BLASTX nr result

ID: Angelica23_contig00017104 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica23_contig00017104
         (504 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN67815.1| hypothetical protein VITISV_002502 [Vitis vinifera]   216   1e-54
ref|XP_002272543.1| PREDICTED: DNA excision repair protein ERCC-...   213   2e-53
ref|XP_002529848.1| DNA repair and recombination protein RAD26, ...   212   2e-53
ref|XP_002307656.1| chromatin remodeling complex subunit [Populu...   208   4e-52
ref|XP_004151991.1| PREDICTED: DNA repair protein rhp26-like [Cu...   207   9e-52

>emb|CAN67815.1| hypothetical protein VITISV_002502 [Vitis vinifera]
          Length = 1249

 Score =  216 bits (551), Expect = 1e-54
 Identities = 109/167 (65%), Positives = 134/167 (80%)
 Frame = -3

Query: 502  TKDVTVFRLITRGTIEEKVYHRQIYKHFLTNKILKNPQQKRFFKSRDMKDLFILTDDGEH 323
            T+DVTV+RLITRGTIEEKVY RQIYKHFLTNKILKNPQQKRFFK+RDMKDLF+L DDGE 
Sbjct: 878  TRDVTVYRLITRGTIEEKVYQRQIYKHFLTNKILKNPQQKRFFKARDMKDLFVLNDDGED 937

Query: 322  GFTETSSIFSQLAEDVNVVGTHKNNEDDANLNKPTALSLSNDDSENGHDSNIKSSKKGKE 143
              TETS+IFSQL+EDVNVVG HK+N+D      P + S +    + G++S I SS+ G+ 
Sbjct: 938  ASTETSNIFSQLSEDVNVVGKHKDNQDKQKSIIPVS-SHACGAVDEGNNSTIGSSRSGEN 996

Query: 142  KAENSGKETDEESNILQSLFDAHGIHSAVNHDLIMNANDGEKLKLEE 2
            + ++   E D+E+NIL+SLFDAH +HSAVNHD IMNA+  EK++LEE
Sbjct: 997  EKDDQSDEMDKETNILRSLFDAHRLHSAVNHDAIMNAHGDEKMRLEE 1043


>ref|XP_002272543.1| PREDICTED: DNA excision repair protein ERCC-6-like [Vitis vinifera]
          Length = 1227

 Score =  213 bits (541), Expect = 2e-53
 Identities = 107/167 (64%), Positives = 133/167 (79%)
 Frame = -3

Query: 502  TKDVTVFRLITRGTIEEKVYHRQIYKHFLTNKILKNPQQKRFFKSRDMKDLFILTDDGEH 323
            T+DVTV+RLITRGTIEEKVY RQIYKHFLTNKILKNPQQKRFFK+RDMKDLF+L DDGE 
Sbjct: 856  TRDVTVYRLITRGTIEEKVYQRQIYKHFLTNKILKNPQQKRFFKARDMKDLFVLNDDGED 915

Query: 322  GFTETSSIFSQLAEDVNVVGTHKNNEDDANLNKPTALSLSNDDSENGHDSNIKSSKKGKE 143
              TETS+IFSQL+EDVNVVG HK+++D      P + S +    + G++S I  S+ G+ 
Sbjct: 916  ASTETSNIFSQLSEDVNVVGKHKDSQDKQKSIIPVS-SHACGAVDEGNNSTIGPSRSGEN 974

Query: 142  KAENSGKETDEESNILQSLFDAHGIHSAVNHDLIMNANDGEKLKLEE 2
            + ++   E D+E+NIL+SLFDAH +HSAVNHD IMNA+  EK++LEE
Sbjct: 975  EKDDQSDEMDKETNILRSLFDAHRLHSAVNHDAIMNAHGDEKMRLEE 1021


>ref|XP_002529848.1| DNA repair and recombination protein RAD26, putative [Ricinus
            communis] gi|223530676|gb|EEF32549.1| DNA repair and
            recombination protein RAD26, putative [Ricinus communis]
          Length = 1230

 Score =  212 bits (540), Expect = 2e-53
 Identities = 115/170 (67%), Positives = 131/170 (77%), Gaps = 4/170 (2%)
 Frame = -3

Query: 499  KDVTVFRLITRGTIEEKVYHRQIYKHFLTNKILKNPQQKRFFKSRDMKDLFILTDDGEHG 320
            +DVTV+RLITRGTIEEKVYHRQIYKHFLTNKILKNPQQ+RFFK+RDMKDLF L DDG  G
Sbjct: 859  RDVTVYRLITRGTIEEKVYHRQIYKHFLTNKILKNPQQRRFFKARDMKDLFTLNDDGGSG 918

Query: 319  FTETSSIFSQLAEDVNVVGTHKNNEDDANLNKPTALSLSND---DSENGHDSNIKSSK-K 152
             TETS+IFSQL+E+VNVVG  K  ED     K +A S ++D   D EN  +      K K
Sbjct: 919  LTETSNIFSQLSEEVNVVGAKKEKEDKKKHYKGSA-SHADDAALDKENSPEIGPSHRKGK 977

Query: 151  GKEKAENSGKETDEESNILQSLFDAHGIHSAVNHDLIMNANDGEKLKLEE 2
            GKEKA +S  E DEE+NIL+SL DA GIHSAVNHD IMNA+D EK +LEE
Sbjct: 978  GKEKANHSDGEVDEETNILRSLIDAQGIHSAVNHDAIMNAHDEEKTRLEE 1027


>ref|XP_002307656.1| chromatin remodeling complex subunit [Populus trichocarpa]
            gi|222857105|gb|EEE94652.1| chromatin remodeling complex
            subunit [Populus trichocarpa]
          Length = 1206

 Score =  208 bits (529), Expect = 4e-52
 Identities = 111/166 (66%), Positives = 128/166 (77%)
 Frame = -3

Query: 499  KDVTVFRLITRGTIEEKVYHRQIYKHFLTNKILKNPQQKRFFKSRDMKDLFILTDDGEHG 320
            KDVTV+RLIT GTIEEKVYHRQIYKHFLTNKILKNPQQ+RFF++RDMKDLF L DDGE G
Sbjct: 855  KDVTVYRLITGGTIEEKVYHRQIYKHFLTNKILKNPQQRRFFRARDMKDLFTLNDDGEGG 914

Query: 319  FTETSSIFSQLAEDVNVVGTHKNNEDDANLNKPTALSLSNDDSENGHDSNIKSSKKGKEK 140
             TETS+IFSQL+EDVNVVGT K        NK   ++   DD+              KEK
Sbjct: 915  STETSNIFSQLSEDVNVVGTKKEKLKKRKKNK--GIAQHADDAI-------------KEK 959

Query: 139  AENSGKETDEESNILQSLFDAHGIHSAVNHDLIMNANDGEKLKLEE 2
            A+ S  E DEE+NIL+SLFDA+GIHSAVNHD+IMNA+DGEK++LEE
Sbjct: 960  ADCSDGEVDEETNILKSLFDANGIHSAVNHDVIMNAHDGEKMRLEE 1005


>ref|XP_004151991.1| PREDICTED: DNA repair protein rhp26-like [Cucumis sativus]
            gi|449522123|ref|XP_004168077.1| PREDICTED: DNA repair
            protein rhp26-like [Cucumis sativus]
          Length = 1221

 Score =  207 bits (526), Expect = 9e-52
 Identities = 107/166 (64%), Positives = 128/166 (77%)
 Frame = -3

Query: 499  KDVTVFRLITRGTIEEKVYHRQIYKHFLTNKILKNPQQKRFFKSRDMKDLFILTDDGEHG 320
            +DVTV+RLITRGTIEEKVYHRQIYKHFLTNKILKNPQQKRFFK+RDMKDLF L +DG  G
Sbjct: 853  RDVTVYRLITRGTIEEKVYHRQIYKHFLTNKILKNPQQKRFFKARDMKDLFTLNEDGMDG 912

Query: 319  FTETSSIFSQLAEDVNVVGTHKNNEDDANLNKPTALSLSNDDSENGHDSNIKSSKKGKEK 140
             TETS+IFS L + VNVVG  KN +D    +  + L   + D EN   S I++S +    
Sbjct: 913  STETSNIFSALTDSVNVVGVQKNEKDGQKSSSGSVLFADSAD-ENLCKSEIETSGR-SSS 970

Query: 139  AENSGKETDEESNILQSLFDAHGIHSAVNHDLIMNANDGEKLKLEE 2
             E  G   DE++NIL+SLFDAHGIHSAVNHD+I+NA+DGEK++LEE
Sbjct: 971  IEGQGGGADEDTNILKSLFDAHGIHSAVNHDIIINADDGEKIRLEE 1016


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