            MSD   S G    KKRNLPSWM S+  +   HG             +   D  SK+L+GV
Sbjct: 1    MSDSKRSGGGGSSKKRNLPSWMSSKDNENKSHGKKA--------AATSAEDEQSKLLDGV 52

Query: 256  VFVLSGLVNPERGVLRSRAMEMGAEFQADWNSNCTLLVCAFPNTPKFRQVESDCGTIVSK 435
            VFVLSG VNPER  LRS+A+EMGAE++ DW S+CTLLVCA+ NTPKFRQVE+DCGTIV K
Sbjct: 53   VFVLSGFVNPERATLRSQALEMGAEYRPDWTSDCTLLVCAYSNTPKFRQVEADCGTIVKK 112

Query: 436  EWISECYNKRKLVDIDTYLLHAGKPWRKQSKASKTTQDEEPSTSKKSQKQVEKAAHSKPN 615
            EWI ECY+++KLV+ID+YL+HAGKPWRK + + +   D++ S  +KS KQV+   HSKP 
Sbjct: 113  EWILECYSQKKLVEIDSYLMHAGKPWRKSNISHERGSDQKASPPRKSDKQVKSGLHSKPT 172

Query: 616  PKASLKHGVAFGTEQEYFVPSKVKKWAEDDFSKTISWLESQDEKPDPSDIKKIAAEGILT 795
               S K   A    +E F PSKVK+W  DD ++TISWLESQ+EKP+PS+IK+IAAEGIL 
Sbjct: 173  ASTSYKVR-ASNPSKECFSPSKVKEWVIDDLNRTISWLESQEEKPEPSEIKQIAAEGILI 231

Query: 796  CLQDAIDSLKQDQEIQHISEQWNFVPRVVEELAKLEHSQDEPDSLPKKHLYKQALACKDI 975
            CLQDAID L+Q+Q+++ I++QWN VP  VEE+ KL    +   SL K+ L ++A ACK+I
Sbjct: 232  CLQDAIDFLEQNQDVRKITDQWNVVPHAVEEMVKLVDGGNASSSLSKEDLCRKAKACKEI 291

Query: 976  YEKELEMLNDSFTNKKKLKT 1035
            YE EL  L+ S + K++LKT
Sbjct: 292  YEAELSSLDGSKSKKQRLKT 311


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