BLASTX nr result

ID: Angelica23_contig00014015 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica23_contig00014015
         (392 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002866281.1| hypothetical protein ARALYDRAFT_358079 [Arab...   116   2e-24
ref|NP_200669.1| putative PHD finger transcription factor [Arabi...   113   2e-23
dbj|BAA97331.1| unnamed protein product [Arabidopsis thaliana]        113   2e-23
ref|XP_002278840.2| PREDICTED: uncharacterized protein LOC100243...   110   2e-22
ref|XP_002306779.1| predicted protein [Populus trichocarpa] gi|2...   108   4e-22

>ref|XP_002866281.1| hypothetical protein ARALYDRAFT_358079 [Arabidopsis lyrata subsp.
           lyrata] gi|297312116|gb|EFH42540.1| hypothetical protein
           ARALYDRAFT_358079 [Arabidopsis lyrata subsp. lyrata]
          Length = 1047

 Score =  116 bits (291), Expect = 2e-24
 Identities = 58/129 (44%), Positives = 76/129 (58%)
 Frame = +1

Query: 1   KKGKIAYDGIRCDCCEEIFTVSDFEVHNIGTRCQPSVNIWVLNDKSSKSLHEFQSLHECQ 180
           K+GK+  +GI+C CC  IFT+S FEVH  G  C+ + NI+         L + +SL ECQ
Sbjct: 627 KEGKLTREGIKCSCCRRIFTISGFEVHANGGSCRAAANIF---------LDDGRSLLECQ 677

Query: 181 MKLRRNIIXXXXXXXXXXXXXYQNKDDDICSVCHSWGQLICCDGCPSAFHECCLGLKEVP 360
           ++                    Q ++D ICSVCH  G+LI CDGCPSAFH  CLGL+EVP
Sbjct: 678 VEAYETR-KKAQPPDILKMKLRQGENDVICSVCHYGGKLILCDGCPSAFHANCLGLEEVP 736

Query: 361 GGNWYCPSC 387
            G+W+C SC
Sbjct: 737 DGDWFCESC 745


>ref|NP_200669.1| putative PHD finger transcription factor [Arabidopsis thaliana]
           gi|332009693|gb|AED97076.1| putative PHD finger
           transcription factor [Arabidopsis thaliana]
          Length = 1065

 Score =  113 bits (282), Expect = 2e-23
 Identities = 54/129 (41%), Positives = 75/129 (58%)
 Frame = +1

Query: 1   KKGKIAYDGIRCDCCEEIFTVSDFEVHNIGTRCQPSVNIWVLNDKSSKSLHEFQSLHECQ 180
           K+GK+  +GI+C CC  +FT++ FEVH  G  C  + NI+         L + +SL ECQ
Sbjct: 618 KEGKLTREGIKCSCCRRVFTINGFEVHANGASCSGAANIF---------LDDGRSLLECQ 668

Query: 181 MKLRRNIIXXXXXXXXXXXXXYQNKDDDICSVCHSWGQLICCDGCPSAFHECCLGLKEVP 360
           ++  +                 Q ++D  CSVCH  G+LI CDGCPSAFH  CLGL++VP
Sbjct: 669 VEAYKKR-KKAQPPDMLKMKLRQGENDVFCSVCHYGGKLILCDGCPSAFHANCLGLEDVP 727

Query: 361 GGNWYCPSC 387
            G+W+C SC
Sbjct: 728 DGDWFCQSC 736


>dbj|BAA97331.1| unnamed protein product [Arabidopsis thaliana]
          Length = 1095

 Score =  113 bits (282), Expect = 2e-23
 Identities = 54/129 (41%), Positives = 75/129 (58%)
 Frame = +1

Query: 1   KKGKIAYDGIRCDCCEEIFTVSDFEVHNIGTRCQPSVNIWVLNDKSSKSLHEFQSLHECQ 180
           K+GK+  +GI+C CC  +FT++ FEVH  G  C  + NI+         L + +SL ECQ
Sbjct: 627 KEGKLTREGIKCSCCRRVFTINGFEVHANGASCSGAANIF---------LDDGRSLLECQ 677

Query: 181 MKLRRNIIXXXXXXXXXXXXXYQNKDDDICSVCHSWGQLICCDGCPSAFHECCLGLKEVP 360
           ++  +                 Q ++D  CSVCH  G+LI CDGCPSAFH  CLGL++VP
Sbjct: 678 VEAYKKR-KKAQPPDMLKMKLRQGENDVFCSVCHYGGKLILCDGCPSAFHANCLGLEDVP 736

Query: 361 GGNWYCPSC 387
            G+W+C SC
Sbjct: 737 DGDWFCQSC 745


>ref|XP_002278840.2| PREDICTED: uncharacterized protein LOC100243375 [Vitis vinifera]
          Length = 1332

 Score =  110 bits (274), Expect = 2e-22
 Identities = 53/130 (40%), Positives = 76/130 (58%), Gaps = 3/130 (2%)
 Frame = +1

Query: 7    GKIAYDGIRCDCCEEIFTVSDFEVHNIGTRCQPSVNIWVLNDKSSKSLHEFQSLHECQMK 186
            G+I  DGI+C CC+E+F++S FE H   +  + + NI+         L + +SL ECQM+
Sbjct: 843  GRITRDGIKCSCCQEVFSLSRFEAHAGSSYHRSAANIF---------LEDGRSLLECQMQ 893

Query: 187  LRRNIIXXXXXXXXXXXXXYQNK---DDDICSVCHSWGQLICCDGCPSAFHECCLGLKEV 357
            + R+I                 +   +D ICSVCH  G L+ CD CPS+FH+ CLGLK +
Sbjct: 894  IIRDITGKGFTKESFSRKKSNERHHENDHICSVCHYGGDLVLCDHCPSSFHKSCLGLKTL 953

Query: 358  PGGNWYCPSC 387
            P G+W+CPSC
Sbjct: 954  PEGDWFCPSC 963


>ref|XP_002306779.1| predicted protein [Populus trichocarpa] gi|222856228|gb|EEE93775.1|
           predicted protein [Populus trichocarpa]
          Length = 392

 Score =  108 bits (270), Expect = 4e-22
 Identities = 53/129 (41%), Positives = 66/129 (51%)
 Frame = +1

Query: 4   KGKIAYDGIRCDCCEEIFTVSDFEVHNIGTRCQPSVNIWVLNDKSSKSLHEFQSLHECQM 183
           KGKI  DGI+CDCC E F +SDFE H     CQP  NI++ N  S         L  CQ+
Sbjct: 11  KGKITTDGIQCDCCGETFAISDFEAHAGSKSCQPLKNIFLENGPS---------LLHCQL 61

Query: 184 KLRRNIIXXXXXXXXXXXXXYQNKDDDICSVCHSWGQLICCDGCPSAFHECCLGLKEVPG 363
           +                    Q+ +DD C +C   G LICCD CPS FH+ CL +K++P 
Sbjct: 62  ESWHRQDESDRKGFHFVDIDGQDPNDDTCGICGDGGNLICCDSCPSTFHQSCLEIKKLPS 121

Query: 364 GNWYCPSCS 390
           G W C  CS
Sbjct: 122 GVWNCTYCS 130


Top