BLASTX nr result

ID: Angelica23_contig00016608 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica23_contig00016608
         (261 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004133873.1| PREDICTED: cleavage and polyadenylation spec...    55   5e-06
ref|XP_002510802.1| pre-mRNA cleavage factor im, 25kD subunit, p...    55   5e-06
ref|XP_002321911.1| predicted protein [Populus trichocarpa] gi|1...    55   5e-06
ref|XP_002269748.1| PREDICTED: cleavage and polyadenylation spec...    55   5e-06

>ref|XP_004133873.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
           5-like [Cucumis sativus]
           gi|449480168|ref|XP_004155818.1| PREDICTED: cleavage and
           polyadenylation specificity factor subunit 5-like
           [Cucumis sativus]
          Length = 200

 Score = 55.5 bits (132), Expect = 5e-06
 Identities = 26/30 (86%), Positives = 28/30 (93%)
 Frame = -2

Query: 260 ELYDNVQRYGPVISTIP*QLSRFQFSMMQT 171
           ELYDNVQRYGPVISTIP QLSRFQF+M+ T
Sbjct: 171 ELYDNVQRYGPVISTIPQQLSRFQFNMITT 200


>ref|XP_002510802.1| pre-mRNA cleavage factor im, 25kD subunit, putative [Ricinus
           communis] gi|223549917|gb|EEF51404.1| pre-mRNA cleavage
           factor im, 25kD subunit, putative [Ricinus communis]
          Length = 200

 Score = 55.5 bits (132), Expect = 5e-06
 Identities = 26/30 (86%), Positives = 28/30 (93%)
 Frame = -2

Query: 260 ELYDNVQRYGPVISTIP*QLSRFQFSMMQT 171
           ELYDNVQRYGPVISTIP QLSRFQF+M+ T
Sbjct: 171 ELYDNVQRYGPVISTIPQQLSRFQFNMITT 200


>ref|XP_002321911.1| predicted protein [Populus trichocarpa] gi|118487488|gb|ABK95571.1|
           unknown [Populus trichocarpa]
           gi|222868907|gb|EEF06038.1| predicted protein [Populus
           trichocarpa]
          Length = 202

 Score = 55.5 bits (132), Expect = 5e-06
 Identities = 26/30 (86%), Positives = 28/30 (93%)
 Frame = -2

Query: 260 ELYDNVQRYGPVISTIP*QLSRFQFSMMQT 171
           ELYDNVQRYGPVISTIP QLSRFQF+M+ T
Sbjct: 173 ELYDNVQRYGPVISTIPQQLSRFQFNMITT 202


>ref|XP_002269748.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
           5 isoform 1 [Vitis vinifera]
           gi|297745235|emb|CBI40315.3| unnamed protein product
           [Vitis vinifera]
          Length = 200

 Score = 55.5 bits (132), Expect = 5e-06
 Identities = 26/28 (92%), Positives = 27/28 (96%)
 Frame = -2

Query: 260 ELYDNVQRYGPVISTIP*QLSRFQFSMM 177
           ELYDNVQRYGPVISTIP QLSRFQF+MM
Sbjct: 171 ELYDNVQRYGPVISTIPQQLSRFQFNMM 198


Top