BLASTX nr result

ID: Angelica23_contig00015903 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica23_contig00015903
         (1294 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI19279.3| unnamed protein product [Vitis vinifera]              221   3e-55
ref|XP_002285663.1| PREDICTED: double-stranded RNA-binding prote...   221   3e-55
ref|XP_003523789.1| PREDICTED: double-stranded RNA-binding prote...   214   4e-53
ref|XP_003526553.1| PREDICTED: double-stranded RNA-binding prote...   213   1e-52
gb|ACU19095.1| unknown [Glycine max]                                  213   1e-52

>emb|CBI19279.3| unnamed protein product [Vitis vinifera]
          Length = 415

 Score =  221 bits (563), Expect = 3e-55
 Identities = 135/284 (47%), Positives = 164/284 (57%), Gaps = 8/284 (2%)
 Frame = -2

Query: 1230 VSNCYVFKSLLQEYAQKAKLPNPTYNTIKEGPSHEPSFRSTVIVNDVTYDSLPGFFSRRD 1051
            VSNCYVFKS LQEYAQK  LP P Y+TIKEGP H PSF+STVIVNDV YDSLPGF +R+ 
Sbjct: 10   VSNCYVFKSRLQEYAQKVGLPTPLYDTIKEGPPHVPSFKSTVIVNDVRYDSLPGFSNRKA 69

Query: 1050 AEQSAAEVALKALANSGAMGECISQPVHDTGLCKNLLQAYAQKMNFAIPLYVCHKDEKPG 871
            AEQSAAEVAL  LA SG M ECISQPVH+TGLCKNLLQ YAQKMN+AIP+YVC KDE PG
Sbjct: 70   AEQSAAEVALVELAKSGNMKECISQPVHETGLCKNLLQEYAQKMNYAIPMYVCQKDESPG 129

Query: 870  -MTGFSCTVDXXXXXXXXXXXXXXXXXXXXXARTALLAIQSDPXXXXXXXXXXXSTFTVV 694
                FSCTV+                     ARTALLAI+++            +  TV+
Sbjct: 130  RAASFSCTVEIGGIRYIGAAARTKKEAEIKAARTALLAIRAN-TDGVGEKSIGNTQLTVI 188

Query: 693  PGKKKVSDSVMKAQETAAALXXXXXXXXXXXXXRLNRDRGKNGQNAED--NVNVNIEGQV 520
            PGKKK  +S     E A AL             +            ED   + V+I+ QV
Sbjct: 189  PGKKKGPES-GNPDEPAKALKPKKARFKTKGLRKKFPGNKVGNDQVEDTRGMEVDIDNQV 247

Query: 519  APEAIKTAVIVAETVDTGF-----PPTGEIQEKLSEFNGGDQSV 403
              E ++T   + +  ++G          E ++ +   NGGD++V
Sbjct: 248  GSELLQTDASMVQVAESGLLSMESKENFEEEKSIVNQNGGDKTV 291


>ref|XP_002285663.1| PREDICTED: double-stranded RNA-binding protein 1 [Vitis vinifera]
            gi|147781065|emb|CAN68128.1| hypothetical protein
            VITISV_043706 [Vitis vinifera]
          Length = 400

 Score =  221 bits (563), Expect = 3e-55
 Identities = 135/284 (47%), Positives = 164/284 (57%), Gaps = 8/284 (2%)
 Frame = -2

Query: 1230 VSNCYVFKSLLQEYAQKAKLPNPTYNTIKEGPSHEPSFRSTVIVNDVTYDSLPGFFSRRD 1051
            VSNCYVFKS LQEYAQK  LP P Y+TIKEGP H PSF+STVIVNDV YDSLPGF +R+ 
Sbjct: 10   VSNCYVFKSRLQEYAQKVGLPTPLYDTIKEGPPHVPSFKSTVIVNDVRYDSLPGFSNRKA 69

Query: 1050 AEQSAAEVALKALANSGAMGECISQPVHDTGLCKNLLQAYAQKMNFAIPLYVCHKDEKPG 871
            AEQSAAEVAL  LA SG M ECISQPVH+TGLCKNLLQ YAQKMN+AIP+YVC KDE PG
Sbjct: 70   AEQSAAEVALVELAKSGNMKECISQPVHETGLCKNLLQEYAQKMNYAIPMYVCQKDESPG 129

Query: 870  -MTGFSCTVDXXXXXXXXXXXXXXXXXXXXXARTALLAIQSDPXXXXXXXXXXXSTFTVV 694
                FSCTV+                     ARTALLAI+++            +  TV+
Sbjct: 130  RAASFSCTVEIGGIRYIGAAARTKKEAEIKAARTALLAIRAN-TDGVGEKSIGNTQLTVI 188

Query: 693  PGKKKVSDSVMKAQETAAALXXXXXXXXXXXXXRLNRDRGKNGQNAED--NVNVNIEGQV 520
            PGKKK  +S     E A AL             +            ED   + V+I+ QV
Sbjct: 189  PGKKKGPES-GNPDEPAKALKPKKARFKTKGLRKKFPGNKVGNDQVEDTRGMEVDIDNQV 247

Query: 519  APEAIKTAVIVAETVDTGF-----PPTGEIQEKLSEFNGGDQSV 403
              E ++T   + +  ++G          E ++ +   NGGD++V
Sbjct: 248  GSELLQTDASMVQVAESGLLSMESKENFEEEKSIVNQNGGDKTV 291


>ref|XP_003523789.1| PREDICTED: double-stranded RNA-binding protein 1-like [Glycine max]
          Length = 359

 Score =  214 bits (545), Expect = 4e-53
 Identities = 118/198 (59%), Positives = 132/198 (66%), Gaps = 1/198 (0%)
 Frame = -2

Query: 1233 SVSNCYVFKSLLQEYAQKAKLPNPTYNTIKEGPSHEPSFRSTVIVNDVTYDSLPGFFSRR 1054
            SVSNCYVFKS LQEYAQKA LP P Y TIKEGPSHEPSFRSTVIVNDV YDSLPGFF+R+
Sbjct: 9    SVSNCYVFKSRLQEYAQKAGLPTPVYETIKEGPSHEPSFRSTVIVNDVRYDSLPGFFNRK 68

Query: 1053 DAEQSAAEVALKALANSGAMGECISQPVHDTGLCKNLLQAYAQKMNFAIPLYVCHKDEKP 874
             AEQSAAEVAL  L  S A+ + I+QPVH+TGLCKNLLQ YAQKMN+A+P+Y C KDE P
Sbjct: 69   AAEQSAAEVALVELVKSNAVNQSITQPVHETGLCKNLLQEYAQKMNYAMPMYQCKKDETP 128

Query: 873  GMTG-FSCTVDXXXXXXXXXXXXXXXXXXXXXARTALLAIQSDPXXXXXXXXXXXSTFTV 697
            G    FSCTVD                     ARTALLAIQS                TV
Sbjct: 129  GRASVFSCTVDIGGILYIGGAAKTKKEAEIKAARTALLAIQSS-ASHASENQVGHPQLTV 187

Query: 696  VPGKKKVSDSVMKAQETA 643
            +P +K+ + SV  A E +
Sbjct: 188  LPCRKRATSSVAIADENS 205


>ref|XP_003526553.1| PREDICTED: double-stranded RNA-binding protein 1-like [Glycine max]
          Length = 359

 Score =  213 bits (541), Expect = 1e-52
 Identities = 117/198 (59%), Positives = 132/198 (66%), Gaps = 1/198 (0%)
 Frame = -2

Query: 1233 SVSNCYVFKSLLQEYAQKAKLPNPTYNTIKEGPSHEPSFRSTVIVNDVTYDSLPGFFSRR 1054
            SVSNCYVFKS LQEYAQKA LP P Y TIKEGPSHEPSFRSTVIVNDV YDSLPGFF+R+
Sbjct: 9    SVSNCYVFKSRLQEYAQKAGLPTPVYETIKEGPSHEPSFRSTVIVNDVRYDSLPGFFNRK 68

Query: 1053 DAEQSAAEVALKALANSGAMGECISQPVHDTGLCKNLLQAYAQKMNFAIPLYVCHKDEKP 874
             AEQSAAEVAL  L  S  + + I+QPVH+TGLCKNLLQ YAQKMN+A+P+Y C KDE P
Sbjct: 69   AAEQSAAEVALVELIKSNLVNQSITQPVHETGLCKNLLQEYAQKMNYAMPMYQCKKDETP 128

Query: 873  GMTG-FSCTVDXXXXXXXXXXXXXXXXXXXXXARTALLAIQSDPXXXXXXXXXXXSTFTV 697
            G    FSCTVD                     ARTALLAIQS                TV
Sbjct: 129  GRASVFSCTVDIGGILYIGGAAKTKKEAEIKAARTALLAIQSS-ASQASQDQVGHPQLTV 187

Query: 696  VPGKKKVSDSVMKAQETA 643
            +P +K+ ++SV  A E +
Sbjct: 188  LPCRKRATESVAIADENS 205


>gb|ACU19095.1| unknown [Glycine max]
          Length = 359

 Score =  213 bits (541), Expect = 1e-52
 Identities = 117/198 (59%), Positives = 132/198 (66%), Gaps = 1/198 (0%)
 Frame = -2

Query: 1233 SVSNCYVFKSLLQEYAQKAKLPNPTYNTIKEGPSHEPSFRSTVIVNDVTYDSLPGFFSRR 1054
            SVSNCYVFKS LQEYAQKA LP P Y TIKEGPSHEPSFRSTVIVNDV YDSLPGFF+R+
Sbjct: 9    SVSNCYVFKSRLQEYAQKAGLPTPVYETIKEGPSHEPSFRSTVIVNDVRYDSLPGFFNRK 68

Query: 1053 DAEQSAAEVALKALANSGAMGECISQPVHDTGLCKNLLQAYAQKMNFAIPLYVCHKDEKP 874
             AEQSAAEVAL  L  S  + + I+QPVH+TGLCKNLLQ YAQKMN+A+P+Y C KDE P
Sbjct: 69   AAEQSAAEVALVELIKSNLVNQSITQPVHETGLCKNLLQEYAQKMNYAMPMYQCKKDETP 128

Query: 873  GMTG-FSCTVDXXXXXXXXXXXXXXXXXXXXXARTALLAIQSDPXXXXXXXXXXXSTFTV 697
            G    FSCTVD                     ARTALLAIQS                TV
Sbjct: 129  GRASVFSCTVDIGGILYIGGAAKTKKEAEIKAARTALLAIQSS-ASQASQDQVGHPQLTV 187

Query: 696  VPGKKKVSDSVMKAQETA 643
            +P +K+ ++SV  A E +
Sbjct: 188  LPCRKRATESVAIADENS 205


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