BLASTX nr result

ID: Angelica23_contig00016884 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica23_contig00016884
         (1289 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002265768.1| PREDICTED: rhomboid protein 1, mitochondrial...   279   1e-72
emb|CBI15323.3| unnamed protein product [Vitis vinifera]              276   1e-71
ref|XP_004137444.1| PREDICTED: uncharacterized protein C13E7.11-...   244   3e-62
ref|XP_002309495.1| predicted protein [Populus trichocarpa] gi|2...   236   9e-60
ref|NP_564058.1| RHOMBOID-like protein 12 [Arabidopsis thaliana]...   226   1e-56

>ref|XP_002265768.1| PREDICTED: rhomboid protein 1, mitochondrial [Vitis vinifera]
          Length = 333

 Score =  279 bits (713), Expect = 1e-72
 Identities = 159/313 (50%), Positives = 204/313 (65%), Gaps = 21/313 (6%)
 Frame = -2

Query: 1177 MQRLLSLRLLTKKNPTSNIISKTNPI---HPQNAYGNL-----VSHYSTTSLIKPHNFN- 1025
            MQRL+SL++ +  + +  + +K + +   HP   + +L       H  TTSLI P +F  
Sbjct: 1    MQRLISLKVAS--DISRRVFTKPSSLLHSHPNKTFFSLSQPSPTHHLHTTSLIPPPHFPW 58

Query: 1024 -----------GFLSKSLLVNQFLQKSSALFKAPSKGLVDFKWVFSTSYFLQKKXXXXXX 878
                       GF+S   L+ QFL   +AL K  SK L   +  F  + F ++       
Sbjct: 59   PSHHGLSRSVYGFISNPTLLKQFLP--TALLKGSSKTLAASRVGFLRAQFPRRSFGFSPS 116

Query: 877  XXXXXSQGRRWIQRLDSDNVVLGLILANVAVFLLWRSADYQFMVNNFMISLVNFKSGRVH 698
                  + R W+  L +++VVLGLI+ANVAVF+LWR +D++FM+NNF ISL NFKSGR+H
Sbjct: 117  FDSYGRRWRSWLSGLSTNDVVLGLIIANVAVFMLWRISDHRFMLNNFTISLDNFKSGRIH 176

Query: 697  TMITSAFSHIDAGHIISNMIGLYFFGNSIGSAFGPEXXXXXXXXXXXXGSVFYLVYHAFL 518
            T+ITSAFSHID GH+ISNMIGLYFFG +IG  FGPE            GSVFYLV+HAF+
Sbjct: 177  TLITSAFSHIDIGHLISNMIGLYFFGMNIGRVFGPEFLLKLYLAGAVVGSVFYLVHHAFM 236

Query: 517  IP-SKSNQMWGRSPSSISGLGASGAVNAIMLLDIFLNPKKTIYFQMFIPVPAILVGIFII 341
             P SK  QMW  +PS+I GLGASGAVNAIMLLDIFL P+ T+Y + FIPVPAIL+GIF+I
Sbjct: 237  APSSKGQQMWSINPSAIPGLGASGAVNAIMLLDIFLFPRSTLYLEFFIPVPAILLGIFLI 296

Query: 340  GKDMLRILEGDTQ 302
            GKDMLRI+EGD Q
Sbjct: 297  GKDMLRIIEGDDQ 309


>emb|CBI15323.3| unnamed protein product [Vitis vinifera]
          Length = 362

 Score =  276 bits (705), Expect = 1e-71
 Identities = 157/301 (52%), Positives = 196/301 (65%), Gaps = 13/301 (4%)
 Frame = -2

Query: 1165 LSLRLLTKKNPTSNIISKTNPIHPQNAYGNLVSHYSTTSLIKPHNFN------------G 1022
            +S R+ TK  P+S + S  N      +  +   H  TTSLI P +F             G
Sbjct: 42   ISRRVFTK--PSSLLHSHPNKTFFSLSQPSPTHHLHTTSLIPPPHFPWPSHHGLSRSVYG 99

Query: 1021 FLSKSLLVNQFLQKSSALFKAPSKGLVDFKWVFSTSYFLQKKXXXXXXXXXXXSQGRRWI 842
            F+S   L+ QFL   +AL K  SK L   +  F  + F ++             + R W+
Sbjct: 100  FISNPTLLKQFLP--TALLKGSSKTLAASRVGFLRAQFPRRSFGFSPSFDSYGRRWRSWL 157

Query: 841  QRLDSDNVVLGLILANVAVFLLWRSADYQFMVNNFMISLVNFKSGRVHTMITSAFSHIDA 662
              L +++VVLGLI+ANVAVF+LWR +D++FM+NNF ISL NFKSGR+HT+ITSAFSHID 
Sbjct: 158  SGLSTNDVVLGLIIANVAVFMLWRISDHRFMLNNFTISLDNFKSGRIHTLITSAFSHIDI 217

Query: 661  GHIISNMIGLYFFGNSIGSAFGPEXXXXXXXXXXXXGSVFYLVYHAFLIP-SKSNQMWGR 485
            GH+ISNMIGLYFFG +IG  FGPE            GSVFYLV+HAF+ P SK  QMW  
Sbjct: 218  GHLISNMIGLYFFGMNIGRVFGPEFLLKLYLAGAVVGSVFYLVHHAFMAPSSKGQQMWSI 277

Query: 484  SPSSISGLGASGAVNAIMLLDIFLNPKKTIYFQMFIPVPAILVGIFIIGKDMLRILEGDT 305
            +PS+I GLGASGAVNAIMLLDIFL P+ T+Y + FIPVPAIL+GIF+IGKDMLRI+EGD 
Sbjct: 278  NPSAIPGLGASGAVNAIMLLDIFLFPRSTLYLEFFIPVPAILLGIFLIGKDMLRIIEGDD 337

Query: 304  Q 302
            Q
Sbjct: 338  Q 338


>ref|XP_004137444.1| PREDICTED: uncharacterized protein C13E7.11-like [Cucumis sativus]
          Length = 336

 Score =  244 bits (624), Expect = 3e-62
 Identities = 132/244 (54%), Positives = 161/244 (65%), Gaps = 2/244 (0%)
 Frame = -2

Query: 1027 NGFLSKSLLVNQFL-QKSSALFKAPSKGLVDFKWVFSTSYFLQKKXXXXXXXXXXXSQGR 851
            +GF S  ++  +F+   S+  FK   K +V+ + +F+ + F + K              R
Sbjct: 68   HGFFSVPVVGKRFIVNPSNTYFKGSMKSVVESRSLFTGTPFSKLKFQLKPGFVHQWGGRR 127

Query: 850  RWIQRLDSDNVVLGLILANVAVFLLWRSADYQFMVNNFMISLVNFKSGRVHTMITSAFSH 671
             W QRL  + VVLGLI+ANVAVFLLWR AD  FM  NF ISL N +SGR+HT+ITSAFSH
Sbjct: 128  SWFQRLTPNEVVLGLIIANVAVFLLWRIADPIFMSKNFTISLENVRSGRIHTLITSAFSH 187

Query: 670  IDAGHIISNMIGLYFFGNSIGSAFGPEXXXXXXXXXXXXGSVFYLVYHAF-LIPSKSNQM 494
            ID GHI+SNM+GLYFFG +IG+ FG E            GS FYL +H F  + SKS   
Sbjct: 188  IDTGHIVSNMVGLYFFGMNIGNVFGSEFLLKLYLAGAIGGSAFYLAHHLFQALSSKSRSF 247

Query: 493  WGRSPSSISGLGASGAVNAIMLLDIFLNPKKTIYFQMFIPVPAILVGIFIIGKDMLRILE 314
            WG  P    GLGASGAVNAIMLLDIFL PK T+Y Q FIPVPAIL+GIF+IGKDMLR+LE
Sbjct: 248  WGEDPVRAKGLGASGAVNAIMLLDIFLFPKATLYLQFFIPVPAILLGIFLIGKDMLRMLE 307

Query: 313  GDTQ 302
             D+Q
Sbjct: 308  NDSQ 311


>ref|XP_002309495.1| predicted protein [Populus trichocarpa] gi|222855471|gb|EEE93018.1|
           predicted protein [Populus trichocarpa]
          Length = 242

 Score =  236 bits (602), Expect = 9e-60
 Identities = 115/184 (62%), Positives = 139/184 (75%), Gaps = 1/184 (0%)
 Frame = -2

Query: 853 RRWIQRLDSDNVVLGLILANVAVFLLWRSADYQFMVNNFMISLVNFKSGRVHTMITSAFS 674
           R W  RL +DNVVLGLI+AN AVF+LWR  D +FM+ NFMISL NF+SGR+HT++TSAFS
Sbjct: 33  RSWFNRLSADNVVLGLIIANAAVFMLWRIEDQKFMMENFMISLDNFRSGRIHTLVTSAFS 92

Query: 673 HIDAGHIISNMIGLYFFGNSIGSAFGPEXXXXXXXXXXXXGSVFYLVYHAFL-IPSKSNQ 497
           HID GHI  NMIGLYFFG +I   FGPE            GSVFYL++H ++ + SK   
Sbjct: 93  HIDIGHIAFNMIGLYFFGTNIARTFGPEFLLKLYLAGAIGGSVFYLLHHGYMDLSSKGQG 152

Query: 496 MWGRSPSSISGLGASGAVNAIMLLDIFLNPKKTIYFQMFIPVPAILVGIFIIGKDMLRIL 317
           MW R  S   GLGASGAVNAIMLLDIFLNP+ T+YF   IPVPAIL+GIF+IGKD+LR++
Sbjct: 153 MWARDSSRTPGLGASGAVNAIMLLDIFLNPRATLYFDFIIPVPAILLGIFLIGKDLLRVM 212

Query: 316 EGDT 305
           EG++
Sbjct: 213 EGNS 216


>ref|NP_564058.1| RHOMBOID-like protein 12 [Arabidopsis thaliana]
            gi|9795596|gb|AAF98414.1|AC026238_6 Hypothetical protein
            [Arabidopsis thaliana]
            gi|13877607|gb|AAK43881.1|AF370504_1 Unknown protein
            [Arabidopsis thaliana] gi|20148713|gb|AAM10247.1| unknown
            protein [Arabidopsis thaliana] gi|21592397|gb|AAM64348.1|
            unknown [Arabidopsis thaliana]
            gi|332191612|gb|AEE29733.1| RHOMBOID-like protein 12
            [Arabidopsis thaliana]
          Length = 336

 Score =  226 bits (575), Expect = 1e-56
 Identities = 125/258 (48%), Positives = 165/258 (63%), Gaps = 2/258 (0%)
 Frame = -2

Query: 1072 VSHYSTTSLIKPHNFNGFLSKSLLVNQFLQKSSALFKAPSKGLVDFKWVFSTSYFLQKKX 893
            VS +  + L +     GF + S L N+ ++  +         LV+ +  F  S F +K  
Sbjct: 61   VSRFDPSQLWRSEKIRGFFA-SALGNKAVKLGN---------LVESRVGFIGSQFPKKGF 110

Query: 892  XXXXXXXXXXSQGRRWIQRLDSDNVVLGLILANVAVFLLWRSADYQFMVNNFMISLVNFK 713
                         + W+Q L   +VVLGL++AN  VF++WR  + QFM+NNFMISL NFK
Sbjct: 111  EFQRFSGFQRRGWKHWLQGLSDRDVVLGLVIANAGVFVMWRVFNQQFMMNNFMISLDNFK 170

Query: 712  SGRVHTMITSAFSHIDAGHIISNMIGLYFFGNSIGSAFGPEXXXXXXXXXXXXGSVFYLV 533
            SGR+HT+ITSAFSHID GHI+SNMIGLYFFG SI   FGP+            GSVFYL+
Sbjct: 171  SGRLHTLITSAFSHIDIGHIVSNMIGLYFFGTSIARNFGPQFLLKLYLAGALGGSVFYLI 230

Query: 532  YHAFLIPS--KSNQMWGRSPSSISGLGASGAVNAIMLLDIFLNPKKTIYFQMFIPVPAIL 359
            +HA++  +  K    + R PS   GLGASGAVNAIMLLDIFL+P+ T+Y + FIPVPA+L
Sbjct: 231  HHAYMAATSPKGQGAFVRDPSRTPGLGASGAVNAIMLLDIFLHPRATLYLEFFIPVPAML 290

Query: 358  VGIFIIGKDMLRILEGDT 305
            +GIF+IGKD+LRI EG++
Sbjct: 291  LGIFLIGKDILRITEGNS 308


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