BLASTX nr result

ID: Angelica23_contig00014304 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica23_contig00014304
         (622 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_006291840.1| rps4 gene product (mitochondrion) [Daucus ca...   188   8e-46
gb|AAW47276.1| ribosomal protein S4 [Platanus occidentalis]           184   1e-44
ref|YP_003587235.1| ribosomal protein S4 [Citrullus lanatus] gi|...   183   2e-44
ref|YP_002608399.1| ribosomal protein S4 [Vitis vinifera] gi|209...   181   7e-44
gb|AAW47270.1| ribosomal protein S4 [Calycanthus floridus]            179   3e-43

>ref|YP_006291840.1| rps4 gene product (mitochondrion) [Daucus carota subsp. sativus]
           gi|374081953|gb|AEY81145.1| ribosomal protein S4
           (mitochondrion) [Daucus carota subsp. sativus]
          Length = 279

 Score =  188 bits (477), Expect = 8e-46
 Identities = 95/99 (95%), Positives = 95/99 (95%)
 Frame = +1

Query: 1   GMVSITHFKVSRGDIISFQENDARARGEEIRRSFYIEILVEKIIGKFRDHPVRM*RRTKT 180
           GMVSITHFKVSRGDIISFQENDARARGEEIRRSFYIEI VEKIIGKFRDHPVRM RRTKT
Sbjct: 51  GMVSITHFKVSRGDIISFQENDARARGEEIRRSFYIEISVEKIIGKFRDHPVRMWRRTKT 110

Query: 181 EWFRLLKTKRGCRLLLKDRFLQQLRSSMQEEDLERTKKF 297
           EWFRLLKTKRGCRLLLKD FLQQLRSSMQEEDLERTK F
Sbjct: 111 EWFRLLKTKRGCRLLLKDGFLQQLRSSMQEEDLERTKNF 149


>gb|AAW47276.1| ribosomal protein S4 [Platanus occidentalis]
          Length = 320

 Score =  184 bits (467), Expect = 1e-44
 Identities = 92/102 (90%), Positives = 95/102 (93%)
 Frame = +1

Query: 1   GMVSITHFKVSRGDIISFQENDARARGEEIRRSFYIEILVEKIIGKFRDHPVRM*RRTKT 180
           GMVSITH KVS GD+ISFQENDAR RGEEIRRSFYI+I VEKIIGKF DHPVRM RRTKT
Sbjct: 120 GMVSITHLKVSHGDLISFQENDARTRGEEIRRSFYIDISVEKIIGKFLDHPVRMWRRTKT 179

Query: 181 EWFRLLKTKRGCRLLLKDRFLQQLRSSMQEEDLERTKKFGSK 306
           EWFRLLKTKRGCRLLLK RFLQQLRSSMQEEDLERTKKFGS+
Sbjct: 180 EWFRLLKTKRGCRLLLKSRFLQQLRSSMQEEDLERTKKFGSE 221


>ref|YP_003587235.1| ribosomal protein S4 [Citrullus lanatus]
           gi|259156791|gb|ACV96653.1| ribosomal protein S4
           [Citrullus lanatus]
          Length = 355

 Score =  183 bits (465), Expect = 2e-44
 Identities = 92/100 (92%), Positives = 93/100 (93%)
 Frame = +1

Query: 1   GMVSITHFKVSRGDIISFQENDARARGEEIRRSFYIEILVEKIIGKFRDHPVRM*RRTKT 180
           GMVSITHFKVS GD+ISFQENDAR RGEEIRR FYIEILVEKIIGKF DHPVRM RRTKT
Sbjct: 130 GMVSITHFKVSHGDLISFQENDARIRGEEIRRFFYIEILVEKIIGKFLDHPVRMWRRTKT 189

Query: 181 EWFRLLKTKRGCRLLLKDRFLQQLRSSMQEEDLERTKKFG 300
           EWF LLKTKRGCRLLLK RFLQQLRSSMQEEDLERTKKFG
Sbjct: 190 EWFHLLKTKRGCRLLLKSRFLQQLRSSMQEEDLERTKKFG 229


>ref|YP_002608399.1| ribosomal protein S4 [Vitis vinifera] gi|209954196|emb|CAQ77661.1|
           ribosomal protein S4 [Vitis vinifera]
           gi|239764730|gb|ACS15201.1| ribosomal protein S4 [Vitis
           vinifera]
          Length = 362

 Score =  181 bits (460), Expect = 7e-44
 Identities = 92/101 (91%), Positives = 93/101 (92%)
 Frame = +1

Query: 4   MVSITHFKVSRGDIISFQENDARARGEEIRRSFYIEILVEKIIGKFRDHPVRM*RRTKTE 183
           MVSITH KVS GDIISFQENDAR RGEEIRRSFYIEI VEKIIGKF DHPVRM RRTKTE
Sbjct: 138 MVSITHLKVSHGDIISFQENDARIRGEEIRRSFYIEISVEKIIGKFLDHPVRMWRRTKTE 197

Query: 184 WFRLLKTKRGCRLLLKDRFLQQLRSSMQEEDLERTKKFGSK 306
           WF LLKTKRGCRLLLK RFLQQLRSSMQEEDLERTKKFGS+
Sbjct: 198 WFHLLKTKRGCRLLLKSRFLQQLRSSMQEEDLERTKKFGSE 238


>gb|AAW47270.1| ribosomal protein S4 [Calycanthus floridus]
          Length = 319

 Score =  179 bits (455), Expect = 3e-43
 Identities = 90/102 (88%), Positives = 94/102 (92%)
 Frame = +1

Query: 1   GMVSITHFKVSRGDIISFQENDARARGEEIRRSFYIEILVEKIIGKFRDHPVRM*RRTKT 180
           GMVSITH KVS GD+ISF+ENDAR  GEEIRRSFYI+I VEKIIGKF DHPVRM RRTKT
Sbjct: 120 GMVSITHLKVSHGDLISFKENDARTCGEEIRRSFYIDISVEKIIGKFLDHPVRMWRRTKT 179

Query: 181 EWFRLLKTKRGCRLLLKDRFLQQLRSSMQEEDLERTKKFGSK 306
           EWFRLLKTKRGCRLLLK RFLQQLRSSMQEEDLERTKKFGS+
Sbjct: 180 EWFRLLKTKRGCRLLLKSRFLQQLRSSMQEEDLERTKKFGSE 221


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