BLASTX nr result

ID: Angelica23_contig00016008 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica23_contig00016008
         (283 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN68148.1| hypothetical protein VITISV_035665 [Vitis vinifera]    72   5e-11
ref|XP_003555650.1| PREDICTED: uncharacterized protein LOC100817...    60   1e-07
gb|AAB61111.1| Strong similarity to Zea mays retrotransposon Hop...    58   9e-07
emb|CAN61743.1| hypothetical protein VITISV_038639 [Vitis vinifera]    55   6e-06
emb|CAN81016.1| hypothetical protein VITISV_025518 [Vitis vinifera]    55   8e-06

>emb|CAN68148.1| hypothetical protein VITISV_035665 [Vitis vinifera]
          Length = 1813

 Score = 72.0 bits (175), Expect = 5e-11
 Identities = 40/86 (46%), Positives = 48/86 (55%)
 Frame = -3

Query: 263 VIGRGIRISGLYQLQPFLGVNSVNKLCQSSHMDIWHCRLGHPSIDRLKLLCSSFPFIRSN 84
           +IG G +  GLY + P    + V  + Q S  D+WH RLGHPS  R KLL    P I   
Sbjct: 738 MIGSGKQRGGLYYMHPSTNKSVVFHVSQPS--DLWHLRLGHPSFSRFKLLSRLLPDIHKE 795

Query: 83  FHF*CNVCPQAK*ARLPFNKSSIFSK 6
               C +CPQAK  RLPF KSSI +K
Sbjct: 796 IGNHCPICPQAKQTRLPFPKSSITTK 821


>ref|XP_003555650.1| PREDICTED: uncharacterized protein LOC100817175 [Glycine max]
          Length = 2045

 Score = 60.5 bits (145), Expect = 1e-07
 Identities = 31/79 (39%), Positives = 47/79 (59%), Gaps = 6/79 (7%)
 Frame = -3

Query: 236  GLYQLQPF-LGVNSVNKL-----CQSSHMDIWHCRLGHPSIDRLKLLCSSFPFIRSNFHF 75
            GLY L P  L   +VN       C    +D+WH RLGHPS +R++ + + +P +R+N +F
Sbjct: 848  GLYHLIPNQLTTKAVNSTITHPRCNVIPIDLWHFRLGHPSAERIQCMKTYYPLLRNNKNF 907

Query: 74   *CNVCPQAK*ARLPFNKSS 18
             CN C  AK  ++PF+ S+
Sbjct: 908  VCNTCHYAKHKKMPFSLSN 926


>gb|AAB61111.1| Strong similarity to Zea mays retrotransposon Hopscotch polyprotein
           (gb|U12626) [Arabidopsis thaliana]
          Length = 1315

 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 35/98 (35%), Positives = 55/98 (56%), Gaps = 10/98 (10%)
 Frame = -3

Query: 281 DRTKKIVIGRGIRISGLYQLQ----PFLGVNSVNKLCQSSHMDIWHCRLGHPSIDRLKLL 114
           D T+++++G G +++ LY +        G +S   +   +  D+WH RLGHPS+ +L+ +
Sbjct: 363 DATRELMVGMGKQVANLYIVDLDSLSHPGTDSSITVASVTSHDLWHKRLGHPSVQKLQPM 422

Query: 113 CS--SFPFIRSNFHF*CNVCPQAK*ARLPF----NKSS 18
            S  SFP  ++N  F C VC  +K   LPF    NKSS
Sbjct: 423 SSLLSFPKQKNNTDFHCRVCHISKQKHLPFVSHNNKSS 460


>emb|CAN61743.1| hypothetical protein VITISV_038639 [Vitis vinifera]
          Length = 481

 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 38/104 (36%), Positives = 50/104 (48%), Gaps = 17/104 (16%)
 Frame = -3

Query: 281 DRTKKIVIGRGIRISGLYQLQPFLGVNSVNKLCQS--------------SHMDIWHCRLG 144
           D++ + +IG  +   GLY L P    +S  K C S               H DIWHCRLG
Sbjct: 384 DQSMEKMIGIALEKEGLYHLIP---ASSQAKTCNSFQFNSAPLALSSIHKHFDIWHCRLG 440

Query: 143 HPSIDR---LKLLCSSFPFIRSNFHF*CNVCPQAK*ARLPFNKS 21
           H S  R   LK + S+     +N    C++CP AK  RLPF+ S
Sbjct: 441 HVSSSRFHSLKQIDSAITLDHTNV---CHICPLAKQRRLPFSVS 481


>emb|CAN81016.1| hypothetical protein VITISV_025518 [Vitis vinifera]
          Length = 1461

 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 35/91 (38%), Positives = 44/91 (48%)
 Frame = -3

Query: 281 DRTKKIVIGRGIRISGLYQLQPFLGVNSVNKLCQSSHMDIWHCRLGHPSIDRLKLLCSSF 102
           D T +  IG G + +GLY L      N         H D+WH RLGHPS   L++L    
Sbjct: 501 DATTRKTIGLGKQHNGLYYLAQ--DQNPALAYAIHKHSDLWHQRLGHPSSGPLQVLAKVN 558

Query: 101 PFIRSNFHF*CNVCPQAK*ARLPFNKSSIFS 9
           P I  +    C++CP AK  RL F  S I S
Sbjct: 559 PKIYFDSKHVCDICPLAKQTRLSFPSSFISS 589


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