BLASTX nr result

ID: Angelica23_contig00014804 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica23_contig00014804
         (268 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAG60117.1|AC073555_1 copia-type polyprotein, putative [Arabi...   142   2e-32
gb|AAF16534.1|AC013482_8 T26F17.17 [Arabidopsis thaliana]             142   2e-32
gb|AAG50698.1|AC079604_5 copia-type polyprotein, putative [Arabi...   142   2e-32
emb|CAB71063.1| copia-type polyprotein [Arabidopsis thaliana]         142   2e-32
gb|AAD50001.1|AC007259_14 Hypothetical protein [Arabidopsis thal...   142   2e-32

>gb|AAG60117.1|AC073555_1 copia-type polyprotein, putative [Arabidopsis thaliana]
          Length = 1352

 Score =  142 bits (359), Expect = 2e-32
 Identities = 65/89 (73%), Positives = 76/89 (85%)
 Frame = -1

Query: 268  FTWYSKKQPIVALSTCEAEYVAASHCVCHAIWLRRLLSELRIPQQKPTEVCIDNKSAIEL 89
            FTW SKKQPIV LSTCEAEYVAA+ CVCHAIWLR LL EL +PQ++PT++ +DNKSAI L
Sbjct: 1220 FTWMSKKQPIVVLSTCEAEYVAATSCVCHAIWLRNLLKELSLPQEEPTKIFVDNKSAIAL 1279

Query: 88   AKNPVHHERSKHIDVRFHFIREHVKEKRV 2
            AKNPV H+RSKHID R+H+IRE V +K V
Sbjct: 1280 AKNPVFHDRSKHIDTRYHYIRECVSKKDV 1308


>gb|AAF16534.1|AC013482_8 T26F17.17 [Arabidopsis thaliana]
          Length = 1291

 Score =  142 bits (359), Expect = 2e-32
 Identities = 65/89 (73%), Positives = 76/89 (85%)
 Frame = -1

Query: 268  FTWYSKKQPIVALSTCEAEYVAASHCVCHAIWLRRLLSELRIPQQKPTEVCIDNKSAIEL 89
            FTW SKKQPIV LSTCEAEYVAA+ CVCHAIWLR LL EL +PQ++PT++ +DNKSAI L
Sbjct: 1159 FTWMSKKQPIVTLSTCEAEYVAATSCVCHAIWLRNLLKELSLPQEEPTKIFVDNKSAIAL 1218

Query: 88   AKNPVHHERSKHIDVRFHFIREHVKEKRV 2
            AKNPV H+RSKHID R+H+IRE V +K V
Sbjct: 1219 AKNPVFHDRSKHIDTRYHYIRECVSKKDV 1247


>gb|AAG50698.1|AC079604_5 copia-type polyprotein, putative [Arabidopsis thaliana]
            gi|12321387|gb|AAG50765.1|AC079131_10 copia-type
            polyprotein, putative [Arabidopsis thaliana]
          Length = 1320

 Score =  142 bits (359), Expect = 2e-32
 Identities = 65/89 (73%), Positives = 76/89 (85%)
 Frame = -1

Query: 268  FTWYSKKQPIVALSTCEAEYVAASHCVCHAIWLRRLLSELRIPQQKPTEVCIDNKSAIEL 89
            FTW SKKQPIV LSTCEAEYVAA+ CVCHAIWLR LL EL +PQ++PT++ +DNKSAI L
Sbjct: 1188 FTWMSKKQPIVTLSTCEAEYVAATSCVCHAIWLRNLLKELSLPQEEPTKIFVDNKSAIAL 1247

Query: 88   AKNPVHHERSKHIDVRFHFIREHVKEKRV 2
            AKNPV H+RSKHID R+H+IRE V +K V
Sbjct: 1248 AKNPVFHDRSKHIDTRYHYIRECVSKKDV 1276


>emb|CAB71063.1| copia-type polyprotein [Arabidopsis thaliana]
          Length = 1352

 Score =  142 bits (359), Expect = 2e-32
 Identities = 65/89 (73%), Positives = 76/89 (85%)
 Frame = -1

Query: 268  FTWYSKKQPIVALSTCEAEYVAASHCVCHAIWLRRLLSELRIPQQKPTEVCIDNKSAIEL 89
            FTW SKKQPIV LSTCEAEYVAA+ CVCHAIWLR LL EL +PQ++PT++ +DNKSAI L
Sbjct: 1220 FTWMSKKQPIVTLSTCEAEYVAATSCVCHAIWLRNLLKELSLPQEEPTKIFVDNKSAIAL 1279

Query: 88   AKNPVHHERSKHIDVRFHFIREHVKEKRV 2
            AKNPV H+RSKHID R+H+IRE V +K V
Sbjct: 1280 AKNPVFHDRSKHIDTRYHYIRECVSKKDV 1308


>gb|AAD50001.1|AC007259_14 Hypothetical protein [Arabidopsis thaliana]
          Length = 1352

 Score =  142 bits (359), Expect = 2e-32
 Identities = 65/89 (73%), Positives = 76/89 (85%)
 Frame = -1

Query: 268  FTWYSKKQPIVALSTCEAEYVAASHCVCHAIWLRRLLSELRIPQQKPTEVCIDNKSAIEL 89
            FTW SKKQPIV LSTCEAEYVAA+ CVCHAIWLR LL EL +PQ++PT++ +DNKSAI L
Sbjct: 1220 FTWMSKKQPIVTLSTCEAEYVAATSCVCHAIWLRNLLKELSLPQEEPTKIFVDNKSAIAL 1279

Query: 88   AKNPVHHERSKHIDVRFHFIREHVKEKRV 2
            AKNPV H+RSKHID R+H+IRE V +K V
Sbjct: 1280 AKNPVFHDRSKHIDTRYHYIRECVSKKDV 1308


Top