BLASTX nr result

ID: Angelica23_contig00014446 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica23_contig00014446
         (968 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002278608.2| PREDICTED: probable ATP-dependent RNA helica...   137   3e-30
emb|CBI22072.3| unnamed protein product [Vitis vinifera]              134   4e-29
ref|XP_002520395.1| ATP-dependent RNA helicase, putative [Ricinu...   127   5e-27
ref|XP_002307569.1| predicted protein [Populus trichocarpa] gi|2...   120   5e-25
ref|XP_004161565.1| PREDICTED: LOW QUALITY PROTEIN: probable ATP...   115   1e-23

>ref|XP_002278608.2| PREDICTED: probable ATP-dependent RNA helicase YTHDC2-like [Vitis
            vinifera]
          Length = 1231

 Score =  137 bits (346), Expect = 3e-30
 Identities = 82/173 (47%), Positives = 104/173 (60%), Gaps = 10/173 (5%)
 Frame = -3

Query: 918  DDIDERVAEKHSK------SDIEGEKIMSSPENTVKVVVDRWLAFETTALDVAQVYCLRE 757
            DDIDE  +E   K      +  +GEKIMSSP+NTV VVVDRW +FE+TALDVAQ+YCLRE
Sbjct: 1012 DDIDEDDSEGDGKEANNKLNGQQGEKIMSSPDNTVAVVVDRWHSFESTALDVAQIYCLRE 1071

Query: 756  KLAAATLFKVREPRKILPENXXXXXXXXXXXXXXXXXXGASMYAIASVLSYDGRSGISET 577
            +L AA  FK    R++LP                    GAS+YAIA +LSYDG SGIS +
Sbjct: 1072 RLTAAIFFKATHAREVLP-----------------PMLGASVYAIACILSYDGLSGISLS 1114

Query: 576  LDSVDKLISMVSATEFGQAEHGTNHKIHQPNSFLNSLI----RPRDNAAHYYN 430
            L+SVD L SMV+ATE   +  G       PN+FL +L+    R +  + H+ N
Sbjct: 1115 LESVDSLTSMVNATEIDNSASGRRRMGQNPNNFLKTLMSHGTRHKSPSKHHKN 1167


>emb|CBI22072.3| unnamed protein product [Vitis vinifera]
          Length = 1190

 Score =  134 bits (336), Expect = 4e-29
 Identities = 75/151 (49%), Positives = 95/151 (62%), Gaps = 4/151 (2%)
 Frame = -3

Query: 870  EGEKIMSSPENTVKVVVDRWLAFETTALDVAQVYCLREKLAAATLFKVREPRKILPENXX 691
            +GEKIMSSP+NTV VVVDRW +FE+TALDVAQ+YCLRE+L AA  FK    R++LP    
Sbjct: 993  QGEKIMSSPDNTVAVVVDRWHSFESTALDVAQIYCLRERLTAAIFFKATHAREVLP---- 1048

Query: 690  XXXXXXXXXXXXXXXXGASMYAIASVLSYDGRSGISETLDSVDKLISMVSATEFGQAEHG 511
                            GAS+YAIA +LSYDG SGIS +L+SVD L SMV+ATE   +  G
Sbjct: 1049 -------------PMLGASVYAIACILSYDGLSGISLSLESVDSLTSMVNATEIDNSASG 1095

Query: 510  TNHKIHQPNSFLNSLI----RPRDNAAHYYN 430
                   PN+FL +L+    R +  + H+ N
Sbjct: 1096 RRRMGQNPNNFLKTLMSHGTRHKSPSKHHKN 1126


>ref|XP_002520395.1| ATP-dependent RNA helicase, putative [Ricinus communis]
            gi|223540442|gb|EEF42011.1| ATP-dependent RNA helicase,
            putative [Ricinus communis]
          Length = 1229

 Score =  127 bits (318), Expect = 5e-27
 Identities = 80/179 (44%), Positives = 102/179 (56%), Gaps = 4/179 (2%)
 Frame = -3

Query: 915  DIDERVAEKHSKSDIEGEKIMSSPENTVKVVVDRWLAFETTALDVAQVYCLREKLAAATL 736
            +ID+R+   +       EKIMSSP+N+V VVVDRWL F +TAL+VAQ+YCLRE+L+AA L
Sbjct: 1022 EIDDRLGGHND------EKIMSSPDNSVNVVVDRWLYFSSTALEVAQIYCLRERLSAAIL 1075

Query: 735  FKVREPRKILPENXXXXXXXXXXXXXXXXXXGASMYAIASVLSYDGRSGISETLDSVDKL 556
            F+V  P++ LP                     ASM A A VLSYDG+SGIS   +SVD L
Sbjct: 1076 FRVMHPKQELP-----------------PALAASMRATACVLSYDGQSGISLPQESVDSL 1118

Query: 555  ISMVSATEFGQAEHGTNHKI-HQPNSFLNSLI---RPRDNAAHYYNGKTSASRGIVNRN 391
             SMV ATE      G    + H P+ FL SL+   R +    HY N +  A +G  N N
Sbjct: 1119 ASMVDATEIDSTAPGRRKAMGHNPSGFLRSLMSNRRQQTTPHHYRNARLPAFKGKSNIN 1177


>ref|XP_002307569.1| predicted protein [Populus trichocarpa] gi|222857018|gb|EEE94565.1|
            predicted protein [Populus trichocarpa]
          Length = 1195

 Score =  120 bits (301), Expect = 5e-25
 Identities = 78/183 (42%), Positives = 99/183 (54%), Gaps = 2/183 (1%)
 Frame = -3

Query: 909  DERVAEKHSKSDIE-GEKIMSSPENTVKVVVDRWLAFETTALDVAQVYCLREKLAAATLF 733
            DE   E H K   + GE+IMSSP+N+V VVVDRWL F  TALDVAQ+YCLRE+L+AA LF
Sbjct: 1005 DEDGMEIHGKLGTQQGERIMSSPDNSVMVVVDRWLYFGATALDVAQIYCLREQLSAAILF 1064

Query: 732  KVREPRKILPENXXXXXXXXXXXXXXXXXXGASMYAIASVLSYDGRSGISETLDSVDKLI 553
            KV  P K LP                     A  Y  A +LS DG SGIS   +SV+ L 
Sbjct: 1065 KVTHPHKELP-----------------PALAAYTYTTACILSNDGLSGISLPGESVESLT 1107

Query: 552  SMVSATEFGQAEHGTNHKIHQPNSFLNSL-IRPRDNAAHYYNGKTSASRGIVNRNGQVHH 376
            SMV ATE  ++  G       PNSFL+SL    +  A  Y+N ++   R  +  +    H
Sbjct: 1108 SMVHATEIDESCSGRRGISQNPNSFLSSLKNNTQQTAPRYHNARSPNQRPTLQGSTSAGH 1167

Query: 375  HIR 367
             ++
Sbjct: 1168 SMQ 1170


>ref|XP_004161565.1| PREDICTED: LOW QUALITY PROTEIN: probable ATP-dependent RNA helicase
            DHX36-like [Cucumis sativus]
          Length = 1286

 Score =  115 bits (289), Expect = 1e-23
 Identities = 72/153 (47%), Positives = 96/153 (62%), Gaps = 4/153 (2%)
 Frame = -3

Query: 912  IDERVAEK---HSKSDIEGEK-IMSSPENTVKVVVDRWLAFETTALDVAQVYCLREKLAA 745
            IDE   EK    +KS+ + E+ IMSSP+N+V VVVDRWL F + ALD+AQ+YCLRE+L++
Sbjct: 1004 IDETAQEKMDIENKSNQQPEEMIMSSPDNSVTVVVDRWLQFWSKALDIAQLYCLRERLSS 1063

Query: 744  ATLFKVREPRKILPENXXXXXXXXXXXXXXXXXXGASMYAIASVLSYDGRSGISETLDSV 565
            A LFKV+ P  +LP                    GASM+A+A +LSYDG SGIS  L+SV
Sbjct: 1064 AILFKVKHPNGVLP-----------------PVLGASMHALACILSYDGLSGIS--LESV 1104

Query: 564  DKLISMVSATEFGQAEHGTNHKIHQPNSFLNSL 466
            + L SMV+ATE G    G +   H+  S+ + L
Sbjct: 1105 EMLTSMVNATEIGHFAPGRSIGTHKKVSWFHKL 1137


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