BLASTX nr result
ID: Angelica23_contig00015318
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Angelica23_contig00015318
(1599 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_003634559.1| PREDICTED: pentatricopeptide repeat-containi... 177 5e-42
emb|CAN75781.1| hypothetical protein VITISV_012425 [Vitis vinifera] 177 5e-42
emb|CBI18522.3| unnamed protein product [Vitis vinifera] 169 2e-39
ref|XP_002518234.1| pentatricopeptide repeat-containing protein,... 157 8e-36
gb|ABD28636.1| Tetratricopeptide-like helical [Medicago truncatula] 156 1e-35
>ref|XP_003634559.1| PREDICTED: pentatricopeptide repeat-containing protein At5g57250,
mitochondrial-like [Vitis vinifera]
Length = 993
Score = 177 bits (450), Expect = 5e-42
Identities = 101/226 (44%), Positives = 140/226 (61%), Gaps = 14/226 (6%)
Frame = +2
Query: 2 LNLEDKGLKPDEFTVSAVVNCCYHIGDMEKALKLFFELKSKGVLPDFLGFVFLVRGLCSK 181
++L+ + +KPDEFTVSA++N H GDME AL FFE K K +LPDFLGF++LVRGLC+K
Sbjct: 768 IDLKARCIKPDEFTVSALINGYCHKGDMEGALGFFFEFKKKDILPDFLGFMYLVRGLCAK 827
Query: 182 GRMEESRSIIREMLQAPSVINLLKEVEINFKTESMEHLLSFLCDQGRIQEANTVLNEVAS 361
GRMEE+R I+REMLQ SV+ L+ V+ +TES+E + LC+QG IQEA TVLNEV S
Sbjct: 828 GRMEEARGILREMLQTRSVLELINRVDTEIETESVESFIISLCEQGSIQEAVTVLNEVGS 887
Query: 362 VFFPL-------------EKFGAQSISKSFVSQCSISNDETYLELKTYNEVELDKVVHRH 502
+FFP+ EK + S+ S N + L++ N +++ VV +
Sbjct: 888 IFFPIGRRCRPQNRAEKEEKIYEGVTFGAVSSKHSSLNHKMDLDVGLSNVKKVEMVVDDY 947
Query: 503 NYLDKESLRKDFDSYCDLMTLFCSRGELQKANNLAKVLTCSVG-GC 637
+ +K S DF+SY L+ CSRGEL +AN + + + GC
Sbjct: 948 DNSEKGSRVPDFESYYSLIASLCSRGELLEANRKTRQMLLDMDTGC 993
>emb|CAN75781.1| hypothetical protein VITISV_012425 [Vitis vinifera]
Length = 993
Score = 177 bits (450), Expect = 5e-42
Identities = 101/226 (44%), Positives = 140/226 (61%), Gaps = 14/226 (6%)
Frame = +2
Query: 2 LNLEDKGLKPDEFTVSAVVNCCYHIGDMEKALKLFFELKSKGVLPDFLGFVFLVRGLCSK 181
++L+ + +KPDEFTVSA++N H GDME AL FFE K K +LPDFLGF++LVRGLC+K
Sbjct: 768 IDLKARCIKPDEFTVSALINGYCHKGDMEGALGFFFEFKKKDILPDFLGFMYLVRGLCAK 827
Query: 182 GRMEESRSIIREMLQAPSVINLLKEVEINFKTESMEHLLSFLCDQGRIQEANTVLNEVAS 361
GRMEE+R I+REMLQ SV+ L+ V+ +TES+E + LC+QG IQEA TVLNEV S
Sbjct: 828 GRMEEARGILREMLQTRSVLELINRVDTEIETESVESFIISLCEQGSIQEAVTVLNEVGS 887
Query: 362 VFFPL-------------EKFGAQSISKSFVSQCSISNDETYLELKTYNEVELDKVVHRH 502
+FFP+ EK + S+ S N + L++ N +++ VV +
Sbjct: 888 IFFPIGRRCRPQNRAEKEEKIYEGVTFGAVSSKHSSLNHKMDLDVGLSNVKKVEMVVDDY 947
Query: 503 NYLDKESLRKDFDSYCDLMTLFCSRGELQKANNLAKVLTCSVG-GC 637
+ +K S DF+SY L+ CSRGEL +AN + + + GC
Sbjct: 948 DNSEKGSRVPDFESYYSLIASLCSRGELLEANRKTRQMLLDMDTGC 993
>emb|CBI18522.3| unnamed protein product [Vitis vinifera]
Length = 808
Score = 169 bits (428), Expect = 2e-39
Identities = 95/213 (44%), Positives = 128/213 (60%), Gaps = 1/213 (0%)
Frame = +2
Query: 2 LNLEDKGLKPDEFTVSAVVNCCYHIGDMEKALKLFFELKSKGVLPDFLGFVFLVRGLCSK 181
++L+ + +KPDEFTVSA++N H GDME AL FFE K K +LPDFLGF++LVRGLC+K
Sbjct: 623 IDLKARCIKPDEFTVSALINGYCHKGDMEGALGFFFEFKKKDILPDFLGFMYLVRGLCAK 682
Query: 182 GRMEESRSIIREMLQAPSVINLLKEVEINFKTESMEHLLSFLCDQGRIQEANTVLNEVAS 361
GRMEE+R I+REMLQ SV+ L+ V+ +TES+E + LC+QG IQEA TVLNEV S
Sbjct: 683 GRMEEARGILREMLQTRSVLELINRVDTEIETESVESFIISLCEQGSIQEAVTVLNEVGS 742
Query: 362 VFFPLEKFGAQSISKSFVSQCSISNDETYLELKTYNEVELDKVVHRHNYLDKESLRKDFD 541
+FFP+ + + N E ++ + Y K S DF+
Sbjct: 743 IFFPIGR-----------------------RCRPQNRAEKEEKI----YEGKGSRVPDFE 775
Query: 542 SYCDLMTLFCSRGELQKANNLAKVLTCSVG-GC 637
SY L+ CSRGEL +AN + + + GC
Sbjct: 776 SYYSLIASLCSRGELLEANRKTRQMLLDMDTGC 808
>ref|XP_002518234.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223542581|gb|EEF44120.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 932
Score = 157 bits (397), Expect = 8e-36
Identities = 86/178 (48%), Positives = 118/178 (66%)
Frame = +2
Query: 77 GDMEKALKLFFELKSKGVLPDFLGFVFLVRGLCSKGRMEESRSIIREMLQAPSVINLLKE 256
GDME AL+ F E K KG+ PDFLGF++L+RGLC KGRMEE+R+I+REMLQ+ SV+ LL +
Sbjct: 754 GDMEGALRFFLEYKQKGISPDFLGFLYLIRGLCGKGRMEEARNILREMLQSQSVMELLNK 813
Query: 257 VEINFKTESMEHLLSFLCDQGRIQEANTVLNEVASVFFPLEKFGAQSISKSFVSQCSISN 436
V +TES+E L FLC++G I+EA VLNE+ S+FFP++K+ + S S+S S
Sbjct: 814 VNTEVETESIESFLLFLCEKGSIKEAVAVLNEIGSLFFPVQKWSSPSESQSLQS------ 867
Query: 437 DETYLELKTYNEVELDKVVHRHNYLDKESLRKDFDSYCDLMTLFCSRGELQKANNLAK 610
L L + + E+D+VV + L ES F SY ++ CS+GEL +AN AK
Sbjct: 868 --ANLSLASCDATEVDEVVETSDDLG-ESKFNCFASYYSVIASLCSKGELGEANRFAK 922
>gb|ABD28636.1| Tetratricopeptide-like helical [Medicago truncatula]
Length = 1053
Score = 156 bits (395), Expect = 1e-35
Identities = 90/217 (41%), Positives = 132/217 (60%), Gaps = 15/217 (6%)
Frame = +2
Query: 5 NLEDKGLKPDEFTVSAVVNCCYHIGDMEKALKLFFELKSKGVLPDFLGFVFLVRGLCSKG 184
++E + +K D FTVS+V+NC GDME AL+ +++ K K + PDFLGF++++RGLC+KG
Sbjct: 827 DMEKQYIKFDNFTVSSVINCYCQKGDMEGALEFYYKFKGKDISPDFLGFLYMIRGLCTKG 886
Query: 185 RMEESRSIIREMLQAPSVINLLKEVEINFKTESMEHLLSFLCDQGRIQEANTVLNEVASV 364
RMEE+RS++REMLQ+ +V ++ V TES+ ++ LCDQGRIQEA VLN +AS
Sbjct: 887 RMEETRSVLREMLQSKNVAEMINIVNSRVDTESICDFIAALCDQGRIQEAVKVLNLIASE 946
Query: 365 FFPLEKFGA---QSISKSFVSQCSIS-NDETYLELKTYNEVELD-----------KVVHR 499
FFP ++ Q KS S S+ ++ L +Y E LD + +
Sbjct: 947 FFPAQRSSTCNNQGSDKSHKSYESVDIGSKSSTSLLSYCESGLDFESCDTRDKRNHMTNN 1006
Query: 500 HNYLDKESLRKDFDSYCDLMTLFCSRGELQKANNLAK 610
++L K LR +FD Y + C++G+LQ AN LAK
Sbjct: 1007 DSHLKKSRLR-NFDFYYSRIAALCTKGDLQDANELAK 1042