BLASTX nr result

ID: Angelica23_contig00014381 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica23_contig00014381
         (370 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003522417.1| PREDICTED: zinc finger CCCH domain-containin...   148   4e-34
ref|XP_002277300.1| PREDICTED: zinc finger CCCH domain-containin...   142   3e-32
ref|XP_003638527.1| Zinc finger CCCH domain-containing protein [...   133   1e-29
ref|XP_003525622.1| PREDICTED: zinc finger CCCH domain-containin...   132   4e-29
ref|XP_002318105.1| predicted protein [Populus trichocarpa] gi|2...   132   4e-29

>ref|XP_003522417.1| PREDICTED: zinc finger CCCH domain-containing protein 43-like
           [Glycine max]
          Length = 570

 Score =  148 bits (374), Expect = 4e-34
 Identities = 73/141 (51%), Positives = 90/141 (63%), Gaps = 18/141 (12%)
 Frame = -2

Query: 369 HHPDPTEAGGDTASPGRGGTSAI-----------------PLNETAPFRPVTYPPNPS-A 244
           +HPDPT  GG  +  G G  S+I                 PLNE+APF PV   PNP  +
Sbjct: 350 NHPDPTTVGGGDSPSGYGNGSSISLQGVSQSSISSWSSTRPLNESAPFVPVILSPNPGVS 409

Query: 243 PPNSEWNGYQAPVYPTPGRNLPTPPALAMNIPATGSNFYPHPRSQLIVDEFPERPGQPEC 64
           P +SEWNGYQAPVY +  R+L  P    MN PA  SN Y H + Q++V+EFPERPG+PEC
Sbjct: 410 PQSSEWNGYQAPVYLSE-RSLHPPSTYVMNNPAMESNVYMHHQKQMLVEEFPERPGEPEC 468

Query: 63  KFYLKTGDCKYRSGCKFHHPK 1
            ++LKTGDCK++S CKFHHPK
Sbjct: 469 SYFLKTGDCKFKSNCKFHHPK 489


>ref|XP_002277300.1| PREDICTED: zinc finger CCCH domain-containing protein 43 isoform 1
           [Vitis vinifera] gi|297733636|emb|CBI14883.3| unnamed
           protein product [Vitis vinifera]
          Length = 484

 Score =  142 bits (358), Expect = 3e-32
 Identities = 68/145 (46%), Positives = 89/145 (61%), Gaps = 22/145 (15%)
 Frame = -2

Query: 369 HHPDPTEAGGDTASPGRGGTSAIPL-----------------NETAPFRPVTYPPNPSAP 241
           +HPDPT AGG  +  G G   ++PL                 NE APF P+ + P    P
Sbjct: 248 NHPDPTAAGGYESPSGYGNGGSVPLQGASQSNMASWSSPRALNEPAPFVPIMFSPTQGVP 307

Query: 240 P-NSEWNGYQAPVYPTPG--RNLPTPPALAMNIPATGSNFYPH--PRSQLIVDEFPERPG 76
           P N EWNGYQAP+YP P   R++  PPA  +N  AT +N Y H   + Q ++++FPERPG
Sbjct: 308 PPNPEWNGYQAPLYPPPPPERSMHPPPAFVINNTATDANVYGHHQQQQQSLIEDFPERPG 367

Query: 75  QPECKFYLKTGDCKYRSGCKFHHPK 1
           QPEC ++LKTGDCK+R+ CK+HHPK
Sbjct: 368 QPECSYFLKTGDCKFRAACKYHHPK 392



 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 20/33 (60%), Positives = 27/33 (81%)
 Frame = -2

Query: 99  DEFPERPGQPECKFYLKTGDCKYRSGCKFHHPK 1
           +EFPERPGQ ECK+YL+TG CK+   C+++H K
Sbjct: 173 EEFPERPGQTECKYYLRTGGCKFGKACRYNHTK 205


>ref|XP_003638527.1| Zinc finger CCCH domain-containing protein [Medicago truncatula]
           gi|355504462|gb|AES85665.1| Zinc finger CCCH
           domain-containing protein [Medicago truncatula]
          Length = 511

 Score =  133 bits (335), Expect = 1e-29
 Identities = 68/141 (48%), Positives = 84/141 (59%), Gaps = 18/141 (12%)
 Frame = -2

Query: 369 HHPDPTEAGG--DTASPGRGGTSAIP---------------LNETAPFRPVTYPPNPSAP 241
           +HPDPT  GG   TA  G G T+++                 NETAPF P+   P P A 
Sbjct: 291 NHPDPTSVGGYDSTAGYGNGSTTSLQDVSQSSTPPWSSTRKFNETAPFVPIIISPTPGAS 350

Query: 240 P-NSEWNGYQAPVYPTPGRNLPTPPALAMNIPATGSNFYPHPRSQLIVDEFPERPGQPEC 64
           P +S+WNGYQAP Y +  R++  P   A+N PA   N Y H      V+EFPERPG+PEC
Sbjct: 351 PRSSDWNGYQAPFYLSE-RSMHPPSPYAVNNPAMEMNAYMHRHKHTPVEEFPERPGEPEC 409

Query: 63  KFYLKTGDCKYRSGCKFHHPK 1
            F+LKTGDCK++S CKFHHPK
Sbjct: 410 SFFLKTGDCKFKSHCKFHHPK 430


>ref|XP_003525622.1| PREDICTED: zinc finger CCCH domain-containing protein 43-like
           [Glycine max]
          Length = 490

 Score =  132 bits (331), Expect = 4e-29
 Identities = 67/143 (46%), Positives = 87/143 (60%), Gaps = 20/143 (13%)
 Frame = -2

Query: 369 HHPDPTEAGGDTASP----GRGGT--------SAIP-------LNETAPFRPVTYPPNPS 247
           +HPDPT  GG   +P    G GG+        +++P       LNE +PF P+   P   
Sbjct: 262 NHPDPTAVGGGGGNPPSGYGNGGSISLQGVSQTSVPSWSSPRTLNEASPFVPMMLSPTQG 321

Query: 246 -APPNSEWNGYQAPVYPTPGRNLPTPPALAMNIPATGSNFYPHPRSQLIVDEFPERPGQP 70
            +  +S+WNGYQA VY  P R++  P    MN PA  +N Y H + Q+ VDEFPERPG+P
Sbjct: 322 VSTQSSDWNGYQASVY-LPERSIHPPSTFVMNNPAIDTNVYMHHQKQMPVDEFPERPGEP 380

Query: 69  ECKFYLKTGDCKYRSGCKFHHPK 1
           EC F+LKTGDCK++S CKFHHPK
Sbjct: 381 ECSFFLKTGDCKFKSNCKFHHPK 403


>ref|XP_002318105.1| predicted protein [Populus trichocarpa] gi|222858778|gb|EEE96325.1|
           predicted protein [Populus trichocarpa]
          Length = 477

 Score =  132 bits (331), Expect = 4e-29
 Identities = 65/141 (46%), Positives = 86/141 (60%), Gaps = 18/141 (12%)
 Frame = -2

Query: 369 HHPDPTEAGGDTASPG--RGGTSAIP---------------LNETAPFRPVTYPPNPSAP 241
           +HPDPT  GG         GG++++P               LN+   F P+ + PN   P
Sbjct: 253 NHPDPTAVGGSDHPSTFLNGGSASLPVPSSSSVGSWSSPRALNDPTSFVPIMFSPNQGVP 312

Query: 240 PNS-EWNGYQAPVYPTPGRNLPTPPALAMNIPATGSNFYPHPRSQLIVDEFPERPGQPEC 64
           P S +WNGYQAP+YP P R+L  P + A+   AT SN Y   + Q++VDEFPERPGQP+C
Sbjct: 313 PQSPDWNGYQAPLYP-PERSLHPPLSYALINIATESNVYAPQQQQIVVDEFPERPGQPQC 371

Query: 63  KFYLKTGDCKYRSGCKFHHPK 1
            FY+K GDCK++S CK+HHPK
Sbjct: 372 SFYMKFGDCKFKSNCKYHHPK 392


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