BLASTX nr result
ID: Angelica23_contig00015402
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Angelica23_contig00015402
(2027 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002321509.1| high mobility group family [Populus trichoca... 144 9e-32
emb|CAA15421.1| HMR1 protein [Antirrhinum majus] 137 1e-29
ref|XP_002534496.1| histone h1/h5, putative [Ricinus communis] g... 130 1e-27
ref|XP_003634203.1| PREDICTED: uncharacterized protein LOC100853... 117 9e-24
ref|NP_001236260.1| HMG I/Y like protein [Glycine max] gi|157062... 112 5e-22
>ref|XP_002321509.1| high mobility group family [Populus trichocarpa]
gi|118481017|gb|ABK92462.1| unknown [Populus trichocarpa]
gi|118487368|gb|ABK95512.1| unknown [Populus trichocarpa]
gi|222868505|gb|EEF05636.1| high mobility group family
[Populus trichocarpa]
Length = 478
Score = 144 bits (363), Expect = 9e-32
Identities = 154/497 (30%), Positives = 206/497 (41%), Gaps = 36/497 (7%)
Frame = -3
Query: 1947 MEFPPSDPSTFVPVNNYAPSANYAPPVNYALPANYTTTTAYDNQPV---VQSFNHPSYEE 1777
M+ PP P+ +P PP A+P+ TT T P+ + PSY E
Sbjct: 1 MDPPPPSLLIHPPLPPSSP-----PPPTTAIPS--TTETIPHLAPLPNPAPAVTQPSYAE 53
Query: 1776 MIRSAIVALNEKDGSSRQAIAKYIESNFKIVPSQTHGYELTQQLKRMKNSGQLVLNKHSY 1597
MI SAI AL E+DGSSR AIAKYIE + +PS H LT LKR+KNSG LVLNK SY
Sbjct: 54 MIYSAITALKEQDGSSRIAIAKYIERAYPGLPS-NHSDLLTHHLKRLKNSGALVLNKKSY 112
Query: 1596 MFPGSMTVPAASVNSASGYDGMSQGPVQVLDGI-----------KRRPGRPPKLQPNG-- 1456
M P S ++ N + +S P Q+ KR GRPPK + NG
Sbjct: 113 MLPRS----DSNANITTTTPTVSTSPTQIQPQYAVPVSSAPPEQKRGRGRPPKAKLNGLT 168
Query: 1455 --------GLMGSSGQQVNVGLENQQVGGASGFGVPASNLFLGLTSGELQFVGVNGXXXX 1300
+G +NVG+ Q + + GF + ++ + G + V V
Sbjct: 169 PTPAPVLANGQAQTGLGLNVGVTAQPL--SVGFPIDPTSSTVKKGRGRPKKVAVT----- 221
Query: 1299 XXXXXXXXXXXXXXXXXXXXSNAPTAVSNG-GAMYDAGAVANVV----PLEQSDVAPVKR 1135
P AV+ G G G + + P + + K+
Sbjct: 222 --------------------EAGPLAVNKGKGRPPKTGPLGSKKSPGRPRKPKSLVDAKK 261
Query: 1134 GRGRPRKAQTSAVGVESGAIVVSA---GEDAAAQNNVGDGAPAVTPPMVLGKRRRGRPAK 964
G GRP K Q V V +A DAAA NVG P RGRP K
Sbjct: 262 GPGRPPKNQLKPVTVPYAVAAPTATAIATDAAAMFNVGSPRP------------RGRPRK 309
Query: 963 LDTMATGLVVNRGTKEQGGQAMVPVEGKRGRGRPRXXXXXXXXXXXXXXXXXXXXXXXVS 784
+A G V V+ KR GRP S
Sbjct: 310 GAALAA-----------AGVGAVVVQAKR-PGRP-----------PKLPVIMKPKPKKSS 346
Query: 783 GKPLGRSRKNA----LQTASLMSEMQLMAYEGLKARVEHYQSRIRTAISVVKPYLNETAV 616
G+P+GR RKNA T + + Q + LK ++E +QSR++ AI V+KP+L +
Sbjct: 347 GRPVGRPRKNANAPWAITRASEPQAQAELHGDLKRKLEFFQSRVKQAIGVLKPHLTSATI 406
Query: 615 IGLGALQDLEELASMDI 565
+ A+Q+LE LASMDI
Sbjct: 407 SAVAAIQELEGLASMDI 423
>emb|CAA15421.1| HMR1 protein [Antirrhinum majus]
Length = 400
Score = 137 bits (344), Expect = 1e-29
Identities = 136/462 (29%), Positives = 186/462 (40%), Gaps = 14/462 (3%)
Frame = -3
Query: 1911 PVNNYAPSANYAPPVNYALPANYTTTTAYDNQPVVQ-------SFNHPSYEEMIRSAIVA 1753
P P+ APPV +P TT A PV + NHP Y EMI SAI A
Sbjct: 7 PQQQLDPAPQAAPPVPVPVPT--TTAEAPIPNPVANPTPKRAPAHNHPPYAEMITSAISA 64
Query: 1752 LNEKDGSSRQAIAKYIESNFKIVPSQTHGYELTQQLKRMKNSGQLVLNKHSYMFPGSMTV 1573
LNE++GSS++AIAKY+ESNF +P+ TH L LKR+K++G +++ KHSY P S
Sbjct: 65 LNERNGSSKRAIAKYVESNFTGLPA-THASLLATHLKRLKDTGDILMVKHSYKLPRS--- 120
Query: 1572 PAASVNSASGYDGMSQGPVQVLDGIKRRPGRPPKLQPNGGLMGSSGQQVNVGLENQQVGG 1393
S G V KRRPGRP K P + V V +
Sbjct: 121 ------------APSNGAVSADPSTKRRPGRPRKDNPQ-----NLQAAVPVFAPQVDINA 163
Query: 1392 ASGFGVPASNLFLGLTSGELQFVGVNGXXXXXXXXXXXXXXXXXXXXXXXXSNAPTAVSN 1213
A V ++++ L +NG A +
Sbjct: 164 APEIAVEQGSVYVELGP-------INGPSPPRGRGRPPKQGGRGRGRGRPPKTAVAPPAA 216
Query: 1212 GGAMYDAGAVANVVPLEQSDVAPVKRGRGRPRKAQTSAVG-VESGAIVVSAGEDAAAQNN 1036
A A V P Q +G GRPR + VE GA+ A
Sbjct: 217 AAAAVPGAPAAAVAPAAQ------VKGPGRPRGRPPKPINVVEGGAVAAPVAVPAGGVLP 270
Query: 1035 VGDGAPAVTPPMVLGKRRRGRPAKLDTMATGLVVNRGTKEQGGQAMVP-----VEGKRGR 871
V G+ + +RRGRP K GG+A P V+ K R
Sbjct: 271 VAGGSVVAG----VAPKRRGRPPK----------------AGGEAKKPRLQTVVKPKTPR 310
Query: 870 GRPRXXXXXXXXXXXXXXXXXXXXXXXVSGKPLGRSRKNALQTASLMSEMQLM-AYEGLK 694
+SGKPLGR +KNA S +++ QL+ AY LK
Sbjct: 311 --------------------------KLSGKPLGRPKKNAAAAVSQVADTQLLVAYLDLK 344
Query: 693 ARVEHYQSRIRTAISVVKPYLNETAVIGLGALQDLEELASMD 568
++E+ QSR++ A +V+KP L T + A Q+LE LA+++
Sbjct: 345 GKLENLQSRVKLAANVIKPCL--TTEDAVNAFQELEMLATLN 384
>ref|XP_002534496.1| histone h1/h5, putative [Ricinus communis]
gi|223525178|gb|EEF27887.1| histone h1/h5, putative
[Ricinus communis]
Length = 435
Score = 130 bits (327), Expect = 1e-27
Identities = 151/468 (32%), Positives = 204/468 (43%), Gaps = 38/468 (8%)
Frame = -3
Query: 1878 APPVNYALPA--NYTTTTAYDNQPVV-QSFNHPSYEEMIRSAIVALNEKDGSSRQAIAKY 1708
+PPV A N+ A P V QSFNHP Y +MI +AI AL E+DGSS++AIAKY
Sbjct: 38 SPPVTAEAAAAHNHVAHAANATAPTVAQSFNHPPYTDMIYAAITALKERDGSSKRAIAKY 97
Query: 1707 IESNFKIVPSQTHGYELTQQLKRMKNSGQLVLNKHSYMFPGS-MTVPAASVNS------- 1552
IE + +P TH LT LKR+KN+G LV+ K SY P S TV ++NS
Sbjct: 98 IERVYPGLP-PTHSALLTHHLKRLKNTGLLVMVKKSYKLPRSDDTVATNNINSSTSNNIN 156
Query: 1551 ASGYDGMSQGPVQVLDGIKRRPGRPPKLQPNGGLMGSSGQ------------QVNVGLEN 1408
A G+ + P G KR GRPPK +P ++ SS Q V + +
Sbjct: 157 AVGHSALPPNPAVTNSGPKRGRGRPPKPKPE--VVPSSIQPISQPNAASVMVPVGLSIST 214
Query: 1407 QQVGGASGFGVPASNLFLGLTSGELQFVGVNGXXXXXXXXXXXXXXXXXXXXXXXXSNAP 1228
Q + A PA+ + G+ Q +GV P
Sbjct: 215 QPINSA-----PAATVIQPPNVGQPQ-MGVK-----------------------RGRGRP 245
Query: 1227 TAVSNGGAMYDAGAVANVVPLEQSDVAPVKRGR-----GRPRKAQT-SAVGVESG----- 1081
V+ GGA A AV + +RGR GRP+K ++ A GV+ G
Sbjct: 246 KKVAGGGA---AAAV----------LGGKRRGRPPKSAGRPKKLKSVGANGVKKGPKRLP 292
Query: 1080 -AIVVSAGEDAAAQNNVGDGAPAVTPPMVLGKRRRGRPAKLDTMATGLVVNRGTKEQGGQ 904
++VV AAA AVT R RGRP K A V G GG
Sbjct: 293 KSVVVPYATGAAA---------AVT------ARPRGRPKKGAAPAAAPGVG-GVVGIGGA 336
Query: 903 AMVPVEGKRGRGRPRXXXXXXXXXXXXXXXXXXXXXXXVSGKPLGRSRK--NALQTASLM 730
+VP GKR GRP +P+GR +K N A+
Sbjct: 337 VVVP--GKRA-GRP--------------PKVVGGVVVNPKKRPVGRPKKNDNVSWAAAQA 379
Query: 729 SEMQLMAYEGLKARVEHYQSRIRTAISVVKPYL-NETAVIGLGALQDL 589
S++Q AY LK + E +QS++R A+ V++P L NET + + A+Q+L
Sbjct: 380 SQLQSEAYGDLKMKFEFFQSKVRQAVGVLRPQLTNETPISVVAAIQEL 427
>ref|XP_003634203.1| PREDICTED: uncharacterized protein LOC100853898 [Vitis vinifera]
gi|147815426|emb|CAN74749.1| hypothetical protein
VITISV_021497 [Vitis vinifera]
gi|297734307|emb|CBI15554.3| unnamed protein product
[Vitis vinifera]
Length = 355
Score = 117 bits (294), Expect = 9e-24
Identities = 140/469 (29%), Positives = 178/469 (37%), Gaps = 16/469 (3%)
Frame = -3
Query: 1896 APSANYAPPVNYALPANYTTTTAYDNQPVVQS---FNHPSYEEMIRSAIVALNEKDGSSR 1726
AP PP PA A+ P NHP Y EMI +AI ALNE+ GSS+
Sbjct: 4 APPPPLPPPPPPQPPAASEAHVAHAANPTPSHGPPHNHPPYAEMITTAIGALNERTGSSK 63
Query: 1725 QAIAKYIESNFKIVPSQTHGYELTQQLKRMKNSGQLVLNKHSYMFPGSMTVPAASVNSAS 1546
+AIAKYIE F +P +H LT LKR+++SGQ+V+ KHSYM P S
Sbjct: 64 KAIAKYIERTFGDLP-PSHPALLTHHLKRLRSSGQVVMVKHSYMLP------------RS 110
Query: 1545 GYDG----MSQGPVQVLDGIKRRPGRPPK----LQPNGGLMGSSGQQVNVGLENQQVGGA 1390
G D + GPV G KR GRPPK +QP S V VGL + V
Sbjct: 111 GDDAHALPLHPGPV---SGPKRGRGRPPKPKIPVQPT-----SESVLVAVGLVDGPVVPK 162
Query: 1389 SGFGVPASNLFLGLTSGELQFVGVNGXXXXXXXXXXXXXXXXXXXXXXXXSNAPTAVSNG 1210
G G P SG GV G V G
Sbjct: 163 RGPGRPPK-------SG-----GVRGPRPKSLDGPKRRPGRPPKAQLG-------GVIPG 203
Query: 1209 GAMYDAGAVANVVPLEQSDVAPVKRGRGRPRKAQTSAVGVESGAIVVSAGEDAAAQNNVG 1030
G + A V ++ S R RGRP K T GV G
Sbjct: 204 GVPRERPRTAGVTKVKVSG-----RPRGRPPKILTVGAGVGGG----------------- 241
Query: 1029 DGAPAVTPPMVLGKRRRGRPAKLDTMATGLVVNRGTKEQGGQAMVPVEGKRGRGRPRXXX 850
L +RRGRP K D P K+ GRP
Sbjct: 242 -----------LSVKRRGRPPKADG--------------------PKRPKKLTGRP---- 266
Query: 849 XXXXXXXXXXXXXXXXXXXXVSGKPLGRSRK-----NALQTASLMSEMQLMAYEGLKARV 685
+GR RK L AS + M YE LK ++
Sbjct: 267 -------------------------VGRPRKKLATGEILPAASEQPVAEWMNYEDLKQKL 301
Query: 684 EHYQSRIRTAISVVKPYLNETAVIGLGALQDLEELASMDIVSVQLSVQG 538
EH Q +I+ ++ V++ +E V + ALQ+LE+LA+MDI S L+++G
Sbjct: 302 EHIQGKIKLSVGVLRTQFSENNVSAMSALQELEDLATMDI-SAPLNIEG 349
>ref|NP_001236260.1| HMG I/Y like protein [Glycine max] gi|15706274|emb|CAC69997.1| HMG
I/Y like protein [Glycine max]
Length = 413
Score = 112 bits (279), Expect = 5e-22
Identities = 132/485 (27%), Positives = 191/485 (39%), Gaps = 28/485 (5%)
Frame = -3
Query: 1935 PSDPSTFVPVNNYAPSANYAPPVNYALPANYTTTTAYDNQPVVQSFNHPSYEEMIRSAIV 1756
P P+T VP P N+ PA+ T T NHP Y+EMI +AI
Sbjct: 7 PPPPATTVPFT--------VEPSNHVTPADNTNT------------NHPPYDEMIYTAIG 46
Query: 1755 ALNEKDGSSRQAIAKYIESNFKIVPSQTHGYELTQQLKRMKNSGQLVLNKHSYMFPGSMT 1576
AL EKDGSS++AI KY+E +K +P TH LT L R+K++G L+L K SY PGS
Sbjct: 47 ALKEKDGSSKRAIGKYMEQVYKDLP-PTHSALLTHHLNRLKSAGLLILVKKSYKLPGSDP 105
Query: 1575 VPAASVNSASG--------------YDGMSQGPVQVLDGIKRRPGRPPKLQPNGGLMGSS 1438
+P G + ++ L KR PGRP K+ G +G S
Sbjct: 106 LPVLQAQKPRGRPPKLKSQPNTELTWPALALNDNPALQSAKRGPGRPKKI---AGPVGVS 162
Query: 1437 GQQVNVGLENQQVG-GASGF----GVPASNLFLGLTSGELQFVGVNGXXXXXXXXXXXXX 1273
+ G + G G S G P + S L+
Sbjct: 163 PGPMVPGRRGRPPGTGRSKLPKRPGRPPKPKSVSAISSGLK------------------- 203
Query: 1272 XXXXXXXXXXXSNAPTAVSNGGAMYDAGAVANVVPLEQSDVAPVK------RGRGRPRKA 1111
P A SN + A VA +P Q V R RGRP+K
Sbjct: 204 --------RRPGRPPKAESNVNVIPFAAPVAPGLPTVQPIVPTASVPNGSPRPRGRPKK- 254
Query: 1110 QTSAVGVESGAIVVSAGEDAAAQNNVGDGAP--AVTPPMVLGKRRRGRPAKLDTMATGLV 937
+ AG A A ++VG GAP P VL R GRP KL
Sbjct: 255 -------------IVAGAGAPALSSVG-GAPRGRGRPRGVLPLVRPGRPQKLAV------ 294
Query: 936 VNRGTKEQGGQAMVPVEGKRGRGRPRXXXXXXXXXXXXXXXXXXXXXXXVSGKPLGRSRK 757
GRP+ + +P+GR +
Sbjct: 295 ----------------------GRPK----------------------NPARRPVGRPKG 310
Query: 756 NALQTASLMSEMQLMAYEGLKARVEHYQSRIRTAISVVKPYLN-ETAVIGLGALQDLEEL 580
+ TA+ ++ + A + L+ ++EH+QS+++ ++ +KPY N E+ V + A+Q+LE L
Sbjct: 311 S---TAAAITAHK-AANDDLRRKLEHFQSKVKESLGTLKPYFNHESPVTAIAAIQELEVL 366
Query: 579 ASMDI 565
+++D+
Sbjct: 367 STLDL 371