BLASTX nr result

ID: Angelica23_contig00017006 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica23_contig00017006
         (473 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAA70700.1| transformer-SR ribonucleoprotein [Nicotiana taba...   102   2e-34
gb|AFK45871.1| unknown [Medicago truncatula]                          106   2e-33
ref|XP_003629227.1| ELAV-like protein [Medicago truncatula] gi|3...   106   2e-33
ref|XP_004158852.1| PREDICTED: uncharacterized LOC101219220 [Cuc...   104   3e-33
ref|XP_004135013.1| PREDICTED: uncharacterized RNA-binding prote...   104   3e-33

>emb|CAA70700.1| transformer-SR ribonucleoprotein [Nicotiana tabacum]
          Length = 235

 Score =  102 bits (254), Expect(2) = 2e-34
 Identities = 49/56 (87%), Positives = 54/56 (96%)
 Frame = -3

Query: 168 FNKEGKVASCFLVVEPRSRVSRGFAFITMDSVEDADRCIKHLNQSVLEGRYITVER 1
           F+KEGKV S FLVVEPRSR+SRGFAFITMDS+EDA+RCIKHLNQSVLEGRYITVE+
Sbjct: 86  FSKEGKVKSVFLVVEPRSRISRGFAFITMDSLEDANRCIKHLNQSVLEGRYITVEK 141



 Score = 68.6 bits (166), Expect(2) = 2e-34
 Identities = 39/80 (48%), Positives = 45/80 (56%)
 Frame = -1

Query: 473 RYSRSPSPYDQQLRLPNXXXXXXXXXXXXXXXXXXXXXXXXXXXRPAEVVNPGNTLYVTG 294
           RYSRSPSP+++  R  +                              EV NPGNTLYVTG
Sbjct: 15  RYSRSPSPWEKNSRSKSPPESYSRPRGRSRSRSRSRSRSRSRGR--GEVSNPGNTLYVTG 72

Query: 293 LSTRVTERDLEDHFNKEGKV 234
           LSTRVTERDLE+HF+KEGKV
Sbjct: 73  LSTRVTERDLEEHFSKEGKV 92


>gb|AFK45871.1| unknown [Medicago truncatula]
          Length = 270

 Score =  106 bits (265), Expect(2) = 2e-33
 Identities = 50/56 (89%), Positives = 55/56 (98%)
 Frame = -3

Query: 168 FNKEGKVASCFLVVEPRSRVSRGFAFITMDSVEDADRCIKHLNQSVLEGRYITVER 1
           F+KEGKVASCFLVVEPR+R+SRGFAF+TMDS EDA+RCIKHLNQSVLEGRYITVER
Sbjct: 82  FSKEGKVASCFLVVEPRTRISRGFAFVTMDSHEDAERCIKHLNQSVLEGRYITVER 137



 Score = 61.2 bits (147), Expect(2) = 2e-33
 Identities = 27/30 (90%), Positives = 30/30 (100%)
 Frame = -1

Query: 323 NPGNTLYVTGLSTRVTERDLEDHFNKEGKV 234
           NPGNTLYVTGLS+RVT+RDLEDHF+KEGKV
Sbjct: 59  NPGNTLYVTGLSSRVTDRDLEDHFSKEGKV 88


>ref|XP_003629227.1| ELAV-like protein [Medicago truncatula] gi|355523249|gb|AET03703.1|
           ELAV-like protein [Medicago truncatula]
          Length = 270

 Score =  106 bits (265), Expect(2) = 2e-33
 Identities = 50/56 (89%), Positives = 55/56 (98%)
 Frame = -3

Query: 168 FNKEGKVASCFLVVEPRSRVSRGFAFITMDSVEDADRCIKHLNQSVLEGRYITVER 1
           F+KEGKVASCFLVVEPR+R+SRGFAF+TMDS EDA+RCIKHLNQSVLEGRYITVER
Sbjct: 82  FSKEGKVASCFLVVEPRTRISRGFAFVTMDSHEDAERCIKHLNQSVLEGRYITVER 137



 Score = 61.2 bits (147), Expect(2) = 2e-33
 Identities = 27/30 (90%), Positives = 30/30 (100%)
 Frame = -1

Query: 323 NPGNTLYVTGLSTRVTERDLEDHFNKEGKV 234
           NPGNTLYVTGLS+RVT+RDLEDHF+KEGKV
Sbjct: 59  NPGNTLYVTGLSSRVTDRDLEDHFSKEGKV 88


>ref|XP_004158852.1| PREDICTED: uncharacterized LOC101219220 [Cucumis sativus]
          Length = 244

 Score =  104 bits (260), Expect(2) = 3e-33
 Identities = 46/56 (82%), Positives = 56/56 (100%)
 Frame = -3

Query: 168 FNKEGKVASCFLVVEPRSRVSRGFAFITMDSVEDADRCIKHLNQSVLEGRYITVER 1
           F+KEGKVASCFLVVEPR+R+SRGFAF+TMD+V+DA+RC+KHLNQS+LEGRYITVE+
Sbjct: 85  FSKEGKVASCFLVVEPRTRISRGFAFVTMDNVDDANRCVKHLNQSILEGRYITVEK 140



 Score = 62.4 bits (150), Expect(2) = 3e-33
 Identities = 28/30 (93%), Positives = 30/30 (100%)
 Frame = -1

Query: 323 NPGNTLYVTGLSTRVTERDLEDHFNKEGKV 234
           NPGNTLYVTGLSTRVTERDLE+HF+KEGKV
Sbjct: 62  NPGNTLYVTGLSTRVTERDLEEHFSKEGKV 91


>ref|XP_004135013.1| PREDICTED: uncharacterized RNA-binding protein C25G10.01-like,
           partial [Cucumis sativus]
          Length = 238

 Score =  104 bits (260), Expect(2) = 3e-33
 Identities = 46/56 (82%), Positives = 56/56 (100%)
 Frame = -3

Query: 168 FNKEGKVASCFLVVEPRSRVSRGFAFITMDSVEDADRCIKHLNQSVLEGRYITVER 1
           F+KEGKVASCFLVVEPR+R+SRGFAF+TMD+V+DA+RC+KHLNQS+LEGRYITVE+
Sbjct: 79  FSKEGKVASCFLVVEPRTRISRGFAFVTMDNVDDANRCVKHLNQSILEGRYITVEK 134



 Score = 62.4 bits (150), Expect(2) = 3e-33
 Identities = 28/30 (93%), Positives = 30/30 (100%)
 Frame = -1

Query: 323 NPGNTLYVTGLSTRVTERDLEDHFNKEGKV 234
           NPGNTLYVTGLSTRVTERDLE+HF+KEGKV
Sbjct: 56  NPGNTLYVTGLSTRVTERDLEEHFSKEGKV 85


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