BLASTX nr result

ID: Angelica23_contig00015038 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica23_contig00015038
         (1353 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002266870.1| PREDICTED: E3 ubiquitin-protein ligase RING1...   263   6e-68
ref|XP_003545449.1| PREDICTED: E3 ubiquitin-protein ligase RING1...   254   3e-65
ref|XP_002308856.1| predicted protein [Populus trichocarpa] gi|2...   251   2e-64
ref|XP_002323210.1| predicted protein [Populus trichocarpa] gi|2...   249   2e-63
ref|XP_003617180.1| Thioredoxin-related protein [Medicago trunca...   242   1e-61

>ref|XP_002266870.1| PREDICTED: E3 ubiquitin-protein ligase RING1-like isoform 1 [Vitis
            vinifera]
          Length = 336

 Score =  263 bits (673), Expect = 6e-68
 Identities = 153/345 (44%), Positives = 193/345 (55%), Gaps = 38/345 (11%)
 Frame = -3

Query: 1225 MSSGGNTHWCYQCGQAVRPRRRNLVCPYCDGGFVQELSEVVGNRQEDYGVDRNDSFNFGS 1046
            MS+GGNTHWCYQC + VR + R+ VC YC GGF+QEL+++ G   E +   +N   N G 
Sbjct: 1    MSTGGNTHWCYQCRRRVRLQGRDTVCSYCYGGFIQELNDLEGLVPEAFLGSQNSEDNHGQ 60

Query: 1045 TELVRDPF-------------GVNDELANFIRQMLVGGNSGFGGRTRSNLFPE------- 926
               + D F             G+ + + +F+RQ + G N  F  R RS L PE       
Sbjct: 61   MSSIFDAFNGLVRQGNADQRFGLVNAVNDFMRQRMAGRNPNFDVRVRSGLVPEDNSMSGY 120

Query: 925  -----FVLHGRGPQRMSSDDTFEFLFNGTPLMRGHQHANLNEFLMGPGLQEFIEQLTGND 761
                  V HG+ P         E LF+G     G    N+ +  +GPGL+E IEQLT ND
Sbjct: 121  RSGPWLVFHGQIP--------VEALFSGGTGRGG----NVGDLFLGPGLEELIEQLTMND 168

Query: 760  XXXXXXXXXXAIDAMPTVKISQRHLRSDSQCPVCQEKFELGSEAREMPCNHLYHSDCIVP 581
                      +IDAMPT+KI+QRHLRSDS CPVC++KFELGSEAR+MPC+H+YHSDCIVP
Sbjct: 169  RRGPPPATRSSIDAMPTIKITQRHLRSDSHCPVCKDKFELGSEARQMPCDHIYHSDCIVP 228

Query: 580  WLVEHNSCPVCRVEL-PRVSGTAR-------SNRRAXXXXXXXXXXXXXXXXXXXXXXQG 425
            WLV+HNSCPVCR EL P+VSG  R        NR +                      QG
Sbjct: 229  WLVQHNSCPVCRQELPPQVSGNVRGQQSSNGGNRSSRSENRSSSNGSSASGSENGGQSQG 288

Query: 424  -RSLLSSFWPFRSSNQGS----EAGGSSSRAPYDENNGSNYAAWP 305
             R+L SS WPF SSN  +    E GGSSSR P+ EN+  +Y+ WP
Sbjct: 289  RRNLFSSLWPFGSSNPNAHHYDETGGSSSRTPHGENHEMDYSGWP 333


>ref|XP_003545449.1| PREDICTED: E3 ubiquitin-protein ligase RING1-like isoform 1 [Glycine
            max] gi|356554227|ref|XP_003545450.1| PREDICTED: E3
            ubiquitin-protein ligase RING1-like isoform 2 [Glycine
            max] gi|356554229|ref|XP_003545451.1| PREDICTED: E3
            ubiquitin-protein ligase RING1-like isoform 3 [Glycine
            max] gi|356554231|ref|XP_003545452.1| PREDICTED: E3
            ubiquitin-protein ligase RING1-like isoform 4 [Glycine
            max]
          Length = 336

 Score =  254 bits (650), Expect = 3e-65
 Identities = 145/334 (43%), Positives = 177/334 (52%), Gaps = 28/334 (8%)
 Frame = -3

Query: 1219 SGGNTHWCYQCGQAVRPRRRNLVCPYCDGGFVQELSEVVGNRQEDYGVDRNDSFNFGSTE 1040
            S G THWCY C Q +    R+ VCPYCDGGFVQEL E+ G          + S +F    
Sbjct: 2    SSGATHWCYACRQPIVLDGRDPVCPYCDGGFVQELDELRGIAPNHNHTFSSQSGDFHQMP 61

Query: 1039 LVRDP-------------FGVNDELANFIRQMLVGGNSGFGGRTRSNLFP----EFVLHG 911
             + D              FG+ D + NF+R  + G NS F  R RS   P     + ++ 
Sbjct: 62   DIFDAIHAFMGQRGSDQRFGLMDAVDNFMRHRMAGRNSNFDVRGRSGSLPVPEQSWGVYS 121

Query: 910  RGPQRMSSDDTFEFLFNGTPLMRGHQHANLNEFLMGPGLQEFIEQLTGNDXXXXXXXXXX 731
             GP  +       F  +      G +  +  ++ MGPGL+E IEQLT ND          
Sbjct: 122  SGPYLIFHGQVPGFTLSAGSPRGGPRRVDFGDYFMGPGLEELIEQLTMNDQRGPAPAARS 181

Query: 730  AIDAMPTVKISQRHLRSDSQCPVCQEKFELGSEAREMPCNHLYHSDCIVPWLVEHNSCPV 551
            +IDAMPT+KI+Q HLRSDS CPVC+EKFELG+EAREMPCNH+YHSDCIVPWLV+HNSCPV
Sbjct: 182  SIDAMPTIKITQAHLRSDSHCPVCKEKFELGTEAREMPCNHIYHSDCIVPWLVQHNSCPV 241

Query: 550  CRVELPRVSGTARS-------NRRAXXXXXXXXXXXXXXXXXXXXXXQGRSLLSSFWPFR 392
            CRVELP   G A S        R A                        R+  S  WPFR
Sbjct: 242  CRVELP-PQGQASSRGTRSWGGRNASNSSSSGSNDSSRGRENSHQNHGRRNPFSFLWPFR 300

Query: 391  SSNQG----SEAGGSSSRAPYDENNGSNYAAWPF 302
            SSN      SE GGSSS    D+NNG++Y+ WPF
Sbjct: 301  SSNSNNNHYSETGGSSSSTTPDQNNGTSYSGWPF 334


>ref|XP_002308856.1| predicted protein [Populus trichocarpa] gi|222854832|gb|EEE92379.1|
            predicted protein [Populus trichocarpa]
          Length = 311

 Score =  251 bits (642), Expect = 2e-64
 Identities = 138/322 (42%), Positives = 183/322 (56%), Gaps = 12/322 (3%)
 Frame = -3

Query: 1228 RMSSGGNTHWCYQCGQAVRPRRRNLVCPYCDGGFVQELSEVVG-NRQEDYGVDRNDSFNF 1052
            RMSS  NTHWCY C + VR R R+  CPYC GGFVQEL ++   N  + +G+D +D  + 
Sbjct: 3    RMSSSRNTHWCYSCRRPVRLRGRDAACPYCSGGFVQELDDMHRINPLDFFGMDGDDDHD- 61

Query: 1051 GSTELVRDPFGVNDELANFIRQMLVGGNSGFGGRTRSNLFPE--------FVLHGRGPQR 896
                   + FG+ +  + F+RQ +   +     R+RS+  PE         +  G+ P R
Sbjct: 62   -------NMFGLMEAFSAFMRQRMADRSHNHDIRSRSDSIPEHNPGFGPLLIFGGQIPFR 114

Query: 895  MSSDDTFEFLFNGTPLMRGHQHANLNEFLMGPGLQEFIEQLTGNDXXXXXXXXXXAIDAM 716
            +S +   E LF+G+P +      N  ++ +GPGL+E  EQL+ ND          +IDAM
Sbjct: 115  LSGNGGLEALFSGSPGV-AFARGNAGDYFVGPGLEELFEQLSANDRRGPPPATRSSIDAM 173

Query: 715  PTVKISQRHLRSDSQCPVCQEKFELGSEAREMPCNHLYHSDCIVPWLVEHNSCPVCRVEL 536
            PT+KI+Q+HLRSDS CPVC++KFELGSEAR+MPC+HLYHSDCIVPWLV+HNSCPVCR EL
Sbjct: 174  PTIKITQKHLRSDSHCPVCKDKFELGSEARQMPCDHLYHSDCIVPWLVQHNSCPVCRQEL 233

Query: 535  PRVSGTARSNRRAXXXXXXXXXXXXXXXXXXXXXXQGRSLLSSFWPFRSSNQGS---EAG 365
            P       SN                           R+ LS  WPFRSSN  S   E  
Sbjct: 234  PPQG----SNSGHSYQSSSSRSRSSNYSGRENSREGRRNPLSYLWPFRSSNSSSNHDETP 289

Query: 364  GSSSRAPYDENNGSNYAAWPFH 299
            GSSS   ++ N+   Y+ WPF+
Sbjct: 290  GSSSPTMHENNHQMGYSGWPFN 311


>ref|XP_002323210.1| predicted protein [Populus trichocarpa] gi|222867840|gb|EEF04971.1|
            predicted protein [Populus trichocarpa]
          Length = 308

 Score =  249 bits (635), Expect = 2e-63
 Identities = 135/320 (42%), Positives = 181/320 (56%), Gaps = 11/320 (3%)
 Frame = -3

Query: 1225 MSSGGNTHWCYQCGQAVRPRRRNLVCPYCDGGFVQELSEVVGNRQEDYGVDRNDSFNFGS 1046
            MSS  NTHWCY C + VR R R+  CPYC GGFVQEL ++       + +   D F   S
Sbjct: 1    MSSSRNTHWCYSCRRPVRLRGRDSACPYCSGGFVQELDDM-------HRISPLDFFGMDS 53

Query: 1045 TELVRDPFGVNDELANFIRQMLVGGNSGFGGRTRSNLFPE--------FVLHGRGPQRMS 890
             +     FG+ +  ++F+RQ +   +     R+RS+  P          +  G+ P R+S
Sbjct: 54   DDDRDQRFGLMEAFSDFMRQRMADRSHNHDIRSRSDSVPGHNPGFGPLLIFGGQVPFRLS 113

Query: 889  SDDTFEFLFNGTPLMRGHQHANLNEFLMGPGLQEFIEQLTGNDXXXXXXXXXXAIDAMPT 710
             +  FE LF+G P +      N  ++ +GPGL+E  EQL+ ND          +IDAMPT
Sbjct: 114  GNGGFEALFSGAPGV-AFARGNAGDYFIGPGLEELFEQLSANDQRGPPPATRSSIDAMPT 172

Query: 709  VKISQRHLRSDSQCPVCQEKFELGSEAREMPCNHLYHSDCIVPWLVEHNSCPVCRVELPR 530
            +KI+Q+HLRSDS CPVC++KFELGSEAR+MPC+HLYHSDCIVPWLV+HNSCPVCR ELP 
Sbjct: 173  IKITQKHLRSDSHCPVCKDKFELGSEARQMPCDHLYHSDCIVPWLVQHNSCPVCRQELPP 232

Query: 529  VSGTARSNRRAXXXXXXXXXXXXXXXXXXXXXXQGRSLLSSFWPFRSSNQGS---EAGGS 359
               ++R + ++                        R+ LS  WPFRSSN  S   E   S
Sbjct: 233  QGSSSRHSYQSSSSRSRSSNYSGRENSRGGR----RNPLSYLWPFRSSNSSSNHDETPES 288

Query: 358  SSRAPYDENNGSNYAAWPFH 299
            SS A ++ N    Y+ WPF+
Sbjct: 289  SSPAMHENNPHMGYSGWPFN 308


>ref|XP_003617180.1| Thioredoxin-related protein [Medicago truncatula]
            gi|355518515|gb|AET00139.1| Thioredoxin-related protein
            [Medicago truncatula]
          Length = 371

 Score =  242 bits (618), Expect = 1e-61
 Identities = 143/344 (41%), Positives = 183/344 (53%), Gaps = 33/344 (9%)
 Frame = -3

Query: 1234 VLRMSSGGNTHWCYQCGQAVRPRRRNLVCPYCDGGFVQELSEVVGNRQEDYGVDRNDSFN 1055
            V  + S G THWCY+C + +    R++VCPYCD GFVQEL+E+ G   ++    R+  FN
Sbjct: 43   VEEIMSSGATHWCYECNRPIVLEGRDVVCPYCDEGFVQELNEMRGTAPQNTFPSRSGEFN 102

Query: 1054 -----------FGSTELVRDPFGVNDELANFIRQMLVGGNSGFGGRTRSNLFPE------ 926
                       F       + FG+ D + NF+R  + G +  F  R RS+  P       
Sbjct: 103  QMPDLFDAIHAFVGHRGSDNRFGLMDAVDNFMRHRMAGMHPNFDVRGRSSSVPVPEQGWG 162

Query: 925  -------FVLHGRGPQRMSSDDTFEFLFNGTPLMRGHQHANLNEFLMGPGLQEFIEQLTG 767
                    V HG+ P           L NG+P   G +  +  ++ MG GL+E IEQLT 
Sbjct: 163  VYSSGPFLVFHGQVPGLT--------LPNGSP-RGGPRRGDFGDYFMGSGLEELIEQLTM 213

Query: 766  NDXXXXXXXXXXAIDAMPTVKISQRHLRSDSQCPVCQEKFELGSEAREMPCNHLYHSDCI 587
            ND          +IDAMPT++I+Q HLRSDS CPVC+EKFELGSEAREMPC+H+YHS+CI
Sbjct: 214  NDRRGPPPAARSSIDAMPTIRITQAHLRSDSHCPVCKEKFELGSEAREMPCDHIYHSECI 273

Query: 586  VPWLVEHNSCPVCRVELP-----RVSGTARSNRRAXXXXXXXXXXXXXXXXXXXXXXQGR 422
            VPWLV+HNSCPVCRVELP        G++RSN                           R
Sbjct: 274  VPWLVQHNSCPVCRVELPPQGQMSSRGSSRSNSGGNGSSRGRESDRPNNGR--------R 325

Query: 421  SLLSSFWPFRSS----NQGSEAGGSSSRAPYDENNGSNYAAWPF 302
            +  S  WPFRSS    NQ SE GGSSS    D+NNG+ Y  W +
Sbjct: 326  NPFSFLWPFRSSSSNNNQYSETGGSSSSTNADQNNGTRYNGWHY 369


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