BLASTX nr result

ID: Angelica23_contig00016002 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica23_contig00016002
         (866 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002282269.1| PREDICTED: signal recognition particle 9 kDa...   101   7e-26
ref|NP_190479.1| signal recognition particle subunit SRP9 [Arabi...   102   1e-25
ref|XP_002875940.1| hypothetical protein ARALYDRAFT_906164 [Arab...   102   2e-25
gb|AFK36667.1| unknown [Lotus japonicus]                               99   4e-25
ref|XP_002302071.1| predicted protein [Populus trichocarpa] gi|2...    99   6e-25

>ref|XP_002282269.1| PREDICTED: signal recognition particle 9 kDa protein [Vitis
           vinifera] gi|297735510|emb|CBI17950.3| unnamed protein
           product [Vitis vinifera]
          Length = 103

 Score =  101 bits (252), Expect(2) = 7e-26
 Identities = 49/55 (89%), Positives = 50/55 (90%)
 Frame = +1

Query: 349 CLKFKTDQAQDAKKMEKLNNIFFTLMARGPEVDFNEVAGKEQAESQPAKKGRGRK 513
           CLKFKTDQAQDAKKMEKLNNIFFTLMARGPEVD +EV GKE  E QPAKKGRGRK
Sbjct: 48  CLKFKTDQAQDAKKMEKLNNIFFTLMARGPEVDISEVTGKEAMEVQPAKKGRGRK 102



 Score = 42.4 bits (98), Expect(2) = 7e-26
 Identities = 18/23 (78%), Positives = 20/23 (86%)
 Frame = +3

Query: 198 MVYITSWDDFVQRSVELFRAHPD 266
           MVYI SWD+FV RSV+LFRA PD
Sbjct: 1   MVYIESWDEFVDRSVQLFRADPD 23


>ref|NP_190479.1| signal recognition particle subunit SRP9 [Arabidopsis thaliana]
           gi|12230639|sp|Q9SMU7.1|SRP09_ARATH RecName: Full=Signal
           recognition particle 9 kDa protein; Short=SRP9
           gi|6522556|emb|CAB62000.1| signal recognition particle
           subunit 9-like [Arabidopsis thaliana]
           gi|21553473|gb|AAM62566.1| signal recognition particle 9
           kDa protein SRP9 [Arabidopsis thaliana]
           gi|28466801|gb|AAO44009.1| At3g49100 [Arabidopsis
           thaliana] gi|110736135|dbj|BAF00039.1| signal
           recognition particle subunit 9 - like [Arabidopsis
           thaliana] gi|332644977|gb|AEE78498.1| signal recognition
           particle subunit SRP9 [Arabidopsis thaliana]
          Length = 103

 Score =  102 bits (254), Expect(2) = 1e-25
 Identities = 48/55 (87%), Positives = 52/55 (94%)
 Frame = +1

Query: 349 CLKFKTDQAQDAKKMEKLNNIFFTLMARGPEVDFNEVAGKEQAESQPAKKGRGRK 513
           CLKFKTDQAQ+AKKMEKLNNIFFTLMARGP+VD +EV GKEQ E+QPAKKGRGRK
Sbjct: 48  CLKFKTDQAQEAKKMEKLNNIFFTLMARGPDVDLSEVTGKEQMETQPAKKGRGRK 102



 Score = 41.2 bits (95), Expect(2) = 1e-25
 Identities = 17/23 (73%), Positives = 20/23 (86%)
 Frame = +3

Query: 198 MVYITSWDDFVQRSVELFRAHPD 266
           MVYI SWD+FV RSV+LFRA P+
Sbjct: 1   MVYIASWDEFVDRSVQLFRADPE 23


>ref|XP_002875940.1| hypothetical protein ARALYDRAFT_906164 [Arabidopsis lyrata subsp.
           lyrata] gi|297321778|gb|EFH52199.1| hypothetical protein
           ARALYDRAFT_906164 [Arabidopsis lyrata subsp. lyrata]
          Length = 103

 Score =  102 bits (254), Expect(2) = 2e-25
 Identities = 48/55 (87%), Positives = 52/55 (94%)
 Frame = +1

Query: 349 CLKFKTDQAQDAKKMEKLNNIFFTLMARGPEVDFNEVAGKEQAESQPAKKGRGRK 513
           CLKFKTDQAQ+AKKMEKLNNIFFTLMARGP+VD +EV GKEQ E+QPAKKGRGRK
Sbjct: 48  CLKFKTDQAQEAKKMEKLNNIFFTLMARGPDVDLSEVTGKEQMETQPAKKGRGRK 102



 Score = 40.4 bits (93), Expect(2) = 2e-25
 Identities = 16/23 (69%), Positives = 20/23 (86%)
 Frame = +3

Query: 198 MVYITSWDDFVQRSVELFRAHPD 266
           MVYI SWD+FV RSV++FRA P+
Sbjct: 1   MVYIASWDEFVDRSVQIFRADPE 23


>gb|AFK36667.1| unknown [Lotus japonicus]
          Length = 103

 Score = 99.4 bits (246), Expect(2) = 4e-25
 Identities = 45/55 (81%), Positives = 52/55 (94%)
 Frame = +1

Query: 349 CLKFKTDQAQDAKKMEKLNNIFFTLMARGPEVDFNEVAGKEQAESQPAKKGRGRK 513
           CLK+KTDQ+Q+AKKMEKLNNIFFTLMARGPEVD +EV GKEQ ++QPAK+GRGRK
Sbjct: 48  CLKYKTDQSQEAKKMEKLNNIFFTLMARGPEVDLSEVTGKEQTDAQPAKRGRGRK 102



 Score = 42.4 bits (98), Expect(2) = 4e-25
 Identities = 17/23 (73%), Positives = 21/23 (91%)
 Frame = +3

Query: 198 MVYITSWDDFVQRSVELFRAHPD 266
           MVYITSWD+FV R+V+L+RA PD
Sbjct: 1   MVYITSWDEFVDRTVQLYRADPD 23


>ref|XP_002302071.1| predicted protein [Populus trichocarpa] gi|222843797|gb|EEE81344.1|
           predicted protein [Populus trichocarpa]
          Length = 103

 Score = 98.6 bits (244), Expect(2) = 6e-25
 Identities = 46/55 (83%), Positives = 49/55 (89%)
 Frame = +1

Query: 349 CLKFKTDQAQDAKKMEKLNNIFFTLMARGPEVDFNEVAGKEQAESQPAKKGRGRK 513
           CLKFKTDQAQDAKKMEKLNN FFTLM+RGPE D +EV GKEQ E+QP KKGRGRK
Sbjct: 48  CLKFKTDQAQDAKKMEKLNNQFFTLMSRGPEADLSEVTGKEQTEAQPGKKGRGRK 102



 Score = 42.4 bits (98), Expect(2) = 6e-25
 Identities = 17/23 (73%), Positives = 21/23 (91%)
 Frame = +3

Query: 198 MVYITSWDDFVQRSVELFRAHPD 266
           MVY+ SWD+FV+RSV+LFRA PD
Sbjct: 1   MVYMASWDEFVERSVQLFRADPD 23


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