BLASTX nr result

ID: Angelica23_contig00016564 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica23_contig00016564
         (655 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002277625.2| PREDICTED: probable ATP-dependent RNA helica...   195   7e-48
gb|AAG60124.1|AC073555_8 hypothetical protein [Arabidopsis thali...   182   4e-44
ref|NP_175298.2| DEA(D/H)-box RNA helicase family protein [Arabi...   182   4e-44
ref|NP_001154411.1| DEA(D/H)-box RNA helicase family protein [Ar...   182   4e-44
ref|XP_002894123.1| helicase domain-containing protein [Arabidop...   179   5e-43

>ref|XP_002277625.2| PREDICTED: probable ATP-dependent RNA helicase DHX36-like [Vitis
           vinifera]
          Length = 1178

 Score =  195 bits (495), Expect = 7e-48
 Identities = 96/140 (68%), Positives = 122/140 (87%), Gaps = 2/140 (1%)
 Frame = -2

Query: 414 KNLSSNYLYKQSFGYGRYAYDEYDSEHDSDRDVKSSKQ--LGASTLDNVEEWKWKLSMLI 241
           +N++  YL+ Q+  YGR+AYD++ SE+DSDR+V+S++Q  + AST +N++EWKWKL+MLI
Sbjct: 66  RNVALPYLFHQNSRYGRFAYDDF-SEYDSDREVESAQQQQMRASTHENIDEWKWKLTMLI 124

Query: 240 RNKDEQEVVSREKKDRRDFQQISALAARMGLCSQQYSKVVVISKVPLPNYRSDLDDRRPQ 61
           RNKDEQEVVS EKKDRRDF+QISALA RMGL S QYS+VVV SKVPLPNYRSDLDD+RPQ
Sbjct: 125 RNKDEQEVVSTEKKDRRDFEQISALATRMGLYSCQYSRVVVFSKVPLPNYRSDLDDKRPQ 184

Query: 60  REVILPYGLEEELVAQLKKY 1
           REV+LP+GL+ E+ A LK+Y
Sbjct: 185 REVVLPFGLQREVHAHLKEY 204


>gb|AAG60124.1|AC073555_8 hypothetical protein [Arabidopsis thaliana]
          Length = 1167

 Score =  182 bits (463), Expect = 4e-44
 Identities = 87/147 (59%), Positives = 118/147 (80%), Gaps = 2/147 (1%)
 Frame = -2

Query: 435 SSTPFQFKNLSSNYLYKQSFGYGRYAYDEYDSEHDSDRDVKSSK--QLGASTLDNVEEWK 262
           S+   +++  +  Y  +Q+ GYGR AY++Y+S  +SDRDV SS+  Q+  STLDN+++W+
Sbjct: 49  STLGIEWRAANLPYFQRQNSGYGRIAYNDYESSDESDRDVGSSQSQQMAGSTLDNIDQWR 108

Query: 261 WKLSMLIRNKDEQEVVSREKKDRRDFQQISALAARMGLCSQQYSKVVVISKVPLPNYRSD 82
           +KL+ML+RNK++QEVVSRE+KDRRDF  ISALA RMGL S+QYSK+VVISK PLPNYR D
Sbjct: 109 FKLTMLLRNKEDQEVVSRERKDRRDFDHISALATRMGLHSRQYSKIVVISKAPLPNYRPD 168

Query: 81  LDDRRPQREVILPYGLEEELVAQLKKY 1
           LDD+RPQREV+LP+GL+ E+ A L  +
Sbjct: 169 LDDKRPQREVVLPFGLQSEVDAHLHSF 195


>ref|NP_175298.2| DEA(D/H)-box RNA helicase family protein [Arabidopsis thaliana]
           gi|332194212|gb|AEE32333.1| DEA(D/H)-box RNA helicase
           family protein [Arabidopsis thaliana]
          Length = 1197

 Score =  182 bits (463), Expect = 4e-44
 Identities = 87/147 (59%), Positives = 118/147 (80%), Gaps = 2/147 (1%)
 Frame = -2

Query: 435 SSTPFQFKNLSSNYLYKQSFGYGRYAYDEYDSEHDSDRDVKSSK--QLGASTLDNVEEWK 262
           S+   +++  +  Y  +Q+ GYGR AY++Y+S  +SDRDV SS+  Q+  STLDN+++W+
Sbjct: 79  STLGIEWRAANLPYFQRQNSGYGRIAYNDYESSDESDRDVGSSQSQQMAGSTLDNIDQWR 138

Query: 261 WKLSMLIRNKDEQEVVSREKKDRRDFQQISALAARMGLCSQQYSKVVVISKVPLPNYRSD 82
           +KL+ML+RNK++QEVVSRE+KDRRDF  ISALA RMGL S+QYSK+VVISK PLPNYR D
Sbjct: 139 FKLTMLLRNKEDQEVVSRERKDRRDFDHISALATRMGLHSRQYSKIVVISKAPLPNYRPD 198

Query: 81  LDDRRPQREVILPYGLEEELVAQLKKY 1
           LDD+RPQREV+LP+GL+ E+ A L  +
Sbjct: 199 LDDKRPQREVVLPFGLQSEVDAHLHSF 225


>ref|NP_001154411.1| DEA(D/H)-box RNA helicase family protein [Arabidopsis thaliana]
           gi|332194213|gb|AEE32334.1| DEA(D/H)-box RNA helicase
           family protein [Arabidopsis thaliana]
          Length = 1206

 Score =  182 bits (463), Expect = 4e-44
 Identities = 87/147 (59%), Positives = 118/147 (80%), Gaps = 2/147 (1%)
 Frame = -2

Query: 435 SSTPFQFKNLSSNYLYKQSFGYGRYAYDEYDSEHDSDRDVKSSK--QLGASTLDNVEEWK 262
           S+   +++  +  Y  +Q+ GYGR AY++Y+S  +SDRDV SS+  Q+  STLDN+++W+
Sbjct: 79  STLGIEWRAANLPYFQRQNSGYGRIAYNDYESSDESDRDVGSSQSQQMAGSTLDNIDQWR 138

Query: 261 WKLSMLIRNKDEQEVVSREKKDRRDFQQISALAARMGLCSQQYSKVVVISKVPLPNYRSD 82
           +KL+ML+RNK++QEVVSRE+KDRRDF  ISALA RMGL S+QYSK+VVISK PLPNYR D
Sbjct: 139 FKLTMLLRNKEDQEVVSRERKDRRDFDHISALATRMGLHSRQYSKIVVISKAPLPNYRPD 198

Query: 81  LDDRRPQREVILPYGLEEELVAQLKKY 1
           LDD+RPQREV+LP+GL+ E+ A L  +
Sbjct: 199 LDDKRPQREVVLPFGLQSEVDAHLHSF 225


>ref|XP_002894123.1| helicase domain-containing protein [Arabidopsis lyrata subsp.
           lyrata] gi|297339965|gb|EFH70382.1| helicase
           domain-containing protein [Arabidopsis lyrata subsp.
           lyrata]
          Length = 1197

 Score =  179 bits (453), Expect = 5e-43
 Identities = 85/147 (57%), Positives = 116/147 (78%), Gaps = 2/147 (1%)
 Frame = -2

Query: 435 SSTPFQFKNLSSNYLYKQSFGYGRYAYDEYDSEHDSDRDVKSSK--QLGASTLDNVEEWK 262
           S+   +++  +  Y  +Q+ GYGR AY++Y+S  +SDRDV SS+  Q+  STLDN+++W+
Sbjct: 79  STLGLEWRAANLPYFQRQNSGYGRIAYNDYESSDESDRDVGSSQSQQMAGSTLDNIDQWR 138

Query: 261 WKLSMLIRNKDEQEVVSREKKDRRDFQQISALAARMGLCSQQYSKVVVISKVPLPNYRSD 82
            KL+ML+RNK++QEVVSRE+KDRRDF  ISA+A RMGL S+QYSK+VVISK PLPNYR D
Sbjct: 139 LKLTMLLRNKEDQEVVSRERKDRRDFDHISAMATRMGLHSRQYSKIVVISKAPLPNYRPD 198

Query: 81  LDDRRPQREVILPYGLEEELVAQLKKY 1
           LDD+RPQREV+LP+GL+ E+   L  +
Sbjct: 199 LDDKRPQREVVLPFGLQSEVDTHLHAF 225


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