BLASTX nr result

ID: Angelica23_contig00015568 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica23_contig00015568
         (934 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI34982.3| unnamed protein product [Vitis vinifera]              237   3e-60
ref|XP_002275511.1| PREDICTED: chloroplastic group IIA intron sp...   237   3e-60
emb|CAN81271.1| hypothetical protein VITISV_006146 [Vitis vinifera]   237   3e-60
ref|XP_002300024.1| predicted protein [Populus trichocarpa] gi|2...   234   2e-59
ref|XP_004164655.1| PREDICTED: LOW QUALITY PROTEIN: chloroplasti...   233   5e-59

>emb|CBI34982.3| unnamed protein product [Vitis vinifera]
          Length = 1028

 Score =  237 bits (605), Expect = 3e-60
 Identities = 131/231 (56%), Positives = 163/231 (70%)
 Frame = -1

Query: 694 NQKLSRFPRVRASVTNTSTPLLPHSAIQRIAEKLRTLGFDNDDETSPPLPRQPADDDDNS 515
           N K S+F  +RAS  N     LP +AIQRIAEKLR+LG+ + DE+   L         +S
Sbjct: 59  NPKPSKFI-LRAS--NPDAQTLPKTAIQRIAEKLRSLGYVDGDESRKVL---------SS 106

Query: 514 NKISNAISPGQIFVPLPTDIPKYRVGHTFDSSWSXXXXXXXXXXXXTAIRRYHQLRNEVQ 335
           +K +N  S G+IFVPLP  +PK+RVGHT D SWS              I R+H+LR EV+
Sbjct: 107 DKPANG-SAGEIFVPLPNQLPKHRVGHTIDQSWSLPENPVPEPGTGGVITRFHELRKEVK 165

Query: 334 VEKGKRRKVVENNVPSLAELKLSSNELKRLQSVGIKLKQKLKVGKAGITEGIVNGIHERW 155
            EK   RK  E   P+LAEL L   EL+RL+ +GI++++KLKVGKAGITEGIVNGIHERW
Sbjct: 166 REKKLVRKEDER-APTLAELTLPEEELRRLKGIGIQIRKKLKVGKAGITEGIVNGIHERW 224

Query: 154 RHTELVKIKCDDICRLNMKRTHVLLERKTGGLVIWRSGSNMIVYRGADYKY 2
           R  E+VKI+C+DIC+LNMKRTH +LERKTGGLVIWRSGS +I+YRGA+YKY
Sbjct: 225 RRAEVVKIRCEDICKLNMKRTHDILERKTGGLVIWRSGSYIILYRGANYKY 275


>ref|XP_002275511.1| PREDICTED: chloroplastic group IIA intron splicing facilitator
           CRS1, chloroplastic-like [Vitis vinifera]
          Length = 1044

 Score =  237 bits (605), Expect = 3e-60
 Identities = 131/231 (56%), Positives = 163/231 (70%)
 Frame = -1

Query: 694 NQKLSRFPRVRASVTNTSTPLLPHSAIQRIAEKLRTLGFDNDDETSPPLPRQPADDDDNS 515
           N K S+F  +RAS  N     LP +AIQRIAEKLR+LG+ + DE+   L         +S
Sbjct: 59  NPKPSKFI-LRAS--NPDAQTLPKTAIQRIAEKLRSLGYVDGDESRKVL---------SS 106

Query: 514 NKISNAISPGQIFVPLPTDIPKYRVGHTFDSSWSXXXXXXXXXXXXTAIRRYHQLRNEVQ 335
           +K +N  S G+IFVPLP  +PK+RVGHT D SWS              I R+H+LR EV+
Sbjct: 107 DKPANG-SAGEIFVPLPNQLPKHRVGHTIDQSWSLPENPVPEPGTGGVITRFHELRKEVK 165

Query: 334 VEKGKRRKVVENNVPSLAELKLSSNELKRLQSVGIKLKQKLKVGKAGITEGIVNGIHERW 155
            EK   RK  E   P+LAEL L   EL+RL+ +GI++++KLKVGKAGITEGIVNGIHERW
Sbjct: 166 REKKLVRKEDER-APTLAELTLPEEELRRLKGIGIQIRKKLKVGKAGITEGIVNGIHERW 224

Query: 154 RHTELVKIKCDDICRLNMKRTHVLLERKTGGLVIWRSGSNMIVYRGADYKY 2
           R  E+VKI+C+DIC+LNMKRTH +LERKTGGLVIWRSGS +I+YRGA+YKY
Sbjct: 225 RRAEVVKIRCEDICKLNMKRTHDILERKTGGLVIWRSGSYIILYRGANYKY 275


>emb|CAN81271.1| hypothetical protein VITISV_006146 [Vitis vinifera]
          Length = 1399

 Score =  237 bits (605), Expect = 3e-60
 Identities = 131/231 (56%), Positives = 163/231 (70%)
 Frame = -1

Query: 694 NQKLSRFPRVRASVTNTSTPLLPHSAIQRIAEKLRTLGFDNDDETSPPLPRQPADDDDNS 515
           N K S+F  +RAS  N     LP +AIQRIAEKLR+LG+ + DE+   L         +S
Sbjct: 251 NPKPSKFI-LRAS--NPDAQTLPKTAIQRIAEKLRSLGYVDGDESRKVL---------SS 298

Query: 514 NKISNAISPGQIFVPLPTDIPKYRVGHTFDSSWSXXXXXXXXXXXXTAIRRYHQLRNEVQ 335
           +K +N  S G+IFVPLP  +PK+RVGHT D SWS              I R+H+LR EV+
Sbjct: 299 DKPANG-SAGEIFVPLPNQLPKHRVGHTIDQSWSLPENPVPEPGTGGVITRFHELRKEVK 357

Query: 334 VEKGKRRKVVENNVPSLAELKLSSNELKRLQSVGIKLKQKLKVGKAGITEGIVNGIHERW 155
            EK   RK  E   P+LAEL L   EL+RL+ +GI++++KLKVGKAGITEGIVNGIHERW
Sbjct: 358 REKKLVRKEDER-APTLAELTLPEEELRRLKGIGIQIRKKLKVGKAGITEGIVNGIHERW 416

Query: 154 RHTELVKIKCDDICRLNMKRTHVLLERKTGGLVIWRSGSNMIVYRGADYKY 2
           R  E+VKI+C+DIC+LNMKRTH +LERKTGGLVIWRSGS +I+YRGA+YKY
Sbjct: 417 RRAEVVKIRCEDICKLNMKRTHDILERKTGGLVIWRSGSYIILYRGANYKY 467


>ref|XP_002300024.1| predicted protein [Populus trichocarpa] gi|222847282|gb|EEE84829.1|
           predicted protein [Populus trichocarpa]
          Length = 1012

 Score =  234 bits (598), Expect = 2e-59
 Identities = 126/232 (54%), Positives = 154/232 (66%)
 Frame = -1

Query: 697 NNQKLSRFPRVRASVTNTSTPLLPHSAIQRIAEKLRTLGFDNDDETSPPLPRQPADDDDN 518
           NN    +F    +S  N  T  LPHSAIQRIA+KLR+LGF  + ET              
Sbjct: 42  NNNPSLKFLVRSSSADNPQT--LPHSAIQRIADKLRSLGFTEETETKAQT---------- 89

Query: 517 SNKISNAISPGQIFVPLPTDIPKYRVGHTFDSSWSXXXXXXXXXXXXTAIRRYHQLRNEV 338
                   + G+IFVPLP  +PKYRVG T D SWS             AI RYH+LR EV
Sbjct: 90  --------TAGEIFVPLPNRLPKYRVGQTLDPSWSTPENPVPVPGSGKAISRYHELRREV 141

Query: 337 QVEKGKRRKVVENNVPSLAELKLSSNELKRLQSVGIKLKQKLKVGKAGITEGIVNGIHER 158
           + E+  ++   E  VPSLAEL L + EL+RL+++GI  K+KLKVGKAGITEGIVNGIHER
Sbjct: 142 KREREAKKG--EAKVPSLAELSLPNEELRRLRTIGIAEKRKLKVGKAGITEGIVNGIHER 199

Query: 157 WRHTELVKIKCDDICRLNMKRTHVLLERKTGGLVIWRSGSNMIVYRGADYKY 2
           WR +E+VKI C+D+CR+NMKRTH LLERKTGGLV+WR GS +++YRGADYKY
Sbjct: 200 WRRSEVVKIVCEDLCRMNMKRTHDLLERKTGGLVVWRVGSKIVLYRGADYKY 251


>ref|XP_004164655.1| PREDICTED: LOW QUALITY PROTEIN: chloroplastic group IIA intron
           splicing facilitator CRS1, chloroplastic-like [Cucumis
           sativus]
          Length = 1053

 Score =  233 bits (594), Expect = 5e-59
 Identities = 123/213 (57%), Positives = 147/213 (69%), Gaps = 3/213 (1%)
 Frame = -1

Query: 631 LPHSAIQRIAEKLRTLGFDNDDETSPPLPRQPADDDDNSNKISNAISPGQIFVPLPTDIP 452
           LP SAIQRIA+KLR+LGF      + P P  P+             +PG IFVPLP  +P
Sbjct: 74  LPKSAIQRIADKLRSLGFTEXTPRTLPDPNSPS-------------APGAIFVPLPNQLP 120

Query: 451 KYRVGHTFDSSWSXXXXXXXXXXXXTAIRRYHQLRNEVQVEK---GKRRKVVENNVPSLA 281
           KYRVGHT DSSWS            TAI+R+H+LR EVQ  K   G R K  E   PSLA
Sbjct: 121 KYRVGHTIDSSWSTPENPVPEPGTGTAIKRFHELRGEVQKWKKRDGVREKKREERAPSLA 180

Query: 280 ELKLSSNELKRLQSVGIKLKQKLKVGKAGITEGIVNGIHERWRHTELVKIKCDDICRLNM 101
           EL L+  EL RL+++GI+LK+KL VGKAGITEGIVN IHE WR +E+VKI C+D+CRLNM
Sbjct: 181 ELSLTEEELGRLRTIGIRLKKKLNVGKAGITEGIVNTIHEFWRRSEVVKIACEDLCRLNM 240

Query: 100 KRTHVLLERKTGGLVIWRSGSNMIVYRGADYKY 2
           KRTH LLERKTGG+V+WRSGS +I+YRG +Y Y
Sbjct: 241 KRTHDLLERKTGGIVVWRSGSKIILYRGPNYIY 273


Top