BLASTX nr result

ID: Angelica23_contig00014662 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica23_contig00014662
         (639 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002314284.1| predicted protein [Populus trichocarpa] gi|2...   214   1e-53
gb|ABK95685.1| unknown [Populus trichocarpa]                          214   1e-53
gb|ABK96391.1| unknown [Populus trichocarpa x Populus deltoides]      213   2e-53
ref|XP_002285257.1| PREDICTED: exosome complex component MTR3 [V...   211   9e-53
ref|XP_003606365.1| Exosome complex exonuclease MTR3 [Medicago t...   206   2e-51

>ref|XP_002314284.1| predicted protein [Populus trichocarpa] gi|222850692|gb|EEE88239.1|
           predicted protein [Populus trichocarpa]
          Length = 257

 Score =  214 bits (544), Expect = 1e-53
 Identities = 104/130 (80%), Positives = 120/130 (92%)
 Frame = +2

Query: 2   HKALEGAIILDTFPKTTVDVFALVLESGGSDLPVVISCASLALADAGIILYDLISAVSVS 181
           HKALEGAI+L+TFPKTTVDVFALVLESGGSDLPVVISCASLALADAGI++YDL++ VSVS
Sbjct: 120 HKALEGAIMLETFPKTTVDVFALVLESGGSDLPVVISCASLALADAGIMMYDLVAGVSVS 179

Query: 182 CLGKNLVIDPVSEEESYQEGGLMITSMVSRNEITQLAITGEWSTPKLNEAMELCLAACSK 361
           CLG+NL+IDP+ EEES+Q+G LMIT M SR E+TQL+ITGEWST KLNEAM+LCL ACSK
Sbjct: 180 CLGRNLIIDPILEEESFQDGSLMITCMPSRYEVTQLSITGEWSTAKLNEAMQLCLDACSK 239

Query: 362 LGEVMSACLK 391
           L ++M ACLK
Sbjct: 240 LDKIMRACLK 249


>gb|ABK95685.1| unknown [Populus trichocarpa]
          Length = 257

 Score =  214 bits (544), Expect = 1e-53
 Identities = 104/130 (80%), Positives = 120/130 (92%)
 Frame = +2

Query: 2   HKALEGAIILDTFPKTTVDVFALVLESGGSDLPVVISCASLALADAGIILYDLISAVSVS 181
           HKALEGAI+L+TFPKTTVDVFALVLESGGSDLPVVISCASLALADAGI++YDL++ VSVS
Sbjct: 120 HKALEGAIMLETFPKTTVDVFALVLESGGSDLPVVISCASLALADAGIMMYDLVAGVSVS 179

Query: 182 CLGKNLVIDPVSEEESYQEGGLMITSMVSRNEITQLAITGEWSTPKLNEAMELCLAACSK 361
           CLG+NL+IDP+ EEES+Q+G LMIT M SR E+TQL+ITGEWST KLNEAM+LCL ACSK
Sbjct: 180 CLGRNLIIDPILEEESFQDGSLMITCMPSRYEVTQLSITGEWSTAKLNEAMQLCLDACSK 239

Query: 362 LGEVMSACLK 391
           L ++M ACLK
Sbjct: 240 LDKIMRACLK 249


>gb|ABK96391.1| unknown [Populus trichocarpa x Populus deltoides]
          Length = 257

 Score =  213 bits (542), Expect = 2e-53
 Identities = 104/130 (80%), Positives = 119/130 (91%)
 Frame = +2

Query: 2   HKALEGAIILDTFPKTTVDVFALVLESGGSDLPVVISCASLALADAGIILYDLISAVSVS 181
           HKALEGAI+L+TFPKTTVDVFALVLESGGSDLPVVISCASLALADAGI++YDL++ VSVS
Sbjct: 120 HKALEGAIMLETFPKTTVDVFALVLESGGSDLPVVISCASLALADAGIMMYDLVAGVSVS 179

Query: 182 CLGKNLVIDPVSEEESYQEGGLMITSMVSRNEITQLAITGEWSTPKLNEAMELCLAACSK 361
           CLG+NL+IDP+ EEES+Q+G LMIT M SR E+TQL+ITGEWST KLNEAM LCL ACSK
Sbjct: 180 CLGRNLIIDPILEEESFQDGSLMITCMPSRYEVTQLSITGEWSTAKLNEAMHLCLDACSK 239

Query: 362 LGEVMSACLK 391
           L ++M ACLK
Sbjct: 240 LDKIMRACLK 249


>ref|XP_002285257.1| PREDICTED: exosome complex component MTR3 [Vitis vinifera]
           gi|147834996|emb|CAN61380.1| hypothetical protein
           VITISV_037546 [Vitis vinifera]
           gi|297746275|emb|CBI16331.3| unnamed protein product
           [Vitis vinifera]
          Length = 254

 Score =  211 bits (537), Expect = 9e-53
 Identities = 99/130 (76%), Positives = 121/130 (93%)
 Frame = +2

Query: 2   HKALEGAIILDTFPKTTVDVFALVLESGGSDLPVVISCASLALADAGIILYDLISAVSVS 181
           HKALEGAII+++FPKTTVDVFALVLESGGSDLPVVISCASLALADAGI++YDL+++VSVS
Sbjct: 117 HKALEGAIIVESFPKTTVDVFALVLESGGSDLPVVISCASLALADAGIMMYDLVASVSVS 176

Query: 182 CLGKNLVIDPVSEEESYQEGGLMITSMVSRNEITQLAITGEWSTPKLNEAMELCLAACSK 361
           CLGKNLVIDP+ EEESYQ+G L+IT M SRNE+TQL + GEWSTP+++EAM++CL ACSK
Sbjct: 177 CLGKNLVIDPILEEESYQDGSLLITCMPSRNEVTQLTVNGEWSTPRVHEAMQICLEACSK 236

Query: 362 LGEVMSACLK 391
           L +++ +CLK
Sbjct: 237 LAKIIRSCLK 246


>ref|XP_003606365.1| Exosome complex exonuclease MTR3 [Medicago truncatula]
           gi|355507420|gb|AES88562.1| Exosome complex exonuclease
           MTR3 [Medicago truncatula]
          Length = 258

 Score =  206 bits (525), Expect = 2e-51
 Identities = 101/130 (77%), Positives = 117/130 (90%)
 Frame = +2

Query: 2   HKALEGAIILDTFPKTTVDVFALVLESGGSDLPVVISCASLALADAGIILYDLISAVSVS 181
           HKALEGAIILD+FPKTTVDVFALVLES GSDLPVVIS ASLALADAGI++YDL+++VSVS
Sbjct: 118 HKALEGAIILDSFPKTTVDVFALVLESSGSDLPVVISVASLALADAGILMYDLVASVSVS 177

Query: 182 CLGKNLVIDPVSEEESYQEGGLMITSMVSRNEITQLAITGEWSTPKLNEAMELCLAACSK 361
           CLGKNLVIDP+ EEE+ Q+G LMIT M SR EITQL +TGEWSTPK+NE M+LCL AC+K
Sbjct: 178 CLGKNLVIDPIFEEENSQDGSLMITCMPSRYEITQLTVTGEWSTPKINEGMQLCLDACAK 237

Query: 362 LGEVMSACLK 391
           L ++M +CLK
Sbjct: 238 LAKIMRSCLK 247


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