BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica23_contig00014267
         (593 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004149719.1| PREDICTED: DNA-directed RNA polymerase II su...   208   5e-52
ref|XP_002313254.1| predicted protein [Populus trichocarpa] gi|1...   207   1e-51
ref|XP_002285578.1| PREDICTED: DNA-directed RNA polymerase II su...   207   1e-51
ref|XP_002517812.1| DNA-directed RNA polymerase II 13.6 kD polyp...   206   2e-51
gb|AFK46555.1| unknown [Lotus japonicus]                              204   7e-51

>ref|XP_004149719.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB11-like
           [Cucumis sativus] gi|449516703|ref|XP_004165386.1|
           PREDICTED: DNA-directed RNA polymerase II subunit
           RPB11-like [Cucumis sativus]
          Length = 116

 Score =  208 bits (530), Expect = 5e-52
 Identities = 101/103 (98%), Positives = 103/103 (100%)
 Frame = +3

Query: 66  MNAPDRYERFVVPEGTKKVSYERDTKIINAASFTIEREDHTIGNIVRMQLHRDENVLFAG 245
           MNAPDRYERFVVPEGTKKVSYERDTKIINAASFTIERE+HTIGNI+RMQLHRDENVLFAG
Sbjct: 1   MNAPDRYERFVVPEGTKKVSYERDTKIINAASFTIEREEHTIGNILRMQLHRDENVLFAG 60

Query: 246 YKLPHPLQYKIIVRIHTTSQSSPMQAYNQAINDLDKELDHLKN 374
           YKLPHPLQYKIIVRIHTTSQSSPMQAYNQAINDLDKELDHLKN
Sbjct: 61  YKLPHPLQYKIIVRIHTTSQSSPMQAYNQAINDLDKELDHLKN 103


>ref|XP_002313254.1| predicted protein [Populus trichocarpa] gi|118484276|gb|ABK94017.1|
           unknown [Populus trichocarpa]
           gi|222849662|gb|EEE87209.1| predicted protein [Populus
           trichocarpa]
          Length = 116

 Score =  207 bits (526), Expect = 1e-51
 Identities = 99/103 (96%), Positives = 103/103 (100%)
 Frame = +3

Query: 66  MNAPDRYERFVVPEGTKKVSYERDTKIINAASFTIEREDHTIGNIVRMQLHRDENVLFAG 245
           MNAPDRYERFVVPEGTKKVSYERDTKIINAASFT+EREDHTIGNI+RMQLHRD+NVLFAG
Sbjct: 1   MNAPDRYERFVVPEGTKKVSYERDTKIINAASFTVEREDHTIGNILRMQLHRDDNVLFAG 60

Query: 246 YKLPHPLQYKIIVRIHTTSQSSPMQAYNQAINDLDKELDHLKN 374
           YKLPHPL+YKIIVRIHTTSQSSPMQAYNQAINDLDKELDHLKN
Sbjct: 61  YKLPHPLKYKIIVRIHTTSQSSPMQAYNQAINDLDKELDHLKN 103


>ref|XP_002285578.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB11 [Vitis
           vinifera] gi|296082163|emb|CBI21168.3| unnamed protein
           product [Vitis vinifera]
          Length = 116

 Score =  207 bits (526), Expect = 1e-51
 Identities = 99/103 (96%), Positives = 103/103 (100%)
 Frame = +3

Query: 66  MNAPDRYERFVVPEGTKKVSYERDTKIINAASFTIEREDHTIGNIVRMQLHRDENVLFAG 245
           MNAPDRYERFVVPEGTKKVSYERDTKIINAASFT+EREDHTIGNI+RMQLHRDENVLFAG
Sbjct: 1   MNAPDRYERFVVPEGTKKVSYERDTKIINAASFTVEREDHTIGNILRMQLHRDENVLFAG 60

Query: 246 YKLPHPLQYKIIVRIHTTSQSSPMQAYNQAINDLDKELDHLKN 374
           YKLPHPLQYKII+RIHTTSQSSPMQAYNQAINDLDKELD+LKN
Sbjct: 61  YKLPHPLQYKIIIRIHTTSQSSPMQAYNQAINDLDKELDYLKN 103


>ref|XP_002517812.1| DNA-directed RNA polymerase II 13.6 kD polypeptide, putative
           [Ricinus communis] gi|223543084|gb|EEF44619.1|
           DNA-directed RNA polymerase II 13.6 kD polypeptide,
           putative [Ricinus communis]
          Length = 156

 Score =  206 bits (525), Expect = 2e-51
 Identities = 99/103 (96%), Positives = 103/103 (100%)
 Frame = +3

Query: 66  MNAPDRYERFVVPEGTKKVSYERDTKIINAASFTIEREDHTIGNIVRMQLHRDENVLFAG 245
           MNAPDRYERFVVPEGTKKVSYERDTKIINAASFT+EREDHTIGNI+RMQLHRDENVLFAG
Sbjct: 1   MNAPDRYERFVVPEGTKKVSYERDTKIINAASFTVEREDHTIGNILRMQLHRDENVLFAG 60

Query: 246 YKLPHPLQYKIIVRIHTTSQSSPMQAYNQAINDLDKELDHLKN 374
           Y+LPHPLQYKIIVRIHTTSQSSPMQAYNQAINDLDKELDHLK+
Sbjct: 61  YRLPHPLQYKIIVRIHTTSQSSPMQAYNQAINDLDKELDHLKS 103


>gb|AFK46555.1| unknown [Lotus japonicus]
          Length = 116

 Score =  204 bits (520), Expect = 7e-51
 Identities = 99/103 (96%), Positives = 101/103 (98%)
 Frame = +3

Query: 66  MNAPDRYERFVVPEGTKKVSYERDTKIINAASFTIEREDHTIGNIVRMQLHRDENVLFAG 245
           MNAPDRYERFVVPEGTKKVSYERDTKIINAASFTIEREDHTIGNI+RMQLHRD NVLFAG
Sbjct: 1   MNAPDRYERFVVPEGTKKVSYERDTKIINAASFTIEREDHTIGNILRMQLHRDPNVLFAG 60

Query: 246 YKLPHPLQYKIIVRIHTTSQSSPMQAYNQAINDLDKELDHLKN 374
           YKLPHPLQYKIIVRIHT SQSSPMQAYNQ+INDLDKELDHLKN
Sbjct: 61  YKLPHPLQYKIIVRIHTASQSSPMQAYNQSINDLDKELDHLKN 103