BLASTX nr result
ID: Angelica23_contig00016949
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Angelica23_contig00016949
(1149 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002266580.1| PREDICTED: U5 small nuclear ribonucleoprotei... 447 e-123
ref|XP_004165711.1| PREDICTED: LOW QUALITY PROTEIN: U5 small nuc... 446 e-123
ref|XP_004147618.1| PREDICTED: U5 small nuclear ribonucleoprotei... 446 e-123
emb|CAN75158.1| hypothetical protein VITISV_042645 [Vitis vinifera] 446 e-123
ref|NP_173520.1| putative U5 small nuclear ribonucleoprotein hel... 436 e-120
>ref|XP_002266580.1| PREDICTED: U5 small nuclear ribonucleoprotein 200 kDa helicase [Vitis
vinifera]
Length = 2177
Score = 447 bits (1150), Expect = e-123
Identities = 217/300 (72%), Positives = 262/300 (87%), Gaps = 1/300 (0%)
Frame = -1
Query: 1149 GLLEILASAAEYEVLPVRLGEEELIRKLINHQRFSFDSPKCTDPRVKANALLQAHFSRQL 970
GLLEILASA+EY +P+R GEE+LIR+LINHQRFSF++PKCTDP +KANALLQAHFSRQ+
Sbjct: 1878 GLLEILASASEYAQIPIRPGEEDLIRRLINHQRFSFENPKCTDPHIKANALLQAHFSRQI 1937
Query: 969 MSGNLATDQKEVLSSASRLLHAMVDVISSNGWLSLALLVMELSQMVTQGMWQHDSRLLQL 790
+ GNLA DQ+EVL SA RLL AMVDVISSNGWL+LALL ME+SQMVTQGMW+ DS LLQL
Sbjct: 1938 VGGNLALDQREVLLSAGRLLQAMVDVISSNGWLNLALLAMEVSQMVTQGMWERDSMLLQL 1997
Query: 789 PYFTKELAKRCEENHVKSVETVFDLAEME-NERQELLQMSDAQLFEIAKICNRLPDIDLT 613
P+FTK+LAKRC+EN KS+ETVFDL EME +ER+ELLQMSD+QL +IA+ CNR P+ID+T
Sbjct: 1998 PHFTKDLAKRCQENPGKSIETVFDLVEMEDDERRELLQMSDSQLLDIARFCNRFPNIDIT 2057
Query: 612 FDILNNEDIRTREKISLQVTLERNLEGSTEVGPVNAPRYPKTKEEGWWLVVGDTESNQLL 433
+++L++E++R + I+LQV LER+LEG TEVG V+APRYPK KEEGWWLVVGDT+SNQLL
Sbjct: 2058 YEVLDSENLRAGDDITLQVMLERDLEGRTEVGSVDAPRYPKAKEEGWWLVVGDTKSNQLL 2117
Query: 432 AIKRVTLQRKLEVKLDYGAPTQSGRKDYTLYFMCDSYMGYDQEYNFSVDVKDIVSQEDDS 253
AIKRV LQRK +VKL++ P ++GRK YTLYFMCDSY+G DQEY+FSVDV D E+DS
Sbjct: 2118 AIKRVALQRKSKVKLEFAVPAEAGRKSYTLYFMCDSYLGCDQEYSFSVDVMDASGPEEDS 2177
Score = 63.9 bits (154), Expect = 7e-08
Identities = 54/239 (22%), Positives = 107/239 (44%), Gaps = 1/239 (0%)
Frame = -1
Query: 1146 LLEILASAAEYEVLPVRLGEEELIRKLINHQRFSFDSPKCTDPRVKANALLQAHFSRQLM 967
L + + + E++ + VR E+ + KL++ +P K N LLQA+ S+ +
Sbjct: 1045 LCRLFSLSEEFKYVTVRQDEKMELAKLLDRVPIPIKE-SLEEPSAKINVLLQAYISQLKL 1103
Query: 966 SG-NLATDQKEVLSSASRLLHAMVDVISSNGWLSLALLVMELSQMVTQGMWQHDSRLLQL 790
G +L +D + SA RL+ A+ +++ GW L + L +MV + MW + L Q
Sbjct: 1104 EGLSLTSDMVFITQSAGRLVRALFEIVLKRGWAQLTEKALNLCKMVNKRMWSVQTPLRQF 1163
Query: 789 PYFTKELAKRCEENHVKSVETVFDLAEMENERQELLQMSDAQLFEIAKICNRLPDIDLTF 610
E+ + E+ + + E +DL+ E EL++ + K ++ P +DL
Sbjct: 1164 NAIPNEILMKLEKKDL-AWERYYDLS--SQELGELIRYPKMGR-TLHKFIHQFPKLDLAA 1219
Query: 609 DILNNEDIRTREKISLQVTLERNLEGSTEVGPVNAPRYPKTKEEGWWLVVGDTESNQLL 433
+ TR + +++T+ + + +V P +W++V D + +L
Sbjct: 1220 HV----QPITRTVLRVELTITPDFQWEDKVHGFVEP---------FWVIVEDNDGEYIL 1265
>ref|XP_004165711.1| PREDICTED: LOW QUALITY PROTEIN: U5 small nuclear ribonucleoprotein
200 kDa helicase-like [Cucumis sativus]
Length = 2175
Score = 446 bits (1147), Expect = e-123
Identities = 216/299 (72%), Positives = 262/299 (87%), Gaps = 1/299 (0%)
Frame = -1
Query: 1149 GLLEILASAAEYEVLPVRLGEEELIRKLINHQRFSFDSPKCTDPRVKANALLQAHFSRQL 970
GLLEILASA+EY +LP+R GEEELIR+LINHQRFSF++PKCTDP VKANALLQA+FSRQ
Sbjct: 1876 GLLEILASASEYALLPIRPGEEELIRRLINHQRFSFENPKCTDPHVKANALLQAYFSRQS 1935
Query: 969 MSGNLATDQKEVLSSASRLLHAMVDVISSNGWLSLALLVMELSQMVTQGMWQHDSRLLQL 790
+ GNLA DQ+EV+ SASRLL AMVDVISSNGWLSLALL ME+SQMVTQG+W+ DS LLQL
Sbjct: 1936 VGGNLALDQREVVISASRLLQAMVDVISSNGWLSLALLAMEVSQMVTQGLWERDSMLLQL 1995
Query: 789 PYFTKELAKRCEENHVKSVETVFDLAEME-NERQELLQMSDAQLFEIAKICNRLPDIDLT 613
P+FTKELAKRC+EN K++ET+FDL EME NER ELLQMSD+QL +IA+ CNR P+ID+
Sbjct: 1996 PHFTKELAKRCQENSGKNIETIFDLVEMEDNERHELLQMSDSQLLDIARFCNRFPNIDMA 2055
Query: 612 FDILNNEDIRTREKISLQVTLERNLEGSTEVGPVNAPRYPKTKEEGWWLVVGDTESNQLL 433
+++L+ E++ E ++LQVTLER+L+G TEVGPV+A RYPK KEEGWWLVVGDT+SNQLL
Sbjct: 2056 YEVLDGENVAAGENVTLQVTLERDLDGRTEVGPVDALRYPKAKEEGWWLVVGDTKSNQLL 2115
Query: 432 AIKRVTLQRKLEVKLDYGAPTQSGRKDYTLYFMCDSYMGYDQEYNFSVDVKDIVSQEDD 256
AIKRV+LQRK +VKLD+ AP +G+K YTLYFMCDSY+G DQEY+F+VDVKD + ++D
Sbjct: 2116 AIKRVSLQRKAKVKLDFTAPADTGKKSYTLYFMCDSYLGCDQEYSFTVDVKDAAAFDED 2174
Score = 62.4 bits (150), Expect = 2e-07
Identities = 39/149 (26%), Positives = 74/149 (49%), Gaps = 1/149 (0%)
Frame = -1
Query: 1146 LLEILASAAEYEVLPVRLGEEELIRKLINHQRFSFDSPKCTDPRVKANALLQAHFSRQLM 967
L + + + E++ + VR E+ + KL+ +P K N LLQA+ S+ +
Sbjct: 1043 LCRLFSLSEEFKYVTVRQDEKMELAKLLERVPIPIKE-SLEEPSAKINVLLQAYISQLKL 1101
Query: 966 SG-NLATDQKEVLSSASRLLHAMVDVISSNGWLSLALLVMELSQMVTQGMWQHDSRLLQL 790
G +L +D + SA RL+ A+ +++ GW LA + L +MV++ MW + L Q
Sbjct: 1102 EGLSLTSDMVFITQSAGRLMRALFEIVLKRGWAQLAEKALNLCKMVSKRMWSVQTPLRQF 1161
Query: 789 PYFTKELAKRCEENHVKSVETVFDLAEME 703
+ ++ + E+ + + E +DL+ E
Sbjct: 1162 HGISNDILMKLEKKDL-AWERYYDLSSQE 1189
>ref|XP_004147618.1| PREDICTED: U5 small nuclear ribonucleoprotein 200 kDa helicase-like
[Cucumis sativus]
Length = 2175
Score = 446 bits (1147), Expect = e-123
Identities = 216/299 (72%), Positives = 262/299 (87%), Gaps = 1/299 (0%)
Frame = -1
Query: 1149 GLLEILASAAEYEVLPVRLGEEELIRKLINHQRFSFDSPKCTDPRVKANALLQAHFSRQL 970
GLLEILASA+EY +LP+R GEEELIR+LINHQRFSF++PKCTDP VKANALLQA+FSRQ
Sbjct: 1876 GLLEILASASEYALLPIRPGEEELIRRLINHQRFSFENPKCTDPHVKANALLQAYFSRQS 1935
Query: 969 MSGNLATDQKEVLSSASRLLHAMVDVISSNGWLSLALLVMELSQMVTQGMWQHDSRLLQL 790
+ GNLA DQ+EV+ SASRLL AMVDVISSNGWLSLALL ME+SQMVTQG+W+ DS LLQL
Sbjct: 1936 VGGNLALDQREVVISASRLLQAMVDVISSNGWLSLALLAMEVSQMVTQGLWERDSMLLQL 1995
Query: 789 PYFTKELAKRCEENHVKSVETVFDLAEME-NERQELLQMSDAQLFEIAKICNRLPDIDLT 613
P+FTKELAKRC+EN K++ET+FDL EME NER ELLQMSD+QL +IA+ CNR P+ID+
Sbjct: 1996 PHFTKELAKRCQENSGKNIETIFDLVEMEDNERHELLQMSDSQLLDIARFCNRFPNIDMA 2055
Query: 612 FDILNNEDIRTREKISLQVTLERNLEGSTEVGPVNAPRYPKTKEEGWWLVVGDTESNQLL 433
+++L+ E++ E ++LQVTLER+L+G TEVGPV+A RYPK KEEGWWLVVGDT+SNQLL
Sbjct: 2056 YEVLDGENVAAGENVTLQVTLERDLDGRTEVGPVDALRYPKAKEEGWWLVVGDTKSNQLL 2115
Query: 432 AIKRVTLQRKLEVKLDYGAPTQSGRKDYTLYFMCDSYMGYDQEYNFSVDVKDIVSQEDD 256
AIKRV+LQRK +VKLD+ AP +G+K YTLYFMCDSY+G DQEY+F+VDVKD + ++D
Sbjct: 2116 AIKRVSLQRKAKVKLDFTAPADTGKKSYTLYFMCDSYLGCDQEYSFTVDVKDAAAFDED 2174
Score = 62.4 bits (150), Expect = 2e-07
Identities = 39/149 (26%), Positives = 74/149 (49%), Gaps = 1/149 (0%)
Frame = -1
Query: 1146 LLEILASAAEYEVLPVRLGEEELIRKLINHQRFSFDSPKCTDPRVKANALLQAHFSRQLM 967
L + + + E++ + VR E+ + KL+ +P K N LLQA+ S+ +
Sbjct: 1043 LCRLFSLSEEFKYVTVRQDEKMELAKLLERVPIPIKE-SLEEPSAKINVLLQAYISQLKL 1101
Query: 966 SG-NLATDQKEVLSSASRLLHAMVDVISSNGWLSLALLVMELSQMVTQGMWQHDSRLLQL 790
G +L +D + SA RL+ A+ +++ GW LA + L +MV++ MW + L Q
Sbjct: 1102 EGLSLTSDMVFITQSAGRLMRALFEIVLKRGWAQLAEKALNLCKMVSKRMWSVQTPLRQF 1161
Query: 789 PYFTKELAKRCEENHVKSVETVFDLAEME 703
+ ++ + E+ + + E +DL+ E
Sbjct: 1162 HGISNDILMKLEKKDL-AWERYYDLSSQE 1189
>emb|CAN75158.1| hypothetical protein VITISV_042645 [Vitis vinifera]
Length = 2144
Score = 446 bits (1147), Expect = e-123
Identities = 217/300 (72%), Positives = 261/300 (87%), Gaps = 1/300 (0%)
Frame = -1
Query: 1149 GLLEILASAAEYEVLPVRLGEEELIRKLINHQRFSFDSPKCTDPRVKANALLQAHFSRQL 970
GLLEILASA+EY +P+R GEE+LIR+LINHQRFSF++PKCTDP +KANALLQAHFSRQ+
Sbjct: 1845 GLLEILASASEYAQIPIRPGEEDLIRRLINHQRFSFENPKCTDPHIKANALLQAHFSRQI 1904
Query: 969 MSGNLATDQKEVLSSASRLLHAMVDVISSNGWLSLALLVMELSQMVTQGMWQHDSRLLQL 790
+ GNLA DQ+EVL SA RLL AMVDVISSNGWL+LALL ME+SQMVTQGMW+ DS LLQL
Sbjct: 1905 VGGNLALDQREVLLSAGRLLQAMVDVISSNGWLNLALLAMEVSQMVTQGMWERDSMLLQL 1964
Query: 789 PYFTKELAKRCEENHVKSVETVFDLAEME-NERQELLQMSDAQLFEIAKICNRLPDIDLT 613
P+FTK+LAKRC+EN KS+ETVFDL EME +ER+ELLQMSD+QL +IA+ CNR P+ID T
Sbjct: 1965 PHFTKDLAKRCQENPGKSIETVFDLVEMEDDERRELLQMSDSQLLDIARFCNRFPNIDXT 2024
Query: 612 FDILNNEDIRTREKISLQVTLERNLEGSTEVGPVNAPRYPKTKEEGWWLVVGDTESNQLL 433
+++L++E++R + I+LQV LER+LEG TEVG V+APRYPK KEEGWWLVVGDT+SNQLL
Sbjct: 2025 YEVLDSENLRAGDDITLQVMLERDLEGRTEVGSVDAPRYPKAKEEGWWLVVGDTKSNQLL 2084
Query: 432 AIKRVTLQRKLEVKLDYGAPTQSGRKDYTLYFMCDSYMGYDQEYNFSVDVKDIVSQEDDS 253
AIKRV LQRK +VKL++ P ++GRK YTLYFMCDSY+G DQEY+FSVDV D E+DS
Sbjct: 2085 AIKRVALQRKSKVKLEFAVPAEAGRKSYTLYFMCDSYLGCDQEYSFSVDVMDASGPEEDS 2144
Score = 63.9 bits (154), Expect = 7e-08
Identities = 54/239 (22%), Positives = 107/239 (44%), Gaps = 1/239 (0%)
Frame = -1
Query: 1146 LLEILASAAEYEVLPVRLGEEELIRKLINHQRFSFDSPKCTDPRVKANALLQAHFSRQLM 967
L + + + E++ + VR E+ + KL++ +P K N LLQA+ S+ +
Sbjct: 1012 LCRLFSLSEEFKYVTVRQDEKMELAKLLDRVPIPIKE-SLEEPSAKINVLLQAYISQLKL 1070
Query: 966 SG-NLATDQKEVLSSASRLLHAMVDVISSNGWLSLALLVMELSQMVTQGMWQHDSRLLQL 790
G +L +D + SA RL+ A+ +++ GW L + L +MV + MW + L Q
Sbjct: 1071 EGLSLTSDMVFITQSAGRLVRALFEIVLKRGWAQLTEKALNLCKMVNKRMWSVQTPLRQF 1130
Query: 789 PYFTKELAKRCEENHVKSVETVFDLAEMENERQELLQMSDAQLFEIAKICNRLPDIDLTF 610
E+ + E+ + + E +DL+ E EL++ + K ++ P +DL
Sbjct: 1131 NAIPNEILMKLEKKDL-AWERYYDLS--SQELGELIRYPKMGR-TLHKFIHQFPKLDLAA 1186
Query: 609 DILNNEDIRTREKISLQVTLERNLEGSTEVGPVNAPRYPKTKEEGWWLVVGDTESNQLL 433
+ TR + +++T+ + + +V P +W++V D + +L
Sbjct: 1187 HV----QPITRTVLRVELTITPDFQWEDKVHGFVEP---------FWVIVEDNDGEYIL 1232
>ref|NP_173520.1| putative U5 small nuclear ribonucleoprotein helicase [Arabidopsis
thaliana] gi|334182730|ref|NP_001185050.1| putative U5
small nuclear ribonucleoprotein helicase [Arabidopsis
thaliana] gi|4836892|gb|AAD30595.1|AC007369_5 Putative
RNA helicase [Arabidopsis thaliana]
gi|332191925|gb|AEE30046.1| putative U5 small nuclear
ribonucleoprotein helicase [Arabidopsis thaliana]
gi|332191926|gb|AEE30047.1| putative U5 small nuclear
ribonucleoprotein helicase [Arabidopsis thaliana]
Length = 2171
Score = 436 bits (1121), Expect = e-120
Identities = 209/291 (71%), Positives = 260/291 (89%), Gaps = 1/291 (0%)
Frame = -1
Query: 1149 GLLEILASAAEYEVLPVRLGEEELIRKLINHQRFSFDSPKCTDPRVKANALLQAHFSRQL 970
GLLEIL SA+EY+++P+R GEE+ +R+LINHQRFSF++PKCTDP VKANALLQAHFSRQ
Sbjct: 1871 GLLEILTSASEYDMIPIRPGEEDTVRRLINHQRFSFENPKCTDPHVKANALLQAHFSRQN 1930
Query: 969 MSGNLATDQKEVLSSASRLLHAMVDVISSNGWLSLALLVMELSQMVTQGMWQHDSRLLQL 790
+ GNLA DQ++VL SA+RLL AMVDVISSNGWL+LALL ME+SQMVTQGMW+ DS LLQL
Sbjct: 1931 IGGNLAMDQRDVLLSATRLLQAMVDVISSNGWLNLALLAMEVSQMVTQGMWERDSMLLQL 1990
Query: 789 PYFTKELAKRCEENHVKSVETVFDLAEMEN-ERQELLQMSDAQLFEIAKICNRLPDIDLT 613
P+FTK+LAKRC+EN K++ETVFDL EME+ ERQELL+MSDAQL +IA+ CNR P+IDLT
Sbjct: 1991 PHFTKDLAKRCQENPGKNIETVFDLVEMEDEERQELLKMSDAQLLDIARFCNRFPNIDLT 2050
Query: 612 FDILNNEDIRTREKISLQVTLERNLEGSTEVGPVNAPRYPKTKEEGWWLVVGDTESNQLL 433
++I+ +E++ ++++LQV LER++EG TEVGPV++ RYPKTKEEGWWLVVGDT++NQLL
Sbjct: 2051 YEIVGSEEVNPGKEVTLQVMLERDMEGRTEVGPVDSLRYPKTKEEGWWLVVGDTKTNQLL 2110
Query: 432 AIKRVTLQRKLEVKLDYGAPTQSGRKDYTLYFMCDSYMGYDQEYNFSVDVK 280
AIKRV+LQRK++VKLD+ AP++ G K YTLYFMCDSY+G DQEY+FSVDVK
Sbjct: 2111 AIKRVSLQRKVKVKLDFTAPSEPGEKSYTLYFMCDSYLGCDQEYSFSVDVK 2161
Score = 62.4 bits (150), Expect = 2e-07
Identities = 54/239 (22%), Positives = 111/239 (46%), Gaps = 1/239 (0%)
Frame = -1
Query: 1146 LLEILASAAEYEVLPVRLGEEELIRKLINHQRFSFDSPKCTDPRVKANALLQAHFSRQLM 967
L + + + E++ + VR E+ + KL++ +P K N LLQA+ S+ +
Sbjct: 1038 LYRLFSLSDEFKYVTVRQDEKMELAKLLDRVPIPIKET-LEEPSAKINVLLQAYISQLKL 1096
Query: 966 SG-NLATDQKEVLSSASRLLHAMVDVISSNGWLSLALLVMELSQMVTQGMWQHDSRLLQL 790
G +L +D + SA RL+ A+ +++ GW LA + LS+MV + MW + L Q
Sbjct: 1097 EGLSLTSDMVYITQSAGRLVRALYEIVLKRGWAQLAEKALNLSKMVGKRMWSVQTPLRQF 1156
Query: 789 PYFTKELAKRCEENHVKSVETVFDLAEMENERQELLQMSDAQLFEIAKICNRLPDIDLTF 610
+ ++ + E+ + E +DL+ E EL++ S + K ++ P + L+
Sbjct: 1157 HGLSNDILMQLEKKDL-VWERYYDLS--AQELGELIR-SPKMGKPLHKFIHQFPKVTLSA 1212
Query: 609 DILNNEDIRTREKISLQVTLERNLEGSTEVGPVNAPRYPKTKEEGWWLVVGDTESNQLL 433
+ TR +++++T+ + ++ P +W++V D + ++L
Sbjct: 1213 HV----QPITRTVLNVELTVTPDFLWDEKIHKYVEP---------FWIIVEDNDGEKIL 1258