BLASTX nr result
ID: Angelica23_contig00016564
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Angelica23_contig00016564 (655 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002277625.2| PREDICTED: probable ATP-dependent RNA helica... 195 7e-48 gb|AAG60124.1|AC073555_8 hypothetical protein [Arabidopsis thali... 182 4e-44 ref|NP_175298.2| DEA(D/H)-box RNA helicase family protein [Arabi... 182 4e-44 ref|NP_001154411.1| DEA(D/H)-box RNA helicase family protein [Ar... 182 4e-44 ref|XP_002894123.1| helicase domain-containing protein [Arabidop... 179 5e-43 >ref|XP_002277625.2| PREDICTED: probable ATP-dependent RNA helicase DHX36-like [Vitis vinifera] Length = 1178 Score = 195 bits (495), Expect = 7e-48 Identities = 96/140 (68%), Positives = 122/140 (87%), Gaps = 2/140 (1%) Frame = -2 Query: 414 KNLSSNYLYKQSFGYGRYAYDEYDSEHDSDRDVKSSKQ--LGASTLDNVEEWKWKLSMLI 241 +N++ YL+ Q+ YGR+AYD++ SE+DSDR+V+S++Q + AST +N++EWKWKL+MLI Sbjct: 66 RNVALPYLFHQNSRYGRFAYDDF-SEYDSDREVESAQQQQMRASTHENIDEWKWKLTMLI 124 Query: 240 RNKDEQEVVSREKKDRRDFQQISALAARMGLCSQQYSKVVVISKVPLPNYRSDLDDRRPQ 61 RNKDEQEVVS EKKDRRDF+QISALA RMGL S QYS+VVV SKVPLPNYRSDLDD+RPQ Sbjct: 125 RNKDEQEVVSTEKKDRRDFEQISALATRMGLYSCQYSRVVVFSKVPLPNYRSDLDDKRPQ 184 Query: 60 REVILPYGLEEELVAQLKKY 1 REV+LP+GL+ E+ A LK+Y Sbjct: 185 REVVLPFGLQREVHAHLKEY 204 >gb|AAG60124.1|AC073555_8 hypothetical protein [Arabidopsis thaliana] Length = 1167 Score = 182 bits (463), Expect = 4e-44 Identities = 87/147 (59%), Positives = 118/147 (80%), Gaps = 2/147 (1%) Frame = -2 Query: 435 SSTPFQFKNLSSNYLYKQSFGYGRYAYDEYDSEHDSDRDVKSSK--QLGASTLDNVEEWK 262 S+ +++ + Y +Q+ GYGR AY++Y+S +SDRDV SS+ Q+ STLDN+++W+ Sbjct: 49 STLGIEWRAANLPYFQRQNSGYGRIAYNDYESSDESDRDVGSSQSQQMAGSTLDNIDQWR 108 Query: 261 WKLSMLIRNKDEQEVVSREKKDRRDFQQISALAARMGLCSQQYSKVVVISKVPLPNYRSD 82 +KL+ML+RNK++QEVVSRE+KDRRDF ISALA RMGL S+QYSK+VVISK PLPNYR D Sbjct: 109 FKLTMLLRNKEDQEVVSRERKDRRDFDHISALATRMGLHSRQYSKIVVISKAPLPNYRPD 168 Query: 81 LDDRRPQREVILPYGLEEELVAQLKKY 1 LDD+RPQREV+LP+GL+ E+ A L + Sbjct: 169 LDDKRPQREVVLPFGLQSEVDAHLHSF 195 >ref|NP_175298.2| DEA(D/H)-box RNA helicase family protein [Arabidopsis thaliana] gi|332194212|gb|AEE32333.1| DEA(D/H)-box RNA helicase family protein [Arabidopsis thaliana] Length = 1197 Score = 182 bits (463), Expect = 4e-44 Identities = 87/147 (59%), Positives = 118/147 (80%), Gaps = 2/147 (1%) Frame = -2 Query: 435 SSTPFQFKNLSSNYLYKQSFGYGRYAYDEYDSEHDSDRDVKSSK--QLGASTLDNVEEWK 262 S+ +++ + Y +Q+ GYGR AY++Y+S +SDRDV SS+ Q+ STLDN+++W+ Sbjct: 79 STLGIEWRAANLPYFQRQNSGYGRIAYNDYESSDESDRDVGSSQSQQMAGSTLDNIDQWR 138 Query: 261 WKLSMLIRNKDEQEVVSREKKDRRDFQQISALAARMGLCSQQYSKVVVISKVPLPNYRSD 82 +KL+ML+RNK++QEVVSRE+KDRRDF ISALA RMGL S+QYSK+VVISK PLPNYR D Sbjct: 139 FKLTMLLRNKEDQEVVSRERKDRRDFDHISALATRMGLHSRQYSKIVVISKAPLPNYRPD 198 Query: 81 LDDRRPQREVILPYGLEEELVAQLKKY 1 LDD+RPQREV+LP+GL+ E+ A L + Sbjct: 199 LDDKRPQREVVLPFGLQSEVDAHLHSF 225 >ref|NP_001154411.1| DEA(D/H)-box RNA helicase family protein [Arabidopsis thaliana] gi|332194213|gb|AEE32334.1| DEA(D/H)-box RNA helicase family protein [Arabidopsis thaliana] Length = 1206 Score = 182 bits (463), Expect = 4e-44 Identities = 87/147 (59%), Positives = 118/147 (80%), Gaps = 2/147 (1%) Frame = -2 Query: 435 SSTPFQFKNLSSNYLYKQSFGYGRYAYDEYDSEHDSDRDVKSSK--QLGASTLDNVEEWK 262 S+ +++ + Y +Q+ GYGR AY++Y+S +SDRDV SS+ Q+ STLDN+++W+ Sbjct: 79 STLGIEWRAANLPYFQRQNSGYGRIAYNDYESSDESDRDVGSSQSQQMAGSTLDNIDQWR 138 Query: 261 WKLSMLIRNKDEQEVVSREKKDRRDFQQISALAARMGLCSQQYSKVVVISKVPLPNYRSD 82 +KL+ML+RNK++QEVVSRE+KDRRDF ISALA RMGL S+QYSK+VVISK PLPNYR D Sbjct: 139 FKLTMLLRNKEDQEVVSRERKDRRDFDHISALATRMGLHSRQYSKIVVISKAPLPNYRPD 198 Query: 81 LDDRRPQREVILPYGLEEELVAQLKKY 1 LDD+RPQREV+LP+GL+ E+ A L + Sbjct: 199 LDDKRPQREVVLPFGLQSEVDAHLHSF 225 >ref|XP_002894123.1| helicase domain-containing protein [Arabidopsis lyrata subsp. lyrata] gi|297339965|gb|EFH70382.1| helicase domain-containing protein [Arabidopsis lyrata subsp. lyrata] Length = 1197 Score = 179 bits (453), Expect = 5e-43 Identities = 85/147 (57%), Positives = 116/147 (78%), Gaps = 2/147 (1%) Frame = -2 Query: 435 SSTPFQFKNLSSNYLYKQSFGYGRYAYDEYDSEHDSDRDVKSSK--QLGASTLDNVEEWK 262 S+ +++ + Y +Q+ GYGR AY++Y+S +SDRDV SS+ Q+ STLDN+++W+ Sbjct: 79 STLGLEWRAANLPYFQRQNSGYGRIAYNDYESSDESDRDVGSSQSQQMAGSTLDNIDQWR 138 Query: 261 WKLSMLIRNKDEQEVVSREKKDRRDFQQISALAARMGLCSQQYSKVVVISKVPLPNYRSD 82 KL+ML+RNK++QEVVSRE+KDRRDF ISA+A RMGL S+QYSK+VVISK PLPNYR D Sbjct: 139 LKLTMLLRNKEDQEVVSRERKDRRDFDHISAMATRMGLHSRQYSKIVVISKAPLPNYRPD 198 Query: 81 LDDRRPQREVILPYGLEEELVAQLKKY 1 LDD+RPQREV+LP+GL+ E+ L + Sbjct: 199 LDDKRPQREVVLPFGLQSEVDTHLHAF 225