BLASTX nr result

ID: Angelica23_contig00015317 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica23_contig00015317
         (443 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002308787.1| f-box family protein [Populus trichocarpa] g...   101   7e-20
ref|XP_002532719.1| ubiquitin-protein ligase, putative [Ricinus ...    93   3e-17
ref|XP_002322522.1| predicted protein [Populus trichocarpa] gi|2...    88   8e-16
ref|XP_004139617.1| PREDICTED: F-box protein CPR30-like [Cucumis...    87   2e-15
ref|XP_002297705.1| predicted protein [Populus trichocarpa] gi|2...    86   3e-15

>ref|XP_002308787.1| f-box family protein [Populus trichocarpa]
           gi|222854763|gb|EEE92310.1| f-box family protein
           [Populus trichocarpa]
          Length = 396

 Score =  101 bits (251), Expect = 7e-20
 Identities = 57/139 (41%), Positives = 74/139 (53%), Gaps = 1/139 (0%)
 Frame = -3

Query: 414 VGIYSLKSDSWRRLDYCPFCFAISYFMPAPRGVFVEGSLH*LVNKKLSRGIARIY-AFHV 238
           V +YSL+  SWRR+   P+C  + Y  P   GVF  G+LH +V +     +A I  A  +
Sbjct: 180 VKVYSLRKQSWRRIGDMPYC--VHY--PGANGVFANGALHWVVGENPESNVANIVVALDL 235

Query: 237 GTEKYHVVPHPPFSDMSFLGTLDQPGGKLCLICSYDKSHMDVWAMDSYGVKESWTKLFSV 58
           G E Y  V  P + D +F   L    G LC + ++    +DVW M  YGVKESWTKLFSV
Sbjct: 236 GVEDYREVLQPEYKDKNFYIDLGVLRGCLCFLANFLGERVDVWMMKEYGVKESWTKLFSV 295

Query: 57  AQYVDASKFEFPTPITYSK 1
           AQY          P+ YSK
Sbjct: 296 AQYEVIGFLRSLKPLAYSK 314


>ref|XP_002532719.1| ubiquitin-protein ligase, putative [Ricinus communis]
           gi|223527546|gb|EEF29668.1| ubiquitin-protein ligase,
           putative [Ricinus communis]
          Length = 389

 Score = 92.8 bits (229), Expect = 3e-17
 Identities = 53/139 (38%), Positives = 74/139 (53%), Gaps = 1/139 (0%)
 Frame = -3

Query: 414 VGIYSLKSDSWRRLDYCPFCFAISYFMPAPRGVFVEGSLH*LVNKKLSRGIA-RIYAFHV 238
           V ++SL+ +SWRR+   P+C       P   G++  G+LH LV++     +A  I A  +
Sbjct: 173 VKVFSLRKNSWRRIADMPYCV----LYPGENGIYANGALHWLVSQDPDSTVADTIVALDL 228

Query: 237 GTEKYHVVPHPPFSDMSFLGTLDQPGGKLCLICSYDKSHMDVWAMDSYGVKESWTKLFSV 58
           G E YHVVP P F DM+    +    G L L+       +DVW M+ Y VKESW+KLFSV
Sbjct: 229 GVEDYHVVPKPEFVDMNCNMGVGVLQGCLSLLAYARSERVDVWVMEEYMVKESWSKLFSV 288

Query: 57  AQYVDASKFEFPTPITYSK 1
           A+           P+ YSK
Sbjct: 289 ARLEVIGILRSLKPLAYSK 307


>ref|XP_002322522.1| predicted protein [Populus trichocarpa] gi|222867152|gb|EEF04283.1|
           predicted protein [Populus trichocarpa]
          Length = 419

 Score = 87.8 bits (216), Expect = 8e-16
 Identities = 50/147 (34%), Positives = 78/147 (53%), Gaps = 9/147 (6%)
 Frame = -3

Query: 414 VGIYSLKSDSWRRLDYCPFCFAI---SYFMPAPR---GVFVEGSLH*LVNKKLSRGIAR- 256
           V +YSLK+D W++++  P C  +    +F    R   GVF   +LH ++ ++   GI   
Sbjct: 185 VRVYSLKNDKWKKIEDLPICLKLLSKQFFHVLHRRGYGVFAGHALHWIIPQRRQLGIRDC 244

Query: 255 IYAFHVGTEKYHVVPHPPFSD--MSFLGTLDQPGGKLCLICSYDKSHMDVWAMDSYGVKE 82
           +  F +  +K+  +P P +    MSF   +    G LC++C+Y+   +DVW M  YG+KE
Sbjct: 245 VLGFDIRNDKFFELPQPNYESKGMSFQVDVGVLEGNLCVMCNYEYVCVDVWVMREYGMKE 304

Query: 81  SWTKLFSVAQYVDASKFEFPTPITYSK 1
           SW K+FSV        F F  P+ YSK
Sbjct: 305 SWCKMFSVQGIKWIGAFMFLRPLIYSK 331


>ref|XP_004139617.1| PREDICTED: F-box protein CPR30-like [Cucumis sativus]
           gi|449508988|ref|XP_004163461.1| PREDICTED: F-box
           protein CPR30-like [Cucumis sativus]
          Length = 179

 Score = 86.7 bits (213), Expect = 2e-15
 Identities = 44/108 (40%), Positives = 64/108 (59%), Gaps = 1/108 (0%)
 Frame = -3

Query: 321 GVFVEGSLH*LVNKKLSRGIAR-IYAFHVGTEKYHVVPHPPFSDMSFLGTLDQPGGKLCL 145
           GVFV  +LH +V++ L  G+A  + AF +GT ++  +P P  +D      +D  GG LCL
Sbjct: 2   GVFVNNALHWVVSENLGMGLADLVVAFDLGTGRFEEIPLPELTDFKCEIHVDVLGGCLCL 61

Query: 144 ICSYDKSHMDVWAMDSYGVKESWTKLFSVAQYVDASKFEFPTPITYSK 1
           I +YD+   +VW M  YGV+ESW KL +V+Q       +   P+TYSK
Sbjct: 62  IANYDRVRFEVWVMKEYGVQESWMKLLTVSQVDFVGSIKSVKPLTYSK 109


>ref|XP_002297705.1| predicted protein [Populus trichocarpa] gi|222844963|gb|EEE82510.1|
           predicted protein [Populus trichocarpa]
          Length = 408

 Score = 85.9 bits (211), Expect = 3e-15
 Identities = 51/150 (34%), Positives = 78/150 (52%), Gaps = 12/150 (8%)
 Frame = -3

Query: 414 VGIYSLKSDSWRRLDYCPFCFAISYFMPA---PR-----GVFVEGSLH*---LVNKKLSR 268
           V +YSLKS+SW+R+D  P+   + + +P    PR     GVF   ++H    +V K    
Sbjct: 178 VKVYSLKSNSWKRIDDYPY--DLRFILPPDYHPRCRRGYGVFANSAVHWKATVVGKGKEN 235

Query: 267 GIARIYAFHVGTEKYHVVPHPPFSDMSFLGTLDQPGGKLCLICSYDKSHMDVWAMDSYGV 88
           G   I AF +G E++ ++P P +S       +   GG LC+ C+ +   +++W M  YGV
Sbjct: 236 GSDLIVAFDLGAEEFKIIPQPDYSSNEHEMNVGVLGGCLCVFCNKNCKQVEIWVMKEYGV 295

Query: 87  KESWTKLFSVAQYVDASKFEF-PTPITYSK 1
           KESWT L +V   +    F     P+ YSK
Sbjct: 296 KESWTHLCTVIAQLQVKAFWLHARPLAYSK 325


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