BLASTX nr result

ID: Angelica23_contig00015313 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica23_contig00015313
         (739 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004140162.1| PREDICTED: DNA polymerase epsilon subunit 3-...   130   3e-28
ref|NP_001149275.1| DNA polymerase epsilon subunit 3 [Zea mays] ...   127   2e-27
gb|AFK43246.1| unknown [Lotus japonicus]                              127   2e-27
ref|NP_001237961.1| uncharacterized protein LOC100306382 [Glycin...   127   3e-27
ref|XP_002275482.1| PREDICTED: nuclear transcription factor Y su...   125   1e-26

>ref|XP_004140162.1| PREDICTED: DNA polymerase epsilon subunit 3-like [Cucumis sativus]
          Length = 160

 Score =  130 bits (327), Expect = 3e-28
 Identities = 73/140 (52%), Positives = 94/140 (67%), Gaps = 7/140 (5%)
 Frame = -1

Query: 712 EKVTGGAVDDLPNSMVRRLVKDKLGE------ISVLREALDAFSESSRIFIHYLSAAAND 551
           EK  GG  ++LP ++VRR+VK+KL +      ISV +++L AF ES+RIFIHYLSA AND
Sbjct: 2   EKKIGGGNEELPKTIVRRVVKEKLSQCSRDQDISVNKDSLLAFCESARIFIHYLSATAND 61

Query: 550 ICKESNRQTLTAEDVFKALDDIEFSEFVAPLRASLQDFRQKNAVKR-XXXXXXXXXXXXX 374
           ICKES RQT+ AEDV KAL+D+EF E V PL+ASL +FR+KNA K+              
Sbjct: 62  ICKESKRQTIKAEDVLKALEDMEFPELVRPLKASLDEFRRKNAGKKAAASREKEAKKKRK 121

Query: 373 KEIPTKDGTEEEQNSDEGNE 314
            E PT +GT+ E   D GN+
Sbjct: 122 VEEPTVEGTDGESIDDVGND 141


>ref|NP_001149275.1| DNA polymerase epsilon subunit 3 [Zea mays]
           gi|195625970|gb|ACG34815.1| DNA polymerase epsilon
           subunit 3 [Zea mays] gi|195628668|gb|ACG36164.1| DNA
           polymerase epsilon subunit 3 [Zea mays]
           gi|223942345|gb|ACN25256.1| unknown [Zea mays]
           gi|414884763|tpg|DAA60777.1| TPA: DNA polymerase epsilon
           subunit 3 [Zea mays]
          Length = 175

 Score =  127 bits (320), Expect = 2e-27
 Identities = 66/106 (62%), Positives = 81/106 (76%), Gaps = 8/106 (7%)
 Frame = -1

Query: 706 VTGGAVDDLPNSMVRRLVKDKLG--------EISVLREALDAFSESSRIFIHYLSAAAND 551
           +T   VD+LP ++VRRLVKDKL         E+ V ++A+ AF+ES+RIFIHYLSA AND
Sbjct: 34  LTEAEVDELPRAIVRRLVKDKLSHVAGGEGAEVIVNKDAMAAFAESARIFIHYLSATAND 93

Query: 550 ICKESNRQTLTAEDVFKALDDIEFSEFVAPLRASLQDFRQKNAVKR 413
           +CKES RQT+ A+DV  ALDD+EFSEFV PLR SLQ+FR KNA KR
Sbjct: 94  MCKESKRQTINADDVLNALDDMEFSEFVEPLRTSLQEFRNKNADKR 139


>gb|AFK43246.1| unknown [Lotus japonicus]
          Length = 191

 Score =  127 bits (319), Expect = 2e-27
 Identities = 63/98 (64%), Positives = 82/98 (83%), Gaps = 6/98 (6%)
 Frame = -1

Query: 688 DDLPNSMVRRLVKDKL------GEISVLREALDAFSESSRIFIHYLSAAANDICKESNRQ 527
           DDLP ++VRR+VKDKL      G+IS+ ++AL AFSES++IFIHY+SA ANDICKES RQ
Sbjct: 5   DDLPKTIVRRVVKDKLSRCSEDGDISIHKDALLAFSESAKIFIHYISATANDICKESRRQ 64

Query: 526 TLTAEDVFKALDDIEFSEFVAPLRASLQDFRQKNAVKR 413
            + AEDVFKAL++ EF+EF+ PLRASL++FR+KNA K+
Sbjct: 65  IINAEDVFKALEETEFAEFIRPLRASLEEFRKKNAGKK 102


>ref|NP_001237961.1| uncharacterized protein LOC100306382 [Glycine max]
           gi|255628363|gb|ACU14526.1| unknown [Glycine max]
          Length = 161

 Score =  127 bits (318), Expect = 3e-27
 Identities = 72/142 (50%), Positives = 94/142 (66%), Gaps = 12/142 (8%)
 Frame = -1

Query: 688 DDLPNSMVRRLVKDKL------GEISVLREALDAFSESSRIFIHYLSAAANDICKESNRQ 527
           ++LP S+VRR+VKDKL      GEISV ++AL AFSES RIFIHYLSA ANDICKES RQ
Sbjct: 5   EELPRSIVRRVVKDKLSRCSEDGEISVSKDALLAFSESGRIFIHYLSATANDICKESKRQ 64

Query: 526 TLTAEDVFKALDDIEFSEFVAPLRASLQDFRQKN-----AVKRXXXXXXXXXXXXXKEIP 362
            +  EDVFKAL++ EF EF+ PL+ASL++FR+KN     AV +              E P
Sbjct: 65  IINVEDVFKALEETEFPEFLRPLKASLEEFRKKNAGKKAAVSKGKDDEPRKKRKLEGESP 124

Query: 361 TK-DGTEEEQNSDEGNEKSTNE 299
            K +G+++ + SD+G +    E
Sbjct: 125 DKGEGSDKAELSDKGEDPDKGE 146


>ref|XP_002275482.1| PREDICTED: nuclear transcription factor Y subunit B-8 [Vitis
           vinifera] gi|296084907|emb|CBI28316.3| unnamed protein
           product [Vitis vinifera]
          Length = 193

 Score =  125 bits (313), Expect = 1e-26
 Identities = 68/141 (48%), Positives = 94/141 (66%), Gaps = 8/141 (5%)
 Frame = -1

Query: 712 EKVTGGAVDDLPNSMVRRLVKDKL------GEISVLREALDAFSESSRIFIHYLSAAAND 551
           EKV    V++LP ++VRR+VKDKL      G+I + ++ L AF ES+RIFIHYLSA AND
Sbjct: 2   EKVAVAEVEELPKTIVRRVVKDKLSQFSDDGDIIIHKDGLRAFCESARIFIHYLSATAND 61

Query: 550 ICKESNRQTLTAEDVFKALDDIEFSEFVAPLRASLQDFRQKNAVKRXXXXXXXXXXXXXK 371
           +CKES RQT+ A+DV KA+++IEF EFV PL+ASL +FR+KNA K+             +
Sbjct: 62  LCKESRRQTINADDVLKAIEEIEFPEFVQPLKASLDEFRKKNAGKKAGAAKSKEAKKRKE 121

Query: 370 EIPTKDGTEEEQN--SDEGNE 314
           +    +  ++ +N   DEGNE
Sbjct: 122 DSSLNNEGDKGKNDGGDEGNE 142


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