BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica23_contig00015297
         (1484 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002276057.1| PREDICTED: probable RNA polymerase II transc...   567   e-159
ref|XP_003556327.1| PREDICTED: probable RNA polymerase II transc...   487   e-135
ref|XP_003535467.1| PREDICTED: probable RNA polymerase II transc...   479   e-133
ref|XP_003591640.1| General transcription factor IIH subunit [Me...   476   e-132
ref|XP_002894525.1| hypothetical protein ARALYDRAFT_892577 [Arab...   475   e-131

>ref|XP_002276057.1| PREDICTED: probable RNA polymerase II transcription factor B subunit
            1-1 [Vitis vinifera] gi|296090002|emb|CBI39821.3| unnamed
            protein product [Vitis vinifera]
          Length = 602

 Score =  567 bits (1461), Expect = e-159
 Identities = 290/443 (65%), Positives = 344/443 (77%), Gaps = 2/443 (0%)
 Frame = -2

Query: 1339 QVIKRAKYKSSIKDPGTPGVLTMKRERFVFMPSDPRSLMKLNVEFRFIIGHKFSKEAPNK 1160
            +V+KRA+YK+S+KD G  GVL M  ++FVFMP+DP S  + +VEFRFI GHKFSK   NK
Sbjct: 4    EVLKRARYKTSVKDSGVAGVLKMTEDKFVFMPNDPTSSARFDVEFRFIKGHKFSKGGSNK 63

Query: 1159 KALLNLTQD--KGESYIFEFDSFPDRDACRDFVAMAIAPPVNAGKAASDKSTVPPSSEQL 986
             ALLNLTQD  KG  YIFEF+++PDR+ CR+FV  A+A    A KA S++S V    EQL
Sbjct: 64   PALLNLTQDSEKGGGYIFEFENYPDREVCREFVGRALAKFSEASKAGSEQSAVKLFDEQL 123

Query: 985  STAEMDRRIKLLQVDSELQKLHKEFVMGGVLTEAEFWATRKKLLDEKISSKSKQRVGLKS 806
            ST EM+RRIKLL+ DSELQKLHK+FV+ GVLTEAEFWATRKKLLD   S  SKQRVG KS
Sbjct: 124  STIEMERRIKLLREDSELQKLHKQFVLSGVLTEAEFWATRKKLLDGNTSRTSKQRVGFKS 183

Query: 805  DMIFNVKPSSDGQSNRVKYNLTPEIIHQIFAEKPAVRRAYLNLVPKKMTETDFWMKYWRA 626
             MI ++KP +DG++NRV +NLTPEIIHQIFAEKPAV +A+LN VP KMTE DFW KY RA
Sbjct: 184  AMISDLKPLTDGRTNRVTFNLTPEIIHQIFAEKPAVHQAFLNFVPNKMTEKDFWNKYCRA 243

Query: 625  EYLHSTKNIVXXXXXXXXXXXXAVFLKQDDILASEARRKIRRVDPTLDMEADEGDDYTHL 446
            EYLH T+N V            AVFLK DDILA+EARRKIRRVDPTLDMEAD+GDDY HL
Sbjct: 244  EYLHCTRNTVAAAAEAAEDEELAVFLKHDDILANEARRKIRRVDPTLDMEADQGDDYMHL 303

Query: 445  PDHGLSRDVSKDLTDSQYDLYKRSFLQDLNRHAAVVLEGRSVDVELGDTRSVAEALTRLK 266
            PDHG+ RD SK++ D QY+ Y+R+  QDLNRHAAVVLEGR +DVEL DTR+VAEAL + K
Sbjct: 304  PDHGIFRDGSKEIIDPQYEQYRRTLSQDLNRHAAVVLEGRPIDVELEDTRTVAEALAKSK 363

Query: 265  QVESANEASNTHMEQGRSDLISRMAELEDLQGPRDHPVAPLSIKDPRDYFDSQQANAIKT 86
            +VE+ANE S+  + + R + ISRM E+EDLQ PRD P A L IKDPRDYFDSQQANA+KT
Sbjct: 364  RVEAANEKSDGSVTRERLERISRMTEIEDLQAPRDLPFAALCIKDPRDYFDSQQANALKT 423

Query: 85   SGESQSGSRHKKCILSAHEAYGS 17
             G++ +GS+  KC LS  EAYGS
Sbjct: 424  LGDTLAGSKQIKCSLSTQEAYGS 446


>ref|XP_003556327.1| PREDICTED: probable RNA polymerase II transcription factor B subunit
            1-1-like [Glycine max]
          Length = 587

 Score =  487 bits (1253), Expect = e-135
 Identities = 251/445 (56%), Positives = 321/445 (72%)
 Frame = -2

Query: 1351 MAERQVIKRAKYKSSIKDPGTPGVLTMKRERFVFMPSDPRSLMKLNVEFRFIIGHKFSKE 1172
            M+ RQV+KRAKYK+++KDPGTPGVL + +++FVF P+DP S  KL+VEFRFI GHK +KE
Sbjct: 1    MSSRQVVKRAKYKTTVKDPGTPGVLKLTQDKFVFKPNDPTSKTKLDVEFRFIQGHKVTKE 60

Query: 1171 APNKKALLNLTQDKGESYIFEFDSFPDRDACRDFVAMAIAPPVNAGKAASDKSTVPPSSE 992
               K A LNL   +G SYIFE ++F D   CR+ V +A+       K    ++T   S E
Sbjct: 61   GSKKPAWLNLIHSQG-SYIFELETFADLHVCRELVGVAL------NKQVPGEATKVISEE 113

Query: 991  QLSTAEMDRRIKLLQVDSELQKLHKEFVMGGVLTEAEFWATRKKLLDEKISSKSKQRVGL 812
            QLS AEM  +IKLLQ DS+LQ+LHKE V  G LTE+EFWAT+KK+LD+  S K KQ++G 
Sbjct: 114  QLSPAEMALKIKLLQEDSKLQRLHKELVASGKLTESEFWATKKKMLDQDESRKLKQQIGF 173

Query: 811  KSDMIFNVKPSSDGQSNRVKYNLTPEIIHQIFAEKPAVRRAYLNLVPKKMTETDFWMKYW 632
            K+ +IF+ KP SDG+ N+VK+ LTPEI +QIFA KPAV +A+LN VP+KM E DFW KY+
Sbjct: 174  KNSLIFDTKPMSDGRINQVKFQLTPEIKYQIFALKPAVHQAFLNFVPRKMNEVDFWNKYF 233

Query: 631  RAEYLHSTKNIVXXXXXXXXXXXXAVFLKQDDILASEARRKIRRVDPTLDMEADEGDDYT 452
            +AEYLHSTKN V            AVFLK D+IL  EAR+K+RRVDPTLDMEAD+GDDYT
Sbjct: 234  KAEYLHSTKNAVAAAAEAAEDEDLAVFLKDDEILEIEARKKVRRVDPTLDMEADQGDDYT 293

Query: 451  HLPDHGLSRDVSKDLTDSQYDLYKRSFLQDLNRHAAVVLEGRSVDVELGDTRSVAEALTR 272
            HLPDHG+ RD SKD++++Q  LYKR+ LQDLNR  AVVLEG+++D+E+   R+VAE L R
Sbjct: 294  HLPDHGIFRDGSKDISEAQNSLYKRTLLQDLNRQGAVVLEGKTLDMEMEHPRTVAEILAR 353

Query: 271  LKQVESANEASNTHMEQGRSDLISRMAELEDLQGPRDHPVAPLSIKDPRDYFDSQQANAI 92
             KQ        +  +++ R + IS+M  ++DLQ   +HP APL IKDPRDYFD QQANA+
Sbjct: 354  RKQ------ECDGVVDEERQNRISKMTLIDDLQAQDNHPYAPLCIKDPRDYFDFQQANAV 407

Query: 91   KTSGESQSGSRHKKCILSAHEAYGS 17
            KT  +SQ+G    KC L + EAYGS
Sbjct: 408  KTLDDSQTGMEQMKCSLGSEEAYGS 432


>ref|XP_003535467.1| PREDICTED: probable RNA polymerase II transcription factor B subunit
            1-1-like [Glycine max]
          Length = 604

 Score =  479 bits (1233), Expect = e-133
 Identities = 256/462 (55%), Positives = 319/462 (69%), Gaps = 17/462 (3%)
 Frame = -2

Query: 1351 MAERQVIKRAKYKSSIKDPGTPGVLTMKRERFVFMPSDPRSLMKLNVEFRFIIGHKFSKE 1172
            M+ RQV+KRAKYK+++KDPGTPGVL + ++RFVF P+DP S  KL+VEFRFI GHK +KE
Sbjct: 1    MSSRQVVKRAKYKTTVKDPGTPGVLKLTQDRFVFKPNDPTSKTKLDVEFRFIQGHKVTKE 60

Query: 1171 APNKKALLNLTQDKGESYIFEFDSFPDRDACRDFVAMA-----------IAPPVNAGKAA 1025
               +  LLNL + +G S IFE +SF D   CR+ + M            +    N  K+ 
Sbjct: 61   GSKQPPLLNLIRAQG-SCIFELESFADLHVCRELLIMRRYYAVYLFDHRLKSQSNGVKSF 119

Query: 1024 SDKSTVPP------SSEQLSTAEMDRRIKLLQVDSELQKLHKEFVMGGVLTEAEFWATRK 863
            +    VP       S EQLS AEM  RIKLLQ DS+LQ+LHKE V  G LTE+EFWAT+K
Sbjct: 120  ALNRNVPGEATKVISEEQLSPAEMALRIKLLQEDSKLQRLHKELVASGKLTESEFWATKK 179

Query: 862  KLLDEKISSKSKQRVGLKSDMIFNVKPSSDGQSNRVKYNLTPEIIHQIFAEKPAVRRAYL 683
            KLLD+  S K KQR+G K+ +IF+ KP SDG+ N+VK+ LTPEI +QIFA KPAV +A+L
Sbjct: 180  KLLDQDESRKLKQRIGFKNSLIFDTKPMSDGRINQVKFQLTPEIKYQIFALKPAVHQAFL 239

Query: 682  NLVPKKMTETDFWMKYWRAEYLHSTKNIVXXXXXXXXXXXXAVFLKQDDILASEARRKIR 503
            N VP KM E DFW KY++AEYLHSTKN V            AVFLK D+IL  EAR+K+R
Sbjct: 240  NFVPSKMNEVDFWNKYFKAEYLHSTKNAVAAAAEAAEDEDLAVFLKDDEILEIEARKKVR 299

Query: 502  RVDPTLDMEADEGDDYTHLPDHGLSRDVSKDLTDSQYDLYKRSFLQDLNRHAAVVLEGRS 323
            RVDPTLDMEAD+GDDYTHLPDHG+ RD SKD++++Q  LYKR+ LQDLNR  AVVLEG++
Sbjct: 300  RVDPTLDMEADQGDDYTHLPDHGIFRDGSKDISEAQNSLYKRTLLQDLNRQGAVVLEGKT 359

Query: 322  VDVELGDTRSVAEALTRLKQVESANEASNTHMEQGRSDLISRMAELEDLQGPRDHPVAPL 143
            +D+E+   R+VAE L R KQ            ++ R + IS+M  +EDLQ   +HP APL
Sbjct: 360  LDMEMEHPRTVAEILARRKQ------------DEERRNRISKMTPIEDLQAQDNHPYAPL 407

Query: 142  SIKDPRDYFDSQQANAIKTSGESQSGSRHKKCILSAHEAYGS 17
             IKDPRDYFDSQQANA+KT  +SQ+G    KC L + EAY S
Sbjct: 408  CIKDPRDYFDSQQANAVKTLDDSQAGMEQMKCSLGSEEAYDS 449


>ref|XP_003591640.1| General transcription factor IIH subunit [Medicago truncatula]
            gi|355480688|gb|AES61891.1| General transcription factor
            IIH subunit [Medicago truncatula]
          Length = 586

 Score =  476 bits (1224), Expect = e-132
 Identities = 246/442 (55%), Positives = 315/442 (71%)
 Frame = -2

Query: 1342 RQVIKRAKYKSSIKDPGTPGVLTMKRERFVFMPSDPRSLMKLNVEFRFIIGHKFSKEAPN 1163
            +QV+KRAKYKS++KDPGTPGV+ + R++ VF P+DP S  KL+V+FR I   K +KE   
Sbjct: 6    QQVVKRAKYKSTVKDPGTPGVIKLTRQKVVFKPNDPTSNNKLDVDFRLIKSQKNTKEGST 65

Query: 1162 KKALLNLTQDKGESYIFEFDSFPDRDACRDFVAMAIAPPVNAGKAASDKSTVPPSSEQLS 983
            K   LNL   +G SYIFEF+SF D   CR+F A  I+ PV A K  SD        EQLS
Sbjct: 66   KPPWLNLVHSQG-SYIFEFESFSDLHVCREFAAGIISKPVEAPKVVSD--------EQLS 116

Query: 982  TAEMDRRIKLLQVDSELQKLHKEFVMGGVLTEAEFWATRKKLLDEKISSKSKQRVGLKSD 803
            TAEM  R+KLL  DS+L+K+H E VM   LTE+EFWAT+KKLLD+  S K KQR+G K+ 
Sbjct: 117  TAEMTLRMKLLGEDSKLKKIHMELVMSDKLTESEFWATKKKLLDQDESRKLKQRIGFKNS 176

Query: 802  MIFNVKPSSDGQSNRVKYNLTPEIIHQIFAEKPAVRRAYLNLVPKKMTETDFWMKYWRAE 623
            +IF+ KP+SDG+ N+VK+ LTPEI +QIFA KPAV +A+LN VP KM+E DFW KY++AE
Sbjct: 177  LIFDTKPTSDGRINQVKFQLTPEIKYQIFALKPAVHQAFLNFVPSKMSEVDFWNKYFKAE 236

Query: 622  YLHSTKNIVXXXXXXXXXXXXAVFLKQDDILASEARRKIRRVDPTLDMEADEGDDYTHLP 443
            YLHSTKN +            AVFLK D+IL +EAR+K+RRVDPTLDMEAD+GDDYTHLP
Sbjct: 237  YLHSTKNAIAAAAEAAEDEDLAVFLKDDEILENEARKKVRRVDPTLDMEADQGDDYTHLP 296

Query: 442  DHGLSRDVSKDLTDSQYDLYKRSFLQDLNRHAAVVLEGRSVDVELGDTRSVAEALTRLKQ 263
            DHG+ RD SK+ +++Q  LY+R+ LQDLNR + VVLEG+++D+++   R+  EAL R K 
Sbjct: 297  DHGIFRDGSKETSEAQNTLYRRTLLQDLNRQSEVVLEGKTLDIDMEHPRTAVEALARRKH 356

Query: 262  VESANEASNTHMEQGRSDLISRMAELEDLQGPRDHPVAPLSIKDPRDYFDSQQANAIKTS 83
                    +  + + R + IS+MA++EDLQ   DHP APL IKDPRDYFDSQQANA+KT 
Sbjct: 357  -------ESDGVVEERRNRISKMAQIEDLQAQDDHPFAPLCIKDPRDYFDSQQANAVKTL 409

Query: 82   GESQSGSRHKKCILSAHEAYGS 17
             +S SG    +C L + EAYGS
Sbjct: 410  DDSLSGKEKIRCNLGSEEAYGS 431


>ref|XP_002894525.1| hypothetical protein ARALYDRAFT_892577 [Arabidopsis lyrata subsp.
            lyrata] gi|297340367|gb|EFH70784.1| hypothetical protein
            ARALYDRAFT_892577 [Arabidopsis lyrata subsp. lyrata]
          Length = 592

 Score =  475 bits (1223), Expect = e-131
 Identities = 253/444 (56%), Positives = 315/444 (70%)
 Frame = -2

Query: 1351 MAERQVIKRAKYKSSIKDPGTPGVLTMKRERFVFMPSDPRSLMKLNVEFRFIIGHKFSKE 1172
            MA  QV KR KYKSS+KDPGTPG L ++    +F+P+DP+S  KL V  + I   K +KE
Sbjct: 1    MAGGQVEKRVKYKSSVKDPGTPGFLRIREGMLLFVPNDPKSDSKLKVLTQNIKSQKNTKE 60

Query: 1171 APNKKALLNLTQDKGESYIFEFDSFPDRDACRDFVAMAIAPPVNAGKAASDKSTVPPSSE 992
              NK   LNLT   G+S+IFEF+++PD  ACRDF+  A+A      +   +KS V  SSE
Sbjct: 61   ESNKPPWLNLTNKLGKSHIFEFENYPDMHACRDFITKALAKC----EEEPNKSVVSTSSE 116

Query: 991  QLSTAEMDRRIKLLQVDSELQKLHKEFVMGGVLTEAEFWATRKKLLDEKISSKSKQRVGL 812
            QLS  E++ R KLL+ +SELQ+LHK+FV   VLTE EFWATRKKLL +    KSKQ+VGL
Sbjct: 117  QLSIKELELRFKLLRENSELQRLHKQFVESKVLTEDEFWATRKKLLGKDSIRKSKQQVGL 176

Query: 811  KSDMIFNVKPSSDGQSNRVKYNLTPEIIHQIFAEKPAVRRAYLNLVPKKMTETDFWMKYW 632
            KS M+  +KPS+DG++NRV +NLTPEII QIFAEKPAVR+A++N VP KMTE DFW KY+
Sbjct: 177  KSMMVSGIKPSTDGRTNRVTFNLTPEIIFQIFAEKPAVRQAFINYVPSKMTEKDFWTKYF 236

Query: 631  RAEYLHSTKNIVXXXXXXXXXXXXAVFLKQDDILASEARRKIRRVDPTLDMEADEGDDYT 452
            RAEYL+STKN              AVFLK D+ILA E R+KIRRVDPTLDMEAD+GDDYT
Sbjct: 237  RAEYLYSTKNTAVAAAEAAEDEELAVFLKPDEILARETRQKIRRVDPTLDMEADQGDDYT 296

Query: 451  HLPDHGLSRDVSKDLTDSQYDLYKRSFLQDLNRHAAVVLEGRSVDVELGDTRSVAEALTR 272
            HL DHG+ RD + D+ + Q D ++RS LQDLNRHAAVVLEGRS+DVE  DTR VAEALTR
Sbjct: 297  HLMDHGIQRDGTMDVVEPQNDQFRRSLLQDLNRHAAVVLEGRSIDVESEDTRIVAEALTR 356

Query: 271  LKQVESANEASNTHMEQGRSDLISRMAELEDLQGPRDHPVAPLSIKDPRDYFDSQQANAI 92
            +KQV  A+  +       R + +SR+A +EDLQ P++ P+APLSIKDPRDYF+SQQ N +
Sbjct: 357  VKQVSKADGETTKDANLERLERMSRLAGMEDLQAPQNFPLAPLSIKDPRDYFESQQGNVL 416

Query: 91   KTSGESQSGSRHKKCILSAHEAYG 20
                 ++   R      + HEAYG
Sbjct: 417  NVPRGAKGLKR------NVHEAYG 434