BLASTX nr result

ID: Angelica23_contig00016401 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica23_contig00016401
         (890 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI19025.3| unnamed protein product [Vitis vinifera]              261   2e-67
gb|ACD56616.1| hypothetical protein [Gossypioides kirkii]             216   6e-54
ref|XP_002284482.2| PREDICTED: sister chromatid cohesion protein...   189   1e-45
ref|NP_001185421.1| sister chromatid cohesion protein PDS5 [Arab...   189   1e-45
ref|NP_001185420.1| sister chromatid cohesion protein PDS5 [Arab...   189   1e-45

>emb|CBI19025.3| unnamed protein product [Vitis vinifera]
          Length = 1450

 Score =  261 bits (667), Expect = 2e-67
 Identities = 140/277 (50%), Positives = 183/277 (66%), Gaps = 8/277 (2%)
 Frame = -3

Query: 888  SPSVFRLTVSMAKDPSSLIRRSFVDKTFKLLKEHVIPCRYACAFALAVSCSDEDMQKDSL 709
            SP +FR T+ +AKDPS LIRR F+DKT KLLKEH IP RYACAFA A     +D+Q+DSL
Sbjct: 869  SPHIFRSTILVAKDPSPLIRRLFLDKTHKLLKEHAIPSRYACAFAFAGPDCPKDLQEDSL 928

Query: 708  RYMAEYIREYSKGAQLRQKLPCQGG-LTDYPVYIVVFLIHVLAHDDLFPLEECENGEVFA 532
            +YMAE+++EY K AQ+RQ    QGG +TDYP Y+VVFL+HVLAHD  FP E C++ E+FA
Sbjct: 929  KYMAEFMKEYRKEAQVRQTSVMQGGTITDYPAYMVVFLVHVLAHDTNFPSETCQDEEMFA 988

Query: 531  QFCSPLLFTLKALVNAKFVDGDQDLVNNVVSNLKSIFNAIKRAEDAVDSQATPKLHMLAN 352
            QFCSPL F L+ LVNA FVDG  DL N+ +S + SIF AIKRA+DAVD+Q T  LHMLA+
Sbjct: 989  QFCSPLFFALQVLVNASFVDGGMDLDNDAISCIFSIFRAIKRADDAVDAQRTLNLHMLAD 1048

Query: 351  FGLSFANTLGNTSSPNSQSPSHVLLPSSLYKNRTSEK------RKALSNASDRNISTKVL 190
             G+S    L       S +P  +LLPSSLY+  +++K       + + +  D     K++
Sbjct: 1049 IGISILKALNTWGISMSNTPDKILLPSSLYRISSAKKSEEVDSTRLIGSTFDEKFLKKLI 1108

Query: 189  NEFR-EFSCPVRTIGNDGRSQENSSESDVIKGSLSNM 82
              F+   S P       GR  ++SS  D+IK +  N+
Sbjct: 1109 PIFKSNLSLPSTAHPKRGRKCQDSSHLDIIKSNTLNL 1145


>gb|ACD56616.1| hypothetical protein [Gossypioides kirkii]
          Length = 262

 Score =  216 bits (550), Expect = 6e-54
 Identities = 115/222 (51%), Positives = 147/222 (66%), Gaps = 1/222 (0%)
 Frame = -3

Query: 888 SPSVFRLTVSMAKDPSSLIRRSFVDKTFKLLKEHVIPCRYACAFALAVSCSDEDMQKDSL 709
           SP +FR T+ M KD SS +R SF+DKTFKLLKE VIP RYACAF LA +   +D Q  S 
Sbjct: 41  SPDIFRSTILMGKDDSSSVRLSFLDKTFKLLKERVIPIRYACAFTLATAIGFKDRQH-SF 99

Query: 708 RYMAEYIREYSKGAQLRQKLPCQGG-LTDYPVYIVVFLIHVLAHDDLFPLEECENGEVFA 532
           +YM E+I+EY++ AQ+R+    QGG + DYP Y+ VFLIH+LAHDD FP E C++   +A
Sbjct: 100 KYMVEFIKEYNREAQIRRTSMVQGGSIVDYPAYLAVFLIHLLAHDDGFPPEGCQDEARYA 159

Query: 531 QFCSPLLFTLKALVNAKFVDGDQDLVNNVVSNLKSIFNAIKRAEDAVDSQATPKLHMLAN 352
           QFCSPLLF L   +++  VD D D+VN     L  IF AIKRA+DAVD Q TP+LH LA+
Sbjct: 160 QFCSPLLFFLHTSISSNNVDDDMDIVNVAAFYLYYIFRAIKRAKDAVDVQRTPRLHFLAD 219

Query: 351 FGLSFANTLGNTSSPNSQSPSHVLLPSSLYKNRTSEKRKALS 226
            G+S  N+       +   P  +LLPSSLYK    +  +A S
Sbjct: 220 VGISGVNSFYQKGISSLPRPEKILLPSSLYKITPMKNEEARS 261


>ref|XP_002284482.2| PREDICTED: sister chromatid cohesion protein PDS5 homolog A-like
            [Vitis vinifera]
          Length = 1305

 Score =  189 bits (479), Expect = 1e-45
 Identities = 103/219 (47%), Positives = 139/219 (63%), Gaps = 8/219 (3%)
 Frame = -3

Query: 714  SLRYMAEYIREYSKGAQLRQKLPCQGG-LTDYPVYIVVFLIHVLAHDDLFPLEECENGEV 538
            SL+YMAE+++EY K AQ+RQ    QGG +TDYP Y+VVFL+HVLAHD  FP E C++ E+
Sbjct: 859  SLKYMAEFMKEYRKEAQVRQTSVMQGGTITDYPAYMVVFLVHVLAHDTNFPSETCQDEEM 918

Query: 537  FAQFCSPLLFTLKALVNAKFVDGDQDLVNNVVSNLKSIFNAIKRAEDAVDSQATPKLHML 358
            FAQFCSPL F L+ LVNA FVDG  DL N+ +S + SIF AIKRA+DAVD+Q T  LHML
Sbjct: 919  FAQFCSPLFFALQVLVNASFVDGGMDLDNDAISCIFSIFRAIKRADDAVDAQRTLNLHML 978

Query: 357  ANFGLSFANTLGNTSSPNSQSPSHVLLPSSLYKNRTSEK------RKALSNASDRNISTK 196
            A+ G+S    L       S +P  +LLPSSLY+  +++K       + + +  D     K
Sbjct: 979  ADIGISILKALNTWGISMSNTPDKILLPSSLYRISSAKKSEEVDSTRLIGSTFDEKFLKK 1038

Query: 195  VLNEFR-EFSCPVRTIGNDGRSQENSSESDVIKGSLSNM 82
            ++  F+   S P       GR  ++SS  D+IK +  N+
Sbjct: 1039 LIPIFKSNLSLPSTAHPKRGRKCQDSSHLDIIKSNTLNL 1077


>ref|NP_001185421.1| sister chromatid cohesion protein PDS5 [Arabidopsis thaliana]
            gi|332197878|gb|AEE35999.1| sister chromatid cohesion
            protein PDS5 [Arabidopsis thaliana]
          Length = 1424

 Score =  189 bits (479), Expect = 1e-45
 Identities = 111/277 (40%), Positives = 167/277 (60%), Gaps = 9/277 (3%)
 Frame = -3

Query: 888  SPSVFRLTVSMAKDPSSLIRRSFVDKTFKLLKEHVIPCRYACAFALAVSCSDEDMQKDSL 709
            SP VFRLT+ MAKD ++ I ++F+ K +KLL EH+IP RYACAF+ ++S    D+  DS 
Sbjct: 913  SPEVFRLTILMAKDSNAFITKTFLTKLYKLLTEHMIPSRYACAFSFSLSSPCRDLHDDSF 972

Query: 708  RYMAEYIREYSKGAQLRQKLPCQGGLTDYPVYIVVFLIHVLAHDDLFPLEECENGEVFAQ 529
            RY+  +I + ++ ++  + L     LTD PVY+ VFLIHVLAHD  FP E+C +  ++A+
Sbjct: 973  RYINGFINKATRESRTCRDLDQGESLTDSPVYMTVFLIHVLAHDPEFPSEDCRDEHIYAR 1032

Query: 528  FCSPLLFTLKALVNAKFVDGDQDLVNNVVSNLKSIFNAIKRAEDAVDSQATPKLHMLANF 349
            FC PL   L+ L++   ++ +   +      L  IF AIKRAEDAVDS+ TP+LH+LA+ 
Sbjct: 1033 FCGPLFSVLQVLLS---INNNGFTIKETAPFLFCIFRAIKRAEDAVDSRKTPRLHILADI 1089

Query: 348  GLSFANTLGNTSSPNSQSPSHVLLPSSLYK--NRTSEKRKALS---NASDRNISTKVLNE 184
            G S  N L +    + Q+P  +LLPSSLY   + T  + KA S   NA +++   ++++ 
Sbjct: 1090 GYSAVNILNSIVVTSPQAPRSILLPSSLYSLTSITDNQNKAKSRTRNALEQSFIERIVHI 1149

Query: 183  FREFSCPVRTIGNDGRSQENS----SESDVIKGSLSN 85
            F+      +   +D R Q++S    SE  V+   L N
Sbjct: 1150 FQS-----QISMHDQRCQKDSLAVGSEDKVLPPLLGN 1181


>ref|NP_001185420.1| sister chromatid cohesion protein PDS5 [Arabidopsis thaliana]
            gi|332197877|gb|AEE35998.1| sister chromatid cohesion
            protein PDS5 [Arabidopsis thaliana]
          Length = 1410

 Score =  189 bits (479), Expect = 1e-45
 Identities = 111/277 (40%), Positives = 167/277 (60%), Gaps = 9/277 (3%)
 Frame = -3

Query: 888  SPSVFRLTVSMAKDPSSLIRRSFVDKTFKLLKEHVIPCRYACAFALAVSCSDEDMQKDSL 709
            SP VFRLT+ MAKD ++ I ++F+ K +KLL EH+IP RYACAF+ ++S    D+  DS 
Sbjct: 899  SPEVFRLTILMAKDSNAFITKTFLTKLYKLLTEHMIPSRYACAFSFSLSSPCRDLHDDSF 958

Query: 708  RYMAEYIREYSKGAQLRQKLPCQGGLTDYPVYIVVFLIHVLAHDDLFPLEECENGEVFAQ 529
            RY+  +I + ++ ++  + L     LTD PVY+ VFLIHVLAHD  FP E+C +  ++A+
Sbjct: 959  RYINGFINKATRESRTCRDLDQGESLTDSPVYMTVFLIHVLAHDPEFPSEDCRDEHIYAR 1018

Query: 528  FCSPLLFTLKALVNAKFVDGDQDLVNNVVSNLKSIFNAIKRAEDAVDSQATPKLHMLANF 349
            FC PL   L+ L++   ++ +   +      L  IF AIKRAEDAVDS+ TP+LH+LA+ 
Sbjct: 1019 FCGPLFSVLQVLLS---INNNGFTIKETAPFLFCIFRAIKRAEDAVDSRKTPRLHILADI 1075

Query: 348  GLSFANTLGNTSSPNSQSPSHVLLPSSLYK--NRTSEKRKALS---NASDRNISTKVLNE 184
            G S  N L +    + Q+P  +LLPSSLY   + T  + KA S   NA +++   ++++ 
Sbjct: 1076 GYSAVNILNSIVVTSPQAPRSILLPSSLYSLTSITDNQNKAKSRTRNALEQSFIERIVHI 1135

Query: 183  FREFSCPVRTIGNDGRSQENS----SESDVIKGSLSN 85
            F+      +   +D R Q++S    SE  V+   L N
Sbjct: 1136 FQS-----QISMHDQRCQKDSLAVGSEDKVLPPLLGN 1167


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