BLASTX nr result

ID: Angelica23_contig00016799 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica23_contig00016799
         (900 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAJ38371.1| HMG-protein [Plantago major]                          105   1e-20
ref|XP_002279947.2| PREDICTED: high mobility group B protein 1-l...   105   2e-20
ref|NP_001238631.1| uncharacterized protein LOC100499704 [Glycin...   104   3e-20
ref|XP_002270185.1| PREDICTED: high mobility group B protein 1 i...   102   2e-19
ref|XP_002269398.1| PREDICTED: high mobility group B protein 1 i...   102   2e-19

>emb|CAJ38371.1| HMG-protein [Plantago major]
          Length = 212

 Score =  105 bits (262), Expect = 1e-20
 Identities = 52/75 (69%), Positives = 57/75 (76%)
 Frame = +2

Query: 377 RPPSAFFVFLEEFRKTFKKENPNVKAVSAVGKAGGEKWKSLSXXXXXXXXXXXXXXXGEY 556
           RPPSAFFVFLEEFR+TFKKENPN+KAVSAVGKAGGEKWKSL+                EY
Sbjct: 101 RPPSAFFVFLEEFRQTFKKENPNIKAVSAVGKAGGEKWKSLTDAEKAPYEAKAAKRKSEY 160

Query: 557 QKLITAYNKKQESIA 601
           +KL+ AYNKKQES A
Sbjct: 161 EKLMNAYNKKQESSA 175


>ref|XP_002279947.2| PREDICTED: high mobility group B protein 1-like [Vitis vinifera]
           gi|147815135|emb|CAN74566.1| hypothetical protein
           VITISV_023651 [Vitis vinifera]
           gi|297740214|emb|CBI30396.3| unnamed protein product
           [Vitis vinifera]
          Length = 168

 Score =  105 bits (261), Expect = 2e-20
 Identities = 52/75 (69%), Positives = 56/75 (74%)
 Frame = +2

Query: 377 RPPSAFFVFLEEFRKTFKKENPNVKAVSAVGKAGGEKWKSLSXXXXXXXXXXXXXXXGEY 556
           RPPSAFFVFLEEFRK FKKENPNVKAVSAVGKAGGE+WKSLS                EY
Sbjct: 58  RPPSAFFVFLEEFRKVFKKENPNVKAVSAVGKAGGERWKSLSEAEKAPYEAKAAKKKAEY 117

Query: 557 QKLITAYNKKQESIA 601
           +K++ AYNKKQES A
Sbjct: 118 EKIMNAYNKKQESTA 132


>ref|NP_001238631.1| uncharacterized protein LOC100499704 [Glycine max]
           gi|255625939|gb|ACU13314.1| unknown [Glycine max]
          Length = 166

 Score =  104 bits (259), Expect = 3e-20
 Identities = 59/116 (50%), Positives = 63/116 (54%)
 Frame = +2

Query: 254 RETLKPVDDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRPPSAFFVFLEEFRKTFKK 433
           +E+LKPVDD                                RPPSAFFVFLEEFRKTFK 
Sbjct: 14  KESLKPVDDRKVGKRKASGKPGRSSAPKKEKKAKKDPNKPKRPPSAFFVFLEEFRKTFKA 73

Query: 434 ENPNVKAVSAVGKAGGEKWKSLSXXXXXXXXXXXXXXXGEYQKLITAYNKKQESIA 601
           ENPNVKAVS VGKAGGEKWKSLS                EY+KLI AY+KKQ S A
Sbjct: 74  ENPNVKAVSVVGKAGGEKWKSLSSAEKAPYESKAAKRKAEYEKLIKAYDKKQASSA 129


>ref|XP_002270185.1| PREDICTED: high mobility group B protein 1 isoform 2 [Vitis
           vinifera]
          Length = 156

 Score =  102 bits (253), Expect = 2e-19
 Identities = 50/75 (66%), Positives = 57/75 (76%)
 Frame = +2

Query: 377 RPPSAFFVFLEEFRKTFKKENPNVKAVSAVGKAGGEKWKSLSXXXXXXXXXXXXXXXGEY 556
           RPPSAFFVFLEEFRK +K+E+PNVKAVSAVGKAGGEKWKSLS                +Y
Sbjct: 58  RPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLSEADKAPYEAKAAKRKSDY 117

Query: 557 QKLITAYNKKQESIA 601
           +KL+ AYNKKQES+A
Sbjct: 118 EKLMAAYNKKQESMA 132


>ref|XP_002269398.1| PREDICTED: high mobility group B protein 1 isoform 1 [Vitis
           vinifera] gi|147854340|emb|CAN83423.1| hypothetical
           protein VITISV_023376 [Vitis vinifera]
          Length = 166

 Score =  102 bits (253), Expect = 2e-19
 Identities = 50/75 (66%), Positives = 57/75 (76%)
 Frame = +2

Query: 377 RPPSAFFVFLEEFRKTFKKENPNVKAVSAVGKAGGEKWKSLSXXXXXXXXXXXXXXXGEY 556
           RPPSAFFVFLEEFRK +K+E+PNVKAVSAVGKAGGEKWKSLS                +Y
Sbjct: 58  RPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLSEADKAPYEAKAAKRKSDY 117

Query: 557 QKLITAYNKKQESIA 601
           +KL+ AYNKKQES+A
Sbjct: 118 EKLMAAYNKKQESMA 132


Top