BLASTX nr result

ID: Angelica23_contig00014972 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica23_contig00014972
         (1135 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002279868.1| PREDICTED: uncharacterized protein LOC100263...   298   2e-78
ref|XP_002327534.1| predicted protein [Populus trichocarpa] gi|2...   285   2e-74
ref|XP_004155937.1| PREDICTED: LOW QUALITY PROTEIN: U2 small nuc...   271   3e-70
ref|XP_004141677.1| PREDICTED: U2 small nuclear ribonucleoprotei...   271   3e-70
gb|AFK36557.1| unknown [Medicago truncatula]                          263   6e-68

>ref|XP_002279868.1| PREDICTED: uncharacterized protein LOC100263499 [Vitis vinifera]
           gi|297743102|emb|CBI35969.3| unnamed protein product
           [Vitis vinifera]
          Length = 272

 Score =  298 bits (763), Expect = 2e-78
 Identities = 159/255 (62%), Positives = 181/255 (70%), Gaps = 5/255 (1%)
 Frame = +1

Query: 124 NNINTLFISGLPDDVSVREIHNLFRHRPGFESCQLKYTGRRNQVVAFATFNDHRSAIAVL 303
           + INTLF+SGLPDDV  REIHNLFR RPGF+SCQLKYTGR NQVVAFATF +H++A+A L
Sbjct: 18  SGINTLFVSGLPDDVKPREIHNLFRRRPGFDSCQLKYTGRGNQVVAFATFFNHQTAVAAL 77

Query: 304 HTLNGVKFDPETGHVLHIELAXXXXXXXXXXXX-PYVVIDKRKXXXXXXXXXXXXXXXXX 480
           H LNGVKFDP+TG +LHIELA              YVVIDKR                  
Sbjct: 78  HALNGVKFDPQTGSILHIELARSNSRRKRVPGSGAYVVIDKRSKTSTNAHETSSDDGDSE 137

Query: 481 XXLPNGPGNPESSDKDDIEIQKSGE--TEPNIGASE-NEQTEKNAD-GLQPCSTLFIANL 648
              P    NP+S + DD+   KSGE   +P+   +  NEQ EK  D GL PCSTLFIANL
Sbjct: 138 SDEPAKTSNPDSGNNDDLVTAKSGEMAVDPDSTLTAVNEQPEKTTDAGLPPCSTLFIANL 197

Query: 649 GPTCTSDELKQVLSQYPGFNSLKVRDRGGMPVAFADFEELEQANVVMNALKDTTLPSSDR 828
           GPTCT DELKQVLSQYPGFN LK+R +GGMPVAFADFEE+EQAN  M+AL+ + L SSDR
Sbjct: 198 GPTCTEDELKQVLSQYPGFNVLKMRAKGGMPVAFADFEEIEQANKAMDALQGSMLASSDR 257

Query: 829 GGMHIEYARSKMRKP 873
           GGMH+EYARSKMRKP
Sbjct: 258 GGMHLEYARSKMRKP 272


>ref|XP_002327534.1| predicted protein [Populus trichocarpa] gi|222836088|gb|EEE74509.1|
           predicted protein [Populus trichocarpa]
          Length = 281

 Score =  285 bits (728), Expect = 2e-74
 Identities = 154/255 (60%), Positives = 180/255 (70%), Gaps = 4/255 (1%)
 Frame = +1

Query: 121 NNNINTLFISGLPDDVSVREIHNLFRHRPGFESCQLKYTGRRNQVVAFATFNDHRSAIAV 300
           N+ INTLF+SGLPDDV  REIHN+FR RPGF+SCQLKYTGR NQVVAFATF +H+SAIA 
Sbjct: 27  NSGINTLFVSGLPDDVKAREIHNIFRRRPGFDSCQLKYTGRGNQVVAFATFFNHQSAIAA 86

Query: 301 LHTLNGVKFDPETGHVLHIELAXXXXXXXXXXXX-PYVVIDKRKXXXXXXXXXXXXXXXX 477
           LH+LNGVKFDP++G  LHIELA              YVVIDKR                 
Sbjct: 87  LHSLNGVKFDPQSGSTLHIELARSNSRRKRKPGSGAYVVIDKRTKKPSDAHETSSDDVES 146

Query: 478 XXXLPNGPGNPESSDKDDIEIQKS-GETEP-NIGASENEQTEKNADG-LQPCSTLFIANL 648
                    N +++ + D E  KS   ++P N   + NE  E+ A+G ++PCSTLFIANL
Sbjct: 147 DPEEDPEMNNVDTAYQGDSENAKSEAASDPDNAAVAVNEIGERTAEGGVRPCSTLFIANL 206

Query: 649 GPTCTSDELKQVLSQYPGFNSLKVRDRGGMPVAFADFEELEQANVVMNALKDTTLPSSDR 828
           GP CT DELKQVLSQYPGF+ LK+R +GGMPVAFADFEE+EQA  VM  L++TTLPSSDR
Sbjct: 207 GPNCTEDELKQVLSQYPGFHVLKIRAKGGMPVAFADFEEIEQATKVMENLQETTLPSSDR 266

Query: 829 GGMHIEYARSKMRKP 873
           GGMHIEYARSKMRKP
Sbjct: 267 GGMHIEYARSKMRKP 281


>ref|XP_004155937.1| PREDICTED: LOW QUALITY PROTEIN: U2 small nuclear ribonucleoprotein
           B''-like [Cucumis sativus]
          Length = 262

 Score =  271 bits (692), Expect = 3e-70
 Identities = 148/255 (58%), Positives = 172/255 (67%), Gaps = 1/255 (0%)
 Frame = +1

Query: 109 TDTGNNNINTLFISGLPDDVSVREIHNLFRHRPGFESCQLKYTGRRNQVVAFATFNDHRS 288
           T +  +NINTLFISGLPDDV  REIHNLFR RPGF+SCQLKYTGR NQVVAFATF +H+S
Sbjct: 18  TYSERSNINTLFISGLPDDVKAREIHNLFRRRPGFDSCQLKYTGRGNQVVAFATFYNHQS 77

Query: 289 AIAVLHTLNGVKFDPETGHVLHIELA-XXXXXXXXXXXXPYVVIDKRKXXXXXXXXXXXX 465
           A+  LH LNGVKFDP++G VLHIELA              YVVIDKRK            
Sbjct: 78  AVTALHALNGVKFDPQSGSVLHIELARSNSRRKHKPGGGAYVVIDKRKKPXANSQETSS- 136

Query: 466 XXXXXXXLPNGPGNPESSDKDDIEIQKSGETEPNIGASENEQTEKNADGLQPCSTLFIAN 645
                    +G   P+   K   +  ++  T  N  ++  E  EKN  G  PCSTLFIAN
Sbjct: 137 --------DDGGSEPDEPSKKAQQSNEAVVTPANAISAPYEHHEKNDGG--PCSTLFIAN 186

Query: 646 LGPTCTSDELKQVLSQYPGFNSLKVRDRGGMPVAFADFEELEQANVVMNALKDTTLPSSD 825
           LGP C  DELK+VL +YPGFN LK+R + GMPVAFADFE++EQA+ VM  L+ + LPSSD
Sbjct: 187 LGPNCNEDELKEVLCKYPGFNVLKLRAKSGMPVAFADFEDIEQASKVMEELQGSVLPSSD 246

Query: 826 RGGMHIEYARSKMRK 870
           RGGMHIEYARSKMRK
Sbjct: 247 RGGMHIEYARSKMRK 261


>ref|XP_004141677.1| PREDICTED: U2 small nuclear ribonucleoprotein B''-like [Cucumis
           sativus]
          Length = 262

 Score =  271 bits (692), Expect = 3e-70
 Identities = 147/255 (57%), Positives = 171/255 (67%), Gaps = 1/255 (0%)
 Frame = +1

Query: 109 TDTGNNNINTLFISGLPDDVSVREIHNLFRHRPGFESCQLKYTGRRNQVVAFATFNDHRS 288
           T +  +NINTLFISGLPDDV  REIHNLFR RPGF+SCQLKYTGR NQVVAFATF +H+S
Sbjct: 18  TYSERSNINTLFISGLPDDVKAREIHNLFRRRPGFDSCQLKYTGRGNQVVAFATFYNHQS 77

Query: 289 AIAVLHTLNGVKFDPETGHVLHIELA-XXXXXXXXXXXXPYVVIDKRKXXXXXXXXXXXX 465
           A+  LH LNGVKFDP++G VLHIELA              YVVIDKRK            
Sbjct: 78  AVTALHALNGVKFDPQSGSVLHIELARSNSRRKHKPGGGAYVVIDKRKKTDANSQETSS- 136

Query: 466 XXXXXXXLPNGPGNPESSDKDDIEIQKSGETEPNIGASENEQTEKNADGLQPCSTLFIAN 645
                    +G   P+   K   +  ++  T  N  ++  E  EKN  G  PCSTLFIAN
Sbjct: 137 --------DDGGSEPDEPSKKAQQSNEAVVTPANAISAPYEHHEKNDGG--PCSTLFIAN 186

Query: 646 LGPTCTSDELKQVLSQYPGFNSLKVRDRGGMPVAFADFEELEQANVVMNALKDTTLPSSD 825
           LGP C  DELK+VL +YPGFN LK+R + GMPVAFADFE++EQA+ VM  L+ + LPSSD
Sbjct: 187 LGPNCNEDELKEVLCKYPGFNVLKLRAKSGMPVAFADFEDIEQASKVMEELQGSVLPSSD 246

Query: 826 RGGMHIEYARSKMRK 870
           RGGMHIEYARSKMRK
Sbjct: 247 RGGMHIEYARSKMRK 261


>gb|AFK36557.1| unknown [Medicago truncatula]
          Length = 268

 Score =  263 bits (672), Expect = 6e-68
 Identities = 143/256 (55%), Positives = 173/256 (67%), Gaps = 5/256 (1%)
 Frame = +1

Query: 124 NNINTLFISGLPDDVSVREIHNLFRHRPGFESCQLKYTGRRNQVVAFATFNDHRSAIAVL 303
           +NINTLF+SGLPDDV  REIHNLFR RPGF+SCQLKYTGR NQVVAFATF +H++A+  L
Sbjct: 18  SNINTLFVSGLPDDVKAREIHNLFRRRPGFDSCQLKYTGRANQVVAFATFFNHQAAMQAL 77

Query: 304 HTLNGVKFDPETGHVLHIELA-XXXXXXXXXXXXPYVVIDKRKXXXXXXXXXXXXXXXXX 480
           H+LNGVKFDP++G VLHIELA              YVVIDKR                  
Sbjct: 78  HSLNGVKFDPQSGSVLHIELARSNSRRKRKPGGGAYVVIDKRSKGEANVQGSSSDDGESD 137

Query: 481 XXLPNGPGNPESSDKDDIEIQKSGE----TEPNIGASENEQTEKNADGLQPCSTLFIANL 648
              P+  G    S+  DI   +SG+    ++ ++  +  +  +   DG  PCSTLFIANL
Sbjct: 138 PDEPSENG----SNHGDIATAQSGDAVVGSDNHVPVARAQHGKGGGDG-GPCSTLFIANL 192

Query: 649 GPTCTSDELKQVLSQYPGFNSLKVRDRGGMPVAFADFEELEQANVVMNALKDTTLPSSDR 828
           GP CT DELKQ LS Y GFN +K+R RGGMPVAFADFEE++QA  VM  L+ ++LPSSDR
Sbjct: 193 GPNCTEDELKQALSVYAGFNLVKMRSRGGMPVAFADFEEIDQAVKVMEELQGSSLPSSDR 252

Query: 829 GGMHIEYARSKMRKPK 876
           GGMHIEYARS+MRK +
Sbjct: 253 GGMHIEYARSRMRKKR 268


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