BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica23_contig00014917
         (855 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ADB85430.1| putative retrotransposon protein [Phyllostachys e...   364   e-119
dbj|BAA22288.1| polyprotein [Oryza australiensis]                     352   e-115
gb|ADB85429.1| putative retrotransposon protein [Phyllostachys e...   353   e-115
gb|ABF97047.1| retrotransposon protein, putative, Ty1-copia subc...   341   e-113
gb|AAP44605.1| putative polyprotein [Oryza sativa Japonica Group]     341   e-113

>gb|ADB85430.1| putative retrotransposon protein [Phyllostachys edulis]
          Length = 896

 Score =  364 bits (935), Expect(2) = e-119
 Identities = 173/224 (77%), Positives = 199/224 (88%)
 Frame = -2

Query: 674  RGYVPMSNGIVILKENCPKSSYDKDRMSKVPYASAIGSIMYAMICTRPDVSYALSMTSRY 495
            RG++PM++GI + K  CP ++ ++D+MS +PYASAIGSIMYAMICTRPDVSYALS+TSRY
Sbjct: 643  RGFLPMAHGINLSKNQCPTTTDERDKMSDIPYASAIGSIMYAMICTRPDVSYALSVTSRY 702

Query: 494  QSNPGEGHWTAVKNILKYLKRTKDSFLIYGEDEKLVVRGYTDASFQTDRDDTVSRSGFVF 315
            Q++P EGHWTAVKNILKYL+RTKD FL+YG DE+LVV GYTDASFQTD+DD  S+SGFVF
Sbjct: 703  QADPSEGHWTAVKNILKYLRRTKDVFLVYGGDEELVVNGYTDASFQTDKDDYRSQSGFVF 762

Query: 314  CLNGGTVSWKSSKQETVADSTMEAEYITASEAAKEAVWIRNFITGLGVVPSIADPVDLYC 135
             LNGG VSWKSSKQETVADST EAEYI ASEAAKE VWIRNFIT LG+VPS + P+DLYC
Sbjct: 763  ILNGGAVSWKSSKQETVADSTTEAEYIAASEAAKEGVWIRNFITELGMVPSASSPMDLYC 822

Query: 134  DNNGAIAQAKEPRSHSKAKHILRRYHLLREINDIGDIHICKVHT 3
            DNNGAIAQAKEPRSH K+KHILRRYHL+RE+ D GD+ ICKVHT
Sbjct: 823  DNNGAIAQAKEPRSHQKSKHILRRYHLIRELVDRGDVKICKVHT 866



 Score = 92.4 bits (228), Expect(2) = e-119
 Identities = 47/62 (75%), Positives = 53/62 (85%)
 Frame = -3

Query: 853 NDIPSL*AVKTWLRKSFSMKDLGNATYILGIRIYKDISKRLIGLSQSTYIDKVLHRFGMQ 674
           NDIP L +VK+ LRKSFSMKDLG+A YILGIRIY+D SKRLIGLSQ  YIDKVL+RF MQ
Sbjct: 580 NDIPMLESVKSSLRKSFSMKDLGDAAYILGIRIYRDRSKRLIGLSQEMYIDKVLNRFNMQ 639

Query: 673 EA 668
            +
Sbjct: 640 NS 641


>dbj|BAA22288.1| polyprotein [Oryza australiensis]
          Length = 1317

 Score =  352 bits (904), Expect(2) = e-115
 Identities = 167/224 (74%), Positives = 195/224 (87%)
 Frame = -2

Query: 674  RGYVPMSNGIVILKENCPKSSYDKDRMSKVPYASAIGSIMYAMICTRPDVSYALSMTSRY 495
            +G++PMS+GI + K  CP++  ++++M  VPYASAIGSIMYAM+CTRPDVSYALS TSRY
Sbjct: 1063 KGFLPMSHGINLSKNQCPQTHDERNKMGMVPYASAIGSIMYAMLCTRPDVSYALSATSRY 1122

Query: 494  QSNPGEGHWTAVKNILKYLKRTKDSFLIYGEDEKLVVRGYTDASFQTDRDDTVSRSGFVF 315
            QS+PGEGHWTAVKNILKYL+RTKD FL+YG +E LVV GYTDASFQTD+DD  S+SGFVF
Sbjct: 1123 QSDPGEGHWTAVKNILKYLRRTKDMFLVYGGEEDLVVSGYTDASFQTDKDDYRSQSGFVF 1182

Query: 314  CLNGGTVSWKSSKQETVADSTMEAEYITASEAAKEAVWIRNFITGLGVVPSIADPVDLYC 135
            CLNGG VSWKSSKQ+TVADST EAEYI ASEAAKEAVWI+ F++ LGV+ S   P+ LYC
Sbjct: 1183 CLNGGAVSWKSSKQDTVADSTTEAEYIAASEAAKEAVWIKKFVSELGVMTSTTGPMSLYC 1242

Query: 134  DNNGAIAQAKEPRSHSKAKHILRRYHLLREINDIGDIHICKVHT 3
            DN+GAIAQAKEPRSH K+KHILRRYHL+REI D GD+ ICKVHT
Sbjct: 1243 DNSGAIAQAKEPRSHQKSKHILRRYHLIREIVDRGDVKICKVHT 1286



 Score = 90.9 bits (224), Expect(2) = e-115
 Identities = 46/62 (74%), Positives = 52/62 (83%)
 Frame = -3

Query: 853  NDIPSL*AVKTWLRKSFSMKDLGNATYILGIRIYKDISKRLIGLSQSTYIDKVLHRFGMQ 674
            NDIP L +VK+ L+ SFSMKDLG A YILGIRIY+D SKRLIGLSQSTYIDKVL RF M 
Sbjct: 1000 NDIPMLESVKSSLKNSFSMKDLGEAAYILGIRIYRDRSKRLIGLSQSTYIDKVLKRFNMH 1059

Query: 673  EA 668
            ++
Sbjct: 1060 DS 1061


>gb|ADB85429.1| putative retrotransposon protein [Phyllostachys edulis]
          Length = 1313

 Score =  353 bits (905), Expect(2) = e-115
 Identities = 170/224 (75%), Positives = 196/224 (87%)
 Frame = -2

Query: 674  RGYVPMSNGIVILKENCPKSSYDKDRMSKVPYASAIGSIMYAMICTRPDVSYALSMTSRY 495
            +G++PMS+GI   K   P ++ ++DRM+ +PYASAIGSIMYAMICTR DVSYALS+TSRY
Sbjct: 1059 KGFLPMSHGISPSKSQRPSTTDERDRMNGIPYASAIGSIMYAMICTRQDVSYALSVTSRY 1118

Query: 494  QSNPGEGHWTAVKNILKYLKRTKDSFLIYGEDEKLVVRGYTDASFQTDRDDTVSRSGFVF 315
            Q++PGE HWTAVKNILKYL+RTKD+FLIYG DE+LVV GYTDASFQTD+DD  S+SGFVF
Sbjct: 1119 QADPGECHWTAVKNILKYLRRTKDAFLIYGGDEELVVNGYTDASFQTDKDDYRSQSGFVF 1178

Query: 314  CLNGGTVSWKSSKQETVADSTMEAEYITASEAAKEAVWIRNFITGLGVVPSIADPVDLYC 135
             LNGG VSWKSSKQETVADST +AEYI ASEAAKE VWIRNFI  LGVVPS + P+DLYC
Sbjct: 1179 ILNGGAVSWKSSKQETVADSTTKAEYIAASEAAKEGVWIRNFIAELGVVPSASSPMDLYC 1238

Query: 134  DNNGAIAQAKEPRSHSKAKHILRRYHLLREINDIGDIHICKVHT 3
            DNNGAIAQAKEPRSH K+KHILRRYHL+RE+ D GD+ ICK+HT
Sbjct: 1239 DNNGAIAQAKEPRSHQKSKHILRRYHLIRELVDRGDVKICKIHT 1282



 Score = 88.2 bits (217), Expect(2) = e-115
 Identities = 45/60 (75%), Positives = 50/60 (83%)
 Frame = -3

Query: 853  NDIPSL*AVKTWLRKSFSMKDLGNATYILGIRIYKDISKRLIGLSQSTYIDKVLHRFGMQ 674
            NDIP L +VK  L+ SFSMKDLG A YILGI+IY+D S+RLIGLSQSTYIDKVL RF MQ
Sbjct: 996  NDIPMLESVKASLKNSFSMKDLGEAAYILGIKIYRDRSRRLIGLSQSTYIDKVLIRFNMQ 1055


>gb|ABF97047.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 1248

 Score =  341 bits (874), Expect(2) = e-113
 Identities = 161/224 (71%), Positives = 194/224 (86%)
 Frame = -2

Query: 674  RGYVPMSNGIVILKENCPKSSYDKDRMSKVPYASAIGSIMYAMICTRPDVSYALSMTSRY 495
            +G++PMS+GI + K  CP+++ ++++MS +PYASAIGSIMYAM+CTR DVSYALS TSRY
Sbjct: 1012 KGFLPMSHGINLGKNQCPQTTDERNKMSVIPYASAIGSIMYAMLCTRLDVSYALSATSRY 1071

Query: 494  QSNPGEGHWTAVKNILKYLKRTKDSFLIYGEDEKLVVRGYTDASFQTDRDDTVSRSGFVF 315
            QS+ GE HW AVKNILKYL+RTKD FL+YG  E+LVV GYTDASFQTD+DD  S+SGFVF
Sbjct: 1072 QSDLGESHWIAVKNILKYLRRTKDMFLVYGRQEELVVNGYTDASFQTDKDDFRSQSGFVF 1131

Query: 314  CLNGGTVSWKSSKQETVADSTMEAEYITASEAAKEAVWIRNFITGLGVVPSIADPVDLYC 135
            CLNGG VSWKSSKQ+TVADST EAEYI ASEAAKEAVWI+ F++ LGV+ S + P+DLYC
Sbjct: 1132 CLNGGAVSWKSSKQDTVADSTTEAEYIAASEAAKEAVWIKKFVSQLGVMTSASSPMDLYC 1191

Query: 134  DNNGAIAQAKEPRSHSKAKHILRRYHLLREINDIGDIHICKVHT 3
            DN+GAIAQAKEPRSH K+KHILRRYHL+RE+   GD+ ICK+HT
Sbjct: 1192 DNSGAIAQAKEPRSHQKSKHILRRYHLIREMVGRGDVKICKIHT 1235



 Score = 93.6 bits (231), Expect(2) = e-113
 Identities = 48/62 (77%), Positives = 53/62 (85%)
 Frame = -3

Query: 853  NDIPSL*AVKTWLRKSFSMKDLGNATYILGIRIYKDISKRLIGLSQSTYIDKVLHRFGMQ 674
            NDIP L +VKT L+ SFSMKDLG A YILGIRIY+D SKRLIGLSQSTYIDKVL RF MQ
Sbjct: 949  NDIPMLESVKTSLKYSFSMKDLGEAAYILGIRIYRDRSKRLIGLSQSTYIDKVLKRFNMQ 1008

Query: 673  EA 668
            ++
Sbjct: 1009 DS 1010


>gb|AAP44605.1| putative polyprotein [Oryza sativa Japonica Group]
          Length = 1161

 Score =  341 bits (874), Expect(2) = e-113
 Identities = 161/224 (71%), Positives = 194/224 (86%)
 Frame = -2

Query: 674  RGYVPMSNGIVILKENCPKSSYDKDRMSKVPYASAIGSIMYAMICTRPDVSYALSMTSRY 495
            +G++PMS+GI + K  CP+++ ++++MS +PYASAIGSIMYAM+CTR DVSYALS TSRY
Sbjct: 925  KGFLPMSHGINLGKNQCPQTTDERNKMSVIPYASAIGSIMYAMLCTRLDVSYALSATSRY 984

Query: 494  QSNPGEGHWTAVKNILKYLKRTKDSFLIYGEDEKLVVRGYTDASFQTDRDDTVSRSGFVF 315
            QS+ GE HW AVKNILKYL+RTKD FL+YG  E+LVV GYTDASFQTD+DD  S+SGFVF
Sbjct: 985  QSDLGESHWIAVKNILKYLRRTKDMFLVYGRQEELVVNGYTDASFQTDKDDFRSQSGFVF 1044

Query: 314  CLNGGTVSWKSSKQETVADSTMEAEYITASEAAKEAVWIRNFITGLGVVPSIADPVDLYC 135
            CLNGG VSWKSSKQ+TVADST EAEYI ASEAAKEAVWI+ F++ LGV+ S + P+DLYC
Sbjct: 1045 CLNGGAVSWKSSKQDTVADSTTEAEYIAASEAAKEAVWIKKFVSQLGVMTSASSPMDLYC 1104

Query: 134  DNNGAIAQAKEPRSHSKAKHILRRYHLLREINDIGDIHICKVHT 3
            DN+GAIAQAKEPRSH K+KHILRRYHL+RE+   GD+ ICK+HT
Sbjct: 1105 DNSGAIAQAKEPRSHQKSKHILRRYHLIREMVGRGDVKICKIHT 1148



 Score = 93.6 bits (231), Expect(2) = e-113
 Identities = 48/62 (77%), Positives = 53/62 (85%)
 Frame = -3

Query: 853  NDIPSL*AVKTWLRKSFSMKDLGNATYILGIRIYKDISKRLIGLSQSTYIDKVLHRFGMQ 674
            NDIP L +VKT L+ SFSMKDLG A YILGIRIY+D SKRLIGLSQSTYIDKVL RF MQ
Sbjct: 862  NDIPMLESVKTSLKYSFSMKDLGEAAYILGIRIYRDRSKRLIGLSQSTYIDKVLKRFNMQ 921

Query: 673  EA 668
            ++
Sbjct: 922  DS 923