BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica23_contig00016213
         (922 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002276540.1| PREDICTED: pentatricopeptide repeat-containi...   377   e-102
ref|XP_002532046.1| pentatricopeptide repeat-containing protein,...   372   e-101
ref|XP_004169853.1| PREDICTED: pentatricopeptide repeat-containi...   369   e-100
ref|XP_004143565.1| PREDICTED: pentatricopeptide repeat-containi...   369   e-100
ref|XP_003524280.1| PREDICTED: pentatricopeptide repeat-containi...   363   3e-98

>ref|XP_002276540.1| PREDICTED: pentatricopeptide repeat-containing protein At4g39620,
           chloroplastic [Vitis vinifera]
           gi|296082481|emb|CBI21486.3| unnamed protein product
           [Vitis vinifera]
          Length = 489

 Score =  377 bits (969), Expect = e-102
 Identities = 187/247 (75%), Positives = 216/247 (87%)
 Frame = +2

Query: 2   VDQVEALFKDLKDSVITPDIFTFNGMMDAYGKNGMIREMELLLTRMKSNQLKPDIITFNL 181
           V+Q  ALFK+L +S+++PDIFTFNG+MDAYGKNGMI+EME +L+RMKSNQ KPDIITFN+
Sbjct: 225 VNQANALFKELNESIVSPDIFTFNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNV 284

Query: 182 LIDSYGRKQEFEKMEQVFKSLLRSKERPTLPTFNSMITNYGKARLREKSELVYQKMTDMK 361
           LIDSYGR+QEF+KMEQVFKSLLRSKE+PTLPTFNSMITNYGKARL+EK+E V++KMTDM 
Sbjct: 285 LIDSYGRRQEFDKMEQVFKSLLRSKEKPTLPTFNSMITNYGKARLKEKAENVFKKMTDMG 344

Query: 362 YTPNFITKECLIIMYGYCDCVSKAREIYDGMAESEREMKVSTLNAMLEVYCRNSLPTEAD 541
           Y PNFIT E LI+MYG+CDC+S+AREI+D M  S++EMKVSTLNAMLEVYC N LP EAD
Sbjct: 345 YAPNFITYESLIMMYGFCDCISRAREIFDEMMASKKEMKVSTLNAMLEVYCMNGLPMEAD 404

Query: 542 ALFESARSSRVCRINSSTYKLLYKAYTKADMNELLQKLLKHMDKDGIIPNKRFFLDALGA 721
            L E AR +R     SSTYKLLYKAYTKAD  ELL+KLLK MD DGI+PNKRFFL+ALGA
Sbjct: 405 LLLERARKNRPFP-GSSTYKLLYKAYTKADQKELLEKLLKLMDSDGILPNKRFFLEALGA 463

Query: 722 FGSSTNS 742
           FGSS  S
Sbjct: 464 FGSSPAS 470



 Score = 78.6 bits (192), Expect = 2e-12
 Identities = 52/221 (23%), Positives = 101/221 (45%), Gaps = 5/221 (2%)
 Frame = +2

Query: 20  LFKDLKDSVITPDIFTFNGMMDAY-----GKNGMIREMELLLTRMKSNQLKPDIITFNLL 184
           LF ++++S   PD   +N ++ A+         +I+ +          + KP+I+T+N+L
Sbjct: 156 LFSEMRNSGCRPDTSVYNALITAHLHSRDKSKALIKALGYFDKMKGMERCKPNIVTYNIL 215

Query: 185 IDSYGRKQEFEKMEQVFKSLLRSKERPTLPTFNSMITNYGKARLREKSELVYQKMTDMKY 364
           + ++ + Q   +   +FK L  S   P + TFN ++  YGK  + ++ E V  +M   + 
Sbjct: 216 LRAFAQAQNVNQANALFKELNESIVSPDIFTFNGVMDAYGKNGMIKEMESVLSRMKSNQC 275

Query: 365 TPNFITKECLIIMYGYCDCVSKAREIYDGMAESEREMKVSTLNAMLEVYCRNSLPTEADA 544
            P+ IT   LI  YG      K  +++  +  S+ +  + T N+M+  Y +  L  +A+ 
Sbjct: 276 KPDIITFNVLIDSYGRRQEFDKMEQVFKSLLRSKEKPTLPTFNSMITNYGKARLKEKAEN 335

Query: 545 LFESARSSRVCRINSSTYKLLYKAYTKADMNELLQKLLKHM 667
           +F+          N  TY+ L   Y   D     +++   M
Sbjct: 336 VFKKMTDMGYAP-NFITYESLIMMYGFCDCISRAREIFDEM 375


>ref|XP_002532046.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223528289|gb|EEF30336.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 478

 Score =  372 bits (954), Expect = e-101
 Identities = 185/243 (76%), Positives = 215/243 (88%)
 Frame = +2

Query: 2   VDQVEALFKDLKDSVITPDIFTFNGMMDAYGKNGMIREMELLLTRMKSNQLKPDIITFNL 181
           V+QV ALFKDL  S+++PDI+T+NG+MDAYGKNGMIREME +L+RMKSNQ KPDIITFNL
Sbjct: 223 VNQVNALFKDLDQSIVSPDIYTYNGVMDAYGKNGMIREMESVLSRMKSNQCKPDIITFNL 282

Query: 182 LIDSYGRKQEFEKMEQVFKSLLRSKERPTLPTFNSMITNYGKARLREKSELVYQKMTDMK 361
           LIDSYG+KQ+F+KMEQVFKSLL SKERPTLPTFNSMITNYGKAR +E +E V QKMT MK
Sbjct: 283 LIDSYGKKQDFDKMEQVFKSLLHSKERPTLPTFNSMITNYGKARQKENAESVLQKMTKMK 342

Query: 362 YTPNFITKECLIIMYGYCDCVSKAREIYDGMAESEREMKVSTLNAMLEVYCRNSLPTEAD 541
           YTPNFIT E LI+MYG+CD VSKAREI+D M ES +E+KVSTLNAML+VYC N LP EAD
Sbjct: 343 YTPNFITYESLIMMYGFCDSVSKAREIFDDMIESGKEVKVSTLNAMLDVYCLNGLPMEAD 402

Query: 542 ALFESARSSRVCRINSSTYKLLYKAYTKADMNELLQKLLKHMDKDGIIPNKRFFLDALGA 721
            LF++AR+  +   +S+TYKLLYKAYTKA+M +L+QKLLKHMD+DGIIPNKRFFLDALGA
Sbjct: 403 LLFDNARNVGLLP-DSTTYKLLYKAYTKANMKKLVQKLLKHMDRDGIIPNKRFFLDALGA 461

Query: 722 FGS 730
           F S
Sbjct: 462 FKS 464


>ref|XP_004169853.1| PREDICTED: pentatricopeptide repeat-containing protein At4g39620,
           chloroplastic-like [Cucumis sativus]
          Length = 494

 Score =  369 bits (946), Expect = e-100
 Identities = 184/244 (75%), Positives = 214/244 (87%)
 Frame = +2

Query: 2   VDQVEALFKDLKDSVITPDIFTFNGMMDAYGKNGMIREMELLLTRMKSNQLKPDIITFNL 181
           VDQV  LFKDL +SV++ DI+T+NG+MDAYGKNG I+EMEL+L RMKSNQ+KPDII+FNL
Sbjct: 218 VDQVNTLFKDLDESVVSADIYTYNGVMDAYGKNGNIKEMELMLARMKSNQIKPDIISFNL 277

Query: 182 LIDSYGRKQEFEKMEQVFKSLLRSKERPTLPTFNSMITNYGKARLREKSELVYQKMTDMK 361
           LIDSYG+KQ F+KMEQVFKSLLRSKERPTLPTFNSMITNYGKARLREK+E V++KM DM 
Sbjct: 278 LIDSYGKKQLFDKMEQVFKSLLRSKERPTLPTFNSMITNYGKARLREKAEEVFRKMKDMG 337

Query: 362 YTPNFITKECLIIMYGYCDCVSKAREIYDGMAESEREMKVSTLNAMLEVYCRNSLPTEAD 541
           Y P+++T E LI+MYG+CDCVSKAREI+DGM  S +E++VSTLNAML+VYC N LP EAD
Sbjct: 338 YDPSYVTCESLIMMYGHCDCVSKAREIFDGMVNSGKEVRVSTLNAMLDVYCINGLPLEAD 397

Query: 542 ALFESARSSRVCRINSSTYKLLYKAYTKADMNELLQKLLKHMDKDGIIPNKRFFLDALGA 721
            LFESA + RV   +S+TYKLLYKAYTKAD  ELL+KLLK+MDK GIIPNKRFFLDALG 
Sbjct: 398 LLFESAGNMRVFP-DSTTYKLLYKAYTKADKKELLEKLLKNMDKAGIIPNKRFFLDALGT 456

Query: 722 FGSS 733
            GSS
Sbjct: 457 IGSS 460


>ref|XP_004143565.1| PREDICTED: pentatricopeptide repeat-containing protein At4g39620,
           chloroplastic-like [Cucumis sativus]
          Length = 528

 Score =  369 bits (946), Expect = e-100
 Identities = 184/244 (75%), Positives = 214/244 (87%)
 Frame = +2

Query: 2   VDQVEALFKDLKDSVITPDIFTFNGMMDAYGKNGMIREMELLLTRMKSNQLKPDIITFNL 181
           VDQV  LFKDL +SV++ DI+T+NG+MDAYGKNG I+EMEL+L RMKSNQ+KPDII+FNL
Sbjct: 218 VDQVNTLFKDLDESVVSADIYTYNGVMDAYGKNGNIKEMELMLARMKSNQIKPDIISFNL 277

Query: 182 LIDSYGRKQEFEKMEQVFKSLLRSKERPTLPTFNSMITNYGKARLREKSELVYQKMTDMK 361
           LIDSYG+KQ F+KMEQVFKSLLRSKERPTLPTFNSMITNYGKARLREK+E V++KM DM 
Sbjct: 278 LIDSYGKKQLFDKMEQVFKSLLRSKERPTLPTFNSMITNYGKARLREKAEEVFRKMKDMG 337

Query: 362 YTPNFITKECLIIMYGYCDCVSKAREIYDGMAESEREMKVSTLNAMLEVYCRNSLPTEAD 541
           Y P+++T E LI+MYG+CDCVSKAREI+DGM  S +E++VSTLNAML+VYC N LP EAD
Sbjct: 338 YDPSYVTCESLIMMYGHCDCVSKAREIFDGMVNSGKEVRVSTLNAMLDVYCINGLPLEAD 397

Query: 542 ALFESARSSRVCRINSSTYKLLYKAYTKADMNELLQKLLKHMDKDGIIPNKRFFLDALGA 721
            LFESA + RV   +S+TYKLLYKAYTKAD  ELL+KLLK+MDK GIIPNKRFFLDALG 
Sbjct: 398 LLFESAGNMRVFP-DSTTYKLLYKAYTKADKKELLEKLLKNMDKAGIIPNKRFFLDALGT 456

Query: 722 FGSS 733
            GSS
Sbjct: 457 IGSS 460


>ref|XP_003524280.1| PREDICTED: pentatricopeptide repeat-containing protein At4g39620,
           chloroplastic-like [Glycine max]
          Length = 503

 Score =  363 bits (932), Expect = 3e-98
 Identities = 183/260 (70%), Positives = 219/260 (84%), Gaps = 1/260 (0%)
 Frame = +2

Query: 2   VDQVEALFKDLKDSVITPDIFTFNGMMDAYGKNGMIREMELLLTRMKSNQLKPDIITFNL 181
           V+QV +LFKDL +S+++PDI+TFNG+MDAYGKNGMIREME +L RMKSNQ KPD+ITFNL
Sbjct: 200 VEQVNSLFKDLDESIVSPDIYTFNGVMDAYGKNGMIREMEAVLARMKSNQCKPDLITFNL 259

Query: 182 LIDSYGRKQEFEKMEQVFKSLLRSKERPTLPTFNSMITNYGKARLREKSELVYQKMTDMK 361
           LIDSYG+KQEF KMEQVFKSLLRSKER +LPTFNSMI NYGKARL++K+E V+++MTDM 
Sbjct: 260 LIDSYGKKQEFGKMEQVFKSLLRSKERASLPTFNSMILNYGKARLKDKAEDVFKRMTDMG 319

Query: 362 YTPNFITKECLIIMYGYCDCVSKAREIYDGMAESEREMKVSTLNAMLEVYCRNSLPTEAD 541
           YTP+F+T E LI MYG+CDCVS+A +++D + ES+  +KVSTLNAML+VYC N LP EAD
Sbjct: 320 YTPSFVTHESLIYMYGFCDCVSRAAQLFDELVESKAHIKVSTLNAMLDVYCINGLPQEAD 379

Query: 542 ALFESARSSRVCRINSSTYKLLYKAYTKADMNELLQKLLKHMDKDGIIPNKRFFLDALGA 721
           +LFE A S ++   +SST+KLLYKAYTKA+  ELL KLLKHMDKDGI+PNKRFFLDALGA
Sbjct: 380 SLFERANSIKIYP-DSSTFKLLYKAYTKANQKELLDKLLKHMDKDGIVPNKRFFLDALGA 438

Query: 722 FGS-STNSLKANLLPATDRK 778
             S   NS  AN   ATD K
Sbjct: 439 VASLPANSESAN--AATDSK 456



 Score = 77.0 bits (188), Expect = 6e-12
 Identities = 46/183 (25%), Positives = 92/183 (50%), Gaps = 5/183 (2%)
 Frame = +2

Query: 20  LFKDLKDSVITPDIFTFNGMMDAY----GKNGMIREMELLLTRMKS-NQLKPDIITFNLL 184
           LF +++++   PD   +N ++ A+     K   + +      +MK   + KP+I+T+N+L
Sbjct: 131 LFSEMRNTGCRPDTSVYNALITAHLHSRDKTKALAKAIGYFQKMKGMERCKPNIVTYNIL 190

Query: 185 IDSYGRKQEFEKMEQVFKSLLRSKERPTLPTFNSMITNYGKARLREKSELVYQKMTDMKY 364
           + ++ + +  E++  +FK L  S   P + TFN ++  YGK  +  + E V  +M   + 
Sbjct: 191 LRAFAQARNVEQVNSLFKDLDESIVSPDIYTFNGVMDAYGKNGMIREMEAVLARMKSNQC 250

Query: 365 TPNFITKECLIIMYGYCDCVSKAREIYDGMAESEREMKVSTLNAMLEVYCRNSLPTEADA 544
            P+ IT   LI  YG      K  +++  +  S+    + T N+M+  Y +  L  +A+ 
Sbjct: 251 KPDLITFNLLIDSYGKKQEFGKMEQVFKSLLRSKERASLPTFNSMILNYGKARLKDKAED 310

Query: 545 LFE 553
           +F+
Sbjct: 311 VFK 313