BLASTX nr result

ID: Angelica23_contig00016688 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica23_contig00016688
         (416 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CCA66040.1| hypothetical protein [Beta vulgaris subsp. vulga...   133   2e-29
dbj|BAF01759.1| putative non-LTR retroelement reverse transcript...   130   1e-28
gb|AAD17398.1| putative non-LTR retroelement reverse transcripta...   130   1e-28
gb|AAB82639.1| putative non-LTR retroelement reverse transcripta...   129   2e-28
gb|EEC80620.1| hypothetical protein OsI_22990 [Oryza sativa Indi...   128   5e-28

>emb|CCA66040.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1362

 Score =  133 bits (334), Expect = 2e-29
 Identities = 70/136 (51%), Positives = 93/136 (68%)
 Frame = +2

Query: 5   NLQLLQPISNEEVKCAVFSMHPEKSPGYDGLNPAFYQVY*SIVEKDVVGFCQNFFNTGEL 184
           N  LL   S +EVK A+F+MHP K+PG DGL+  F+Q +  I+  DV+ F Q+++     
Sbjct: 424 NTALLMLPSGDEVKEALFAMHPNKAPGIDGLHALFFQKFWHILGSDVISFVQSWWRGMGD 483

Query: 185 QEEVNRNVVCLIPKVKQPQ*MADLCPISLCSVLFRVLSKVMANRLKVCLLTLISVNQSAF 364
              VN+  + LIPK   PQ M D  PISLC+VL+++LSK +ANRLKV L  +IS NQSAF
Sbjct: 484 LGVVNKTCIVLIPKCDHPQSMKDFRPISLCTVLYKILSKTLANRLKVILPAIISPNQSAF 543

Query: 365 VEGRLLTDNALIAFEV 412
           V  RL+TDNAL+AFE+
Sbjct: 544 VPRRLITDNALVAFEI 559


>dbj|BAF01759.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
           thaliana]
          Length = 400

 Score =  130 bits (326), Expect = 1e-28
 Identities = 68/135 (50%), Positives = 93/135 (68%)
 Frame = +2

Query: 5   NLQLLQPISNEEVKCAVFSMHPEKSPGYDGLNPAFYQVY*SIVEKDVVGFCQNFFNTGEL 184
           N  L + IS EEVK A+FS++P+K+PG DG+   FYQ Y  +   D++   QNF +TG  
Sbjct: 2   NKSLTKVISPEEVKRALFSLNPDKAPGPDGMTAFFYQHYWDLTGPDLIKLVQNFHSTGFF 61

Query: 185 QEEVNRNVVCLIPKVKQPQ*MADLCPISLCSVLFRVLSKVMANRLKVCLLTLISVNQSAF 364
            E +N   +CLIPK ++P+ MA+  PISLC+V ++V+SKV+++RLK  L  LIS  QSAF
Sbjct: 62  DERLNETNICLIPKTERPRKMAEFRPISLCNVSYKVISKVLSSRLKRLLPELISETQSAF 121

Query: 365 VEGRLLTDNALIAFE 409
           V  RL+TDN LIA E
Sbjct: 122 VAERLITDNILIAQE 136


>gb|AAD17398.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
           thaliana]
          Length = 1225

 Score =  130 bits (326), Expect = 1e-28
 Identities = 68/135 (50%), Positives = 93/135 (68%)
 Frame = +2

Query: 5   NLQLLQPISNEEVKCAVFSMHPEKSPGYDGLNPAFYQVY*SIVEKDVVGFCQNFFNTGEL 184
           N  L + IS EEVK A+FS++P+K+PG DG+   FYQ Y  +   D++   QNF +TG  
Sbjct: 368 NKSLTKVISPEEVKRALFSLNPDKAPGPDGMTAFFYQHYWDLTGPDLIKLVQNFHSTGFF 427

Query: 185 QEEVNRNVVCLIPKVKQPQ*MADLCPISLCSVLFRVLSKVMANRLKVCLLTLISVNQSAF 364
            E +N   +CLIPK ++P+ MA+  PISLC+V ++V+SKV+++RLK  L  LIS  QSAF
Sbjct: 428 DERLNETNICLIPKTERPRKMAEFRPISLCNVSYKVISKVLSSRLKRLLPELISETQSAF 487

Query: 365 VEGRLLTDNALIAFE 409
           V  RL+TDN LIA E
Sbjct: 488 VAERLITDNILIAQE 502


>gb|AAB82639.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
           thaliana]
          Length = 1374

 Score =  129 bits (324), Expect = 2e-28
 Identities = 64/136 (47%), Positives = 93/136 (68%)
 Frame = +2

Query: 5   NLQLLQPISNEEVKCAVFSMHPEKSPGYDGLNPAFYQVY*SIVEKDVVGFCQNFFNTGEL 184
           N  LL PI+ EEV+ A FS++P K PG DG+N   YQ +   +   +    Q FF +G +
Sbjct: 421 NNNLLAPITKEEVQRATFSINPHKCPGPDGMNGFLYQQFWETMGDQITEMVQAFFRSGSI 480

Query: 185 QEEVNRNVVCLIPKVKQPQ*MADLCPISLCSVLFRVLSKVMANRLKVCLLTLISVNQSAF 364
           +E +N+  +CLIPK+ + + M D  PISLC+V+++V+ K+MANRLK  L +LIS  Q+AF
Sbjct: 481 EEGMNKTNICLIPKILKAEKMTDFRPISLCNVIYKVIGKLMANRLKKILPSLISETQAAF 540

Query: 365 VEGRLLTDNALIAFEV 412
           V+GRL++DN LIA E+
Sbjct: 541 VKGRLISDNILIAHEL 556


>gb|EEC80620.1| hypothetical protein OsI_22990 [Oryza sativa Indica Group]
          Length = 492

 Score =  128 bits (321), Expect = 5e-28
 Identities = 64/135 (47%), Positives = 91/135 (67%)
 Frame = +2

Query: 5   NLQLLQPISNEEVKCAVFSMHPEKSPGYDGLNPAFYQVY*SIVEKDVVGFCQNFFNTGEL 184
           N +L    ++EE+  AVF + P K+PG DG    FYQ    IV++D++   + FF+TG +
Sbjct: 37  NDKLCVGFTDEEIAMAVFQIGPLKAPGPDGFPARFYQCNWDIVKQDIMAAVRRFFHTGSM 96

Query: 185 QEEVNRNVVCLIPKVKQPQ*MADLCPISLCSVLFRVLSKVMANRLKVCLLTLISVNQSAF 364
              VN   + LIPK+ QP  + D  PISLC+V+++V+SK + NRL++CL  L+S  QSAF
Sbjct: 97  PSGVNETAIVLIPKIDQPVGLKDFRPISLCNVVYKVVSKCLVNRLRLCLDDLVSDEQSAF 156

Query: 365 VEGRLLTDNALIAFE 409
           V GRL+TDNAL+AFE
Sbjct: 157 VPGRLITDNALLAFE 171


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