BLASTX nr result

ID: Angelica23_contig00016104 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica23_contig00016104
         (739 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002327990.1| predicted protein [Populus trichocarpa] gi|2...   226   5e-57
ref|XP_003606823.1| F-box protein SKIP16 [Medicago truncatula] g...   222   6e-56
gb|ACJ84698.1| unknown [Medicago truncatula]                          222   6e-56
ref|XP_002271000.1| PREDICTED: F-box protein SKIP16-like [Vitis ...   219   4e-55
ref|XP_004160649.1| PREDICTED: LOW QUALITY PROTEIN: F-box protei...   219   6e-55

>ref|XP_002327990.1| predicted protein [Populus trichocarpa] gi|222837399|gb|EEE75778.1|
           predicted protein [Populus trichocarpa]
          Length = 442

 Score =  226 bits (575), Expect = 5e-57
 Identities = 119/213 (55%), Positives = 146/213 (68%), Gaps = 2/213 (0%)
 Frame = +2

Query: 98  IEMLGGLEIHTILNKLGPKETIIVGCVSHNFQDWASDDSLWSQFCAQELLLFSPEDPLGS 277
           I  LG L ++ IL KLGPKET  V CVS  F+D AS++SLWS FC Q+L L +P D  G+
Sbjct: 5   INKLGDLALNIILTKLGPKETAKVSCVSKRFKDLASEESLWSLFCLQDLDLSAPLDHHGN 64

Query: 278 ATPSFKAAYQAWRKSFGMYPWSLVIRVRRCWERIKSWLVVNFPEAMTTLRKGATEDVINN 457
              SFKA Y+ WR++F MYPWSLV RV+ CW+R+KSWL  NFPE   TL +GA+E  I  
Sbjct: 65  PLRSFKATYKLWREAFCMYPWSLVKRVKSCWDRLKSWLTTNFPEVKATLGRGASEGEIQE 124

Query: 458 LETSLNVKLPRPTRVLYRFCDGQNLA--KYSESFSTSLLGLIGGYSFCDYLVNVYLLPLA 631
           LE  L VKLP PTR+LYRF DGQNL     +   +  LLGLIGGY F D+LVNVYLLPL 
Sbjct: 125 LERILKVKLPLPTRLLYRFHDGQNLTGENLNTDAAACLLGLIGGYCFYDHLVNVYLLPLH 184

Query: 632 EVIRITNFVRRHLIEFVGVPFGTEFLIVAGSST 730
           EVI  T  + RHL     +P G++F++VA SS+
Sbjct: 185 EVILETREIVRHL----DLPNGSQFIVVAASSS 213


>ref|XP_003606823.1| F-box protein SKIP16 [Medicago truncatula]
           gi|355507878|gb|AES89020.1| F-box protein SKIP16
           [Medicago truncatula]
          Length = 443

 Score =  222 bits (566), Expect = 6e-56
 Identities = 114/217 (52%), Positives = 150/217 (69%), Gaps = 2/217 (0%)
 Frame = +2

Query: 92  MGIEMLGGLEIHTILNKLGPKETIIVGCVSHNFQDWASDDSLWSQFCAQELLLFSPEDPL 271
           M +E +G L IH I+  L P++   + CVS+ F+ + SDDSLWS+ C +EL L  P D L
Sbjct: 1   MDLESVGDLAIHEIMENLKPEDIARISCVSNRFKSFTSDDSLWSKICFRELSLTQPIDHL 60

Query: 272 GSATPSFKAAYQAWRKSFGMYPWSLVIRVRRCWERIKSWLVVNFPEAMTTLRKGATEDVI 451
           G+ TPSFK AYQ WR++F MYPWSLV RV+RCW+ IK+WL  NFPEA  TL +GA+E  I
Sbjct: 61  GNPTPSFKEAYQTWREAFVMYPWSLVKRVKRCWDNIKTWLTNNFPEAKETLCEGASEVEI 120

Query: 452 NNLETSLNVKLPRPTRVLYRFCDGQNLAKYSESFSTS--LLGLIGGYSFCDYLVNVYLLP 625
             LE  LNVKLP PTR+LYRF +GQ + K+    STS   LG+IGGYSF D+ VNVYLLP
Sbjct: 121 QELEDVLNVKLPLPTRILYRFHNGQEIEKHDHDTSTSDISLGIIGGYSFYDHFVNVYLLP 180

Query: 626 LAEVIRITNFVRRHLIEFVGVPFGTEFLIVAGSSTGR 736
           +++VI+ T  +  +L    G    +++++VA SST R
Sbjct: 181 ISQVIQETQQISHNL----GFLRRSKYVLVAASSTYR 213


>gb|ACJ84698.1| unknown [Medicago truncatula]
          Length = 318

 Score =  222 bits (566), Expect = 6e-56
 Identities = 114/217 (52%), Positives = 150/217 (69%), Gaps = 2/217 (0%)
 Frame = +2

Query: 92  MGIEMLGGLEIHTILNKLGPKETIIVGCVSHNFQDWASDDSLWSQFCAQELLLFSPEDPL 271
           M +E +G L IH I+  L P++   + CVS+ F+ + SDDSLWS+ C +EL L  P D L
Sbjct: 1   MDLESVGDLAIHEIMENLKPEDIARISCVSNRFKSFTSDDSLWSKICFRELSLTQPIDHL 60

Query: 272 GSATPSFKAAYQAWRKSFGMYPWSLVIRVRRCWERIKSWLVVNFPEAMTTLRKGATEDVI 451
           G+ TPSFK AYQ WR++F MYPWSLV RV+RCW+ IK+WL  NFPEA  TL +GA+E  I
Sbjct: 61  GNPTPSFKEAYQTWREAFVMYPWSLVKRVKRCWDNIKTWLTNNFPEARETLCEGASEVEI 120

Query: 452 NNLETSLNVKLPRPTRVLYRFCDGQNLAKYSESFSTS--LLGLIGGYSFCDYLVNVYLLP 625
             LE  LNVKLP PTR+LYRF +GQ + K+    STS   LG+IGGYSF D+ VNVYLLP
Sbjct: 121 QELEDVLNVKLPLPTRILYRFHNGQEIEKHDHDTSTSDISLGIIGGYSFYDHFVNVYLLP 180

Query: 626 LAEVIRITNFVRRHLIEFVGVPFGTEFLIVAGSSTGR 736
           +++VI+ T  +  +L    G    +++++VA SST R
Sbjct: 181 ISQVIQETQQISHNL----GFLRRSKYVLVAASSTYR 213


>ref|XP_002271000.1| PREDICTED: F-box protein SKIP16-like [Vitis vinifera]
          Length = 444

 Score =  219 bits (559), Expect = 4e-55
 Identities = 115/215 (53%), Positives = 147/215 (68%), Gaps = 1/215 (0%)
 Frame = +2

Query: 89  KMGIEMLGGLEIHTILNKLGPKETIIVGCVSHNFQDWASDDSLWSQFCAQELLLFSPEDP 268
           +MG+E LG L I+ I++KL  K+T+ V CVS   +  AS++SLW   C+Q+L L +P DP
Sbjct: 2   EMGLEDLGDLAINAIISKLDTKDTVAVSCVSKKLRVSASEESLWLNHCSQDLGLSAPIDP 61

Query: 269 LGSATPSFKAAYQAWRKSFGMYPWSLVIRVRRCWERIKSWLVVNFPEAMTTLRKGATEDV 448
           LG   PSFK  Y+ WR+SFGMYPW LV RV+RCW+R+K+WL  NFPEA  TLRKGATE  
Sbjct: 62  LGKPAPSFKETYRLWRESFGMYPWPLVKRVKRCWDRLKNWLSANFPEADATLRKGATEVE 121

Query: 449 INNLETSLNVKLPRPTRVLYRFCDGQNLA-KYSESFSTSLLGLIGGYSFCDYLVNVYLLP 625
           I  LE  L VKLP PTR+LYRFCDGQ L      +   S LG+IGGY F D+LVNV LLP
Sbjct: 122 IEALENILKVKLPLPTRLLYRFCDGQELTDDVGGTALGSSLGIIGGYCFYDHLVNVCLLP 181

Query: 626 LAEVIRITNFVRRHLIEFVGVPFGTEFLIVAGSST 730
           L +VI  T    + + + +G    ++++IVA SST
Sbjct: 182 LRQVILET----KEITDQLGFSTTSKYVIVAASST 212


>ref|XP_004160649.1| PREDICTED: LOW QUALITY PROTEIN: F-box protein SKIP16-like [Cucumis
           sativus]
          Length = 441

 Score =  219 bits (557), Expect = 6e-55
 Identities = 112/214 (52%), Positives = 143/214 (66%), Gaps = 1/214 (0%)
 Frame = +2

Query: 92  MGIEMLGGLEIHTILNKLGPKETIIVGCVSHNFQDWASDDSLWSQFCAQELLLFSPEDPL 271
           M +E +  L +H +  KLGPK++ I  CVS  F+  AS+DSLW +FC Q+L L  P D L
Sbjct: 1   MELEGVDDLFLHLVFAKLGPKDSAIAACVSRQFRSSASEDSLWKKFCNQDLNLTDPVDHL 60

Query: 272 GSATPSFKAAYQAWRKSFGMYPWSLVIRVRRCWERIKSWLVVNFPEAMTTLRKGATEDVI 451
           G+  PSFK  YQ WR++FGMYPW LV RV+RCW+R+K+WL  NFPEA+ TLR GA+E  I
Sbjct: 61  GNPIPSFKETYQVWRRAFGMYPWPLVKRVKRCWDRLKNWLSTNFPEALRTLRDGASEADI 120

Query: 452 NNLETSLNVKLPRPTRVLYRFCDGQNL-AKYSESFSTSLLGLIGGYSFCDYLVNVYLLPL 628
             LE  L VKLP PTR+LYRF +GQ L   Y +S     LGLIGGY+F    VNVYLLPL
Sbjct: 121 EELENVLKVKLPLPTRILYRFHNGQELKGGYVDSIRGFPLGLIGGYTFYGETVNVYLLPL 180

Query: 629 AEVIRITNFVRRHLIEFVGVPFGTEFLIVAGSST 730
            +V+    F  + +I  VG    ++F++VA SST
Sbjct: 181 RQVV----FETKSIIRDVGFQXKSKFIVVASSST 210


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