BLASTX nr result

ID: Angelica23_contig00014520 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica23_contig00014520
         (1154 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI36837.3| unnamed protein product [Vitis vinifera]              394   e-107
ref|XP_002267393.1| PREDICTED: mismatch repair endonuclease PMS2...   376   e-102
ref|XP_004136035.1| PREDICTED: mismatch repair endonuclease PMS2...   367   2e-99
ref|XP_002523056.1| DNA mismatch repair protein pms2, putative [...   363   4e-98
ref|XP_002321013.1| predicted protein [Populus trichocarpa] gi|2...   358   2e-96

>emb|CBI36837.3| unnamed protein product [Vitis vinifera]
          Length = 854

 Score =  394 bits (1012), Expect = e-107
 Identities = 218/377 (57%), Positives = 265/377 (70%), Gaps = 3/377 (0%)
 Frame = -2

Query: 1150 NEGADVVKNTDLGSSKKCQPDRACNETDHIS-SSGTMNSREYGQELMIQEEQLSSADSAL 974
            N+ A ++++     SK    D A + T++   S G +N  + G++L   E  L  AD   
Sbjct: 465  NDSAGIIESEP---SKFLGVDSAFDATENPHYSGGNINDEKAGEDLENHETPLPPAD--- 518

Query: 973  LVTTTNNISSESR--DTLATPMLVQSSGLAADASVRSSALNTGFTLNFSFNDLKTRRDQR 800
             V TT ++S E    D       VQ + +  D  + SS L    TL FSF +L+TRR QR
Sbjct: 519  -VATTASLSEEKNISDLSGVASAVQDTPVL-DTPMPSSDLKICSTLQFSFEELRTRRHQR 576

Query: 799  LRRLKAISSSKERNKSETCYTAATLKSSQLGNIDDKEVALAAATNELERHFNKKDFGRMK 620
            L RL++ S    R  +E CY+AATL+ SQ  N + K  ALAAAT ELE+ F K+DFGRMK
Sbjct: 577  LSRLQSSSYKCGRTTTERCYSAATLEFSQPENEERKVRALAAATTELEKLFKKQDFGRMK 636

Query: 619  VIGQFNLGFIIGKLDKDLFIVDQHAADEKYNYERLSLSTILNQQXXXXXXXXXXXXXXXX 440
            VIGQFNLGFIIGKLD+DLFIVDQHAADEKYN+E L+ ST+LNQQ                
Sbjct: 637  VIGQFNLGFIIGKLDQDLFIVDQHAADEKYNFEHLAQSTVLNQQPLLRPLRLDLSPEEEV 696

Query: 439  XVAMHMDTIRKNGFALEEDLHAPLGQRFRLRAVPFSKNITFGVVDVKELISILADSQGEC 260
              ++HMD IRKNGFALEEDLHAP GQRF+L+AVPFSKNITFGV DVKELIS LAD QGEC
Sbjct: 697  IASIHMDIIRKNGFALEEDLHAPPGQRFKLKAVPFSKNITFGVEDVKELISTLADGQGEC 756

Query: 259  SMIGSYRMDTADSVCPPRVRAMLASRACKSSVMIGTSLSRIEMQKILKHLADLKSPWNCP 80
            S++G+Y+MDT DS+CP RVRAMLASRAC+SSVMIG  L R EMQ+IL+HL+DLKSPWNCP
Sbjct: 757  SILGTYKMDTCDSICPSRVRAMLASRACRSSVMIGDPLGRKEMQRILEHLSDLKSPWNCP 816

Query: 79   HGRPTMRHLVDLTTLHR 29
            HGRPTMRHLVDLTT+++
Sbjct: 817  HGRPTMRHLVDLTTIYK 833


>ref|XP_002267393.1| PREDICTED: mismatch repair endonuclease PMS2-like [Vitis vinifera]
          Length = 937

 Score =  376 bits (965), Expect = e-102
 Identities = 212/377 (56%), Positives = 256/377 (67%), Gaps = 3/377 (0%)
 Frame = -2

Query: 1150 NEGADVVKNTDLGSSKKCQPDRACNETDHIS-SSGTMNSREYGQELMIQEEQLSSADSAL 974
            N+ A ++++     SK    D A + T++   S G +N  + G++L   E  L  AD   
Sbjct: 566  NDSAGIIESEP---SKFLGVDSAFDATENPHYSGGNINDEKAGEDLENHETPLPPAD--- 619

Query: 973  LVTTTNNISSESR--DTLATPMLVQSSGLAADASVRSSALNTGFTLNFSFNDLKTRRDQR 800
             V TT ++S E    D       VQ + +  D  + SS L    TL FSF +L+TRR QR
Sbjct: 620  -VATTASLSEEKNISDLSGVASAVQDTPVL-DTPMPSSDLKICSTLQFSFEELRTRRHQR 677

Query: 799  LRRLKAISSSKERNKSETCYTAATLKSSQLGNIDDKEVALAAATNELERHFNKKDFGRMK 620
                              CY+AATL+ SQ  N + K  ALAAAT ELE+ F K+DFGRMK
Sbjct: 678  ------------------CYSAATLEFSQPENEERKVRALAAATTELEKLFKKQDFGRMK 719

Query: 619  VIGQFNLGFIIGKLDKDLFIVDQHAADEKYNYERLSLSTILNQQXXXXXXXXXXXXXXXX 440
            VIGQFNLGFIIGKLD+DLFIVDQHAADEKYN+E L+ ST+LNQQ                
Sbjct: 720  VIGQFNLGFIIGKLDQDLFIVDQHAADEKYNFEHLAQSTVLNQQPLLRPLRLDLSPEEEV 779

Query: 439  XVAMHMDTIRKNGFALEEDLHAPLGQRFRLRAVPFSKNITFGVVDVKELISILADSQGEC 260
              ++HMD IRKNGFALEEDLHAP GQRF+L+AVPFSKNITFGV DVKELIS LAD QGEC
Sbjct: 780  IASIHMDIIRKNGFALEEDLHAPPGQRFKLKAVPFSKNITFGVEDVKELISTLADGQGEC 839

Query: 259  SMIGSYRMDTADSVCPPRVRAMLASRACKSSVMIGTSLSRIEMQKILKHLADLKSPWNCP 80
            S++G+Y+MDT DS+CP RVRAMLASRAC+SSVMIG  L R EMQ+IL+HL+DLKSPWNCP
Sbjct: 840  SILGTYKMDTCDSICPSRVRAMLASRACRSSVMIGDPLGRKEMQRILEHLSDLKSPWNCP 899

Query: 79   HGRPTMRHLVDLTTLHR 29
            HGRPTMRHLVDLTT+++
Sbjct: 900  HGRPTMRHLVDLTTIYK 916


>ref|XP_004136035.1| PREDICTED: mismatch repair endonuclease PMS2-like [Cucumis sativus]
            gi|449498483|ref|XP_004160549.1| PREDICTED: mismatch
            repair endonuclease PMS2-like [Cucumis sativus]
          Length = 921

 Score =  367 bits (943), Expect = 2e-99
 Identities = 211/378 (55%), Positives = 251/378 (66%), Gaps = 3/378 (0%)
 Frame = -2

Query: 1138 DVVKNTDLGSSKKCQPDRACNETDHISSSGTMNSREYGQELMIQEEQLSSADSALLVTT- 962
            D V   D   S + + DR  ++  ++  S   +S +         E ++   S+++ +T 
Sbjct: 544  DFVVGNDEDGSIQFKTDRVVSKV-YLPPSSADHSDDGEATEECTGEAVAKVHSSVIESTA 602

Query: 961  --TNNISSESRDTLATPMLVQSSGLAADASVRSSALNTGFTLNFSFNDLKTRRDQRLRRL 788
              T +++  S D       +Q SG   ++S  S  L    T +F F++LK RR QR  R 
Sbjct: 603  SPTKDLAMMSEDLPLPGCSIQPSGFLKESS--SPQLKLCSTFHFDFHELKKRRFQRQLRF 660

Query: 787  KAISSSKERNKSETCYTAATLKSSQLGNIDDKEVALAAATNELERHFNKKDFGRMKVIGQ 608
            K    + ER K +  Y AATLK SQ  N D K  AL AA  EL+R F KKDF RMKVIGQ
Sbjct: 661  KLNGYTCERKKLKCHYAAATLKLSQTDNEDRKARALEAAARELDRLFRKKDFSRMKVIGQ 720

Query: 607  FNLGFIIGKLDKDLFIVDQHAADEKYNYERLSLSTILNQQXXXXXXXXXXXXXXXXXVAM 428
            FNLGFIIGKLD+DLFIVDQHAADEKYN+ERLS STILNQQ                 V++
Sbjct: 721  FNLGFIIGKLDQDLFIVDQHAADEKYNFERLSQSTILNQQPLLRPLGLELSAEEEVVVSI 780

Query: 427  HMDTIRKNGFALEEDLHAPLGQRFRLRAVPFSKNITFGVVDVKELISILADSQGECSMIG 248
            HMD  RKNGF +EED  +  G RFRL+AVPFSKNITFGV DVK+LIS LADS+GECS+IG
Sbjct: 781  HMDVFRKNGFTIEEDPRSLPGNRFRLKAVPFSKNITFGVEDVKDLISTLADSEGECSIIG 840

Query: 247  SYRMDTADSVCPPRVRAMLASRACKSSVMIGTSLSRIEMQKILKHLADLKSPWNCPHGRP 68
            SYRMDTADSVCP RVRAMLASRAC+SSVMIG  L R EMQKIL+HLA+LKSPWNCPHGRP
Sbjct: 841  SYRMDTADSVCPSRVRAMLASRACRSSVMIGDPLGRNEMQKILEHLAELKSPWNCPHGRP 900

Query: 67   TMRHLVDLTTLHRRLNSE 14
            TMRHLVDLTT+ R   SE
Sbjct: 901  TMRHLVDLTTVKRSEESE 918


>ref|XP_002523056.1| DNA mismatch repair protein pms2, putative [Ricinus communis]
            gi|223537618|gb|EEF39241.1| DNA mismatch repair protein
            pms2, putative [Ricinus communis]
          Length = 924

 Score =  363 bits (932), Expect = 4e-98
 Identities = 197/331 (59%), Positives = 233/331 (70%), Gaps = 2/331 (0%)
 Frame = -2

Query: 988  ADSALLVTTTNNISSESRDTLATPMLVQSSGLAADASVRSSALNTGFTLNFSFNDLKTRR 809
            AD A   + +  + + S D + T   +QSS    D   + SA     TL F+F +LK +R
Sbjct: 595  ADVAPDTSPSRGLENMSEDLILTAPPLQSSSALLDVP-KPSAHEICSTLQFNFQELKAKR 653

Query: 808  DQR--LRRLKAISSSKERNKSETCYTAATLKSSQLGNIDDKEVALAAATNELERHFNKKD 635
             QR  + +    +S   + KS   Y AATL+ SQ  N + K  ALAAAT ELER F K+D
Sbjct: 654  QQRRSILQFSGYASGGMKMKSHRTYAAATLELSQPDNEERKARALAAATTELERIFRKQD 713

Query: 634  FGRMKVIGQFNLGFIIGKLDKDLFIVDQHAADEKYNYERLSLSTILNQQXXXXXXXXXXX 455
            FGRMKVIGQFNLGFIIGKLD+DLFIVDQHAADEKYN+E L  STILNQQ           
Sbjct: 714  FGRMKVIGQFNLGFIIGKLDQDLFIVDQHAADEKYNFEHLCQSTILNQQPLLRSLRLELS 773

Query: 454  XXXXXXVAMHMDTIRKNGFALEEDLHAPLGQRFRLRAVPFSKNITFGVVDVKELISILAD 275
                   +M+M+ IRKNGFALEED HAP G RF+L+AVPFSKNITFGV DVK+LIS LAD
Sbjct: 774  PEEEVVASMNMELIRKNGFALEEDPHAPPGHRFKLKAVPFSKNITFGVEDVKDLISTLAD 833

Query: 274  SQGECSMIGSYRMDTADSVCPPRVRAMLASRACKSSVMIGTSLSRIEMQKILKHLADLKS 95
            SQG+CS+IGSY+MD +DSVCP RVR MLASRAC+SSVMIG  L R EMQKIL+HLADL S
Sbjct: 834  SQGDCSIIGSYKMDKSDSVCPSRVRTMLASRACRSSVMIGDPLGRNEMQKILEHLADLNS 893

Query: 94   PWNCPHGRPTMRHLVDLTTLHRRLNSEDEDL 2
            PWNCPHGRPTMRHLVD+T++++R    D  L
Sbjct: 894  PWNCPHGRPTMRHLVDMTSIYKRSYENDLSL 924


>ref|XP_002321013.1| predicted protein [Populus trichocarpa] gi|222861786|gb|EEE99328.1|
            predicted protein [Populus trichocarpa]
          Length = 915

 Score =  358 bits (918), Expect = 2e-96
 Identities = 201/340 (59%), Positives = 234/340 (68%), Gaps = 5/340 (1%)
 Frame = -2

Query: 1006 EEQLSSADSALLVTTT-NNISSESRDTLATPMLVQSSGLAADASVRSSALNTGFTLNFSF 830
            E+  SS D    +TT    + +   D        QSS    DA V  SA     TL FSF
Sbjct: 579  EQNSSSPDDVPSITTPCKGLGNLLEDLPVASPPAQSSIELLDAPVPFSAQQICSTLQFSF 638

Query: 829  NDLKTRRDQRLRRLKA----ISSSKERNKSETCYTAATLKSSQLGNIDDKEVALAAATNE 662
             DL +RR QRL RL++       SK  ++S   Y AATL+ SQ  N + K  ALAAAT E
Sbjct: 639  QDLHSRRMQRLSRLQSGKFTFGGSKRSHRS---YAAATLELSQPDNEERKLRALAAATTE 695

Query: 661  LERHFNKKDFGRMKVIGQFNLGFIIGKLDKDLFIVDQHAADEKYNYERLSLSTILNQQXX 482
            LER F K+DFGRMKVIGQFNLGFIIGKLD+DLFIVDQHAADEKYN+ERL  STILNQQ  
Sbjct: 696  LERLFRKEDFGRMKVIGQFNLGFIIGKLDQDLFIVDQHAADEKYNFERLCQSTILNQQPL 755

Query: 481  XXXXXXXXXXXXXXXVAMHMDTIRKNGFALEEDLHAPLGQRFRLRAVPFSKNITFGVVDV 302
                            +M++D IRKNGFALEED HA  G  F+L+AVPFSKNITFGV DV
Sbjct: 756  LRPLRLELSPEEEVVASMNLDIIRKNGFALEEDPHALPGHHFKLKAVPFSKNITFGVEDV 815

Query: 301  KELISILADSQGECSMIGSYRMDTADSVCPPRVRAMLASRACKSSVMIGTSLSRIEMQKI 122
            K+LIS LADSQGECS+I  Y+MDTADSVCP RV AM ASRAC+SSVMIG +L R EMQKI
Sbjct: 816  KDLISTLADSQGECSIISRYKMDTADSVCPSRVHAMFASRACRSSVMIGDALGRNEMQKI 875

Query: 121  LKHLADLKSPWNCPHGRPTMRHLVDLTTLHRRLNSEDEDL 2
            L+HL DLKSPWNCPHGRPTMRHL+D+++++ R +  +  L
Sbjct: 876  LEHLVDLKSPWNCPHGRPTMRHLIDMSSIYERPDETEAGL 915


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